FFCP PHASE1:Hg19::chrX:153627352..153627373,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6134 | |EntrezGene=6134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10298 | |HGNC=10298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-305bp_to_uc004fkq.1_5end | |association_with_transcript=-305bp_to_uc004fkq.1_5end | ||
|cluster_id=chrX:153627352..153627373,+ | |||
|description=CAGE_peak_5_at_RPL10_5end | |description=CAGE_peak_5_at_RPL10_5end | ||
|id=chrX:153627352..153627373,+ | |id=chrX:153627352..153627373,+ | ||
|ontology_enrichment_celltype=CL:0000548!9.57e-13!679;CL:0000004!9.57e-13!679;CL:0000255!9.57e-13!679;CL:0000012!5.24e-12!682;CL:0000055!6.73e-12!180;CL:0000003!1.55e-11!722;CL:0000222!1.40e-10!119;CL:0000192!1.48e-10!42;CL:0000514!1.48e-10!42;CL:0000680!1.83e-10!57;CL:0000056!1.83e-10!57;CL:0000355!1.83e-10!57;CL:0000220!2.18e-09!246;CL:0000359!2.43e-09!32;CL:0000187!4.43e-09!54;CL:0002321!4.71e-09!248;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60;CL:0000144!1.26e-08!625;CL:0002371!6.87e-08!591;CL:0000183!1.24e-07!59 | |ontology_enrichment_celltype=CL:0000548!9.57e-13!679;CL:0000004!9.57e-13!679;CL:0000255!9.57e-13!679;CL:0000012!5.24e-12!682;CL:0000055!6.73e-12!180;CL:0000003!1.55e-11!722;CL:0000222!1.40e-10!119;CL:0000192!1.48e-10!42;CL:0000514!1.48e-10!42;CL:0000680!1.83e-10!57;CL:0000056!1.83e-10!57;CL:0000355!1.83e-10!57;CL:0000220!2.18e-09!246;CL:0000359!2.43e-09!32;CL:0000187!4.43e-09!54;CL:0002321!4.71e-09!248;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60;CL:0000144!1.26e-08!625;CL:0002371!6.87e-08!591;CL:0000183!1.24e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.23e-11;32!CL:0002595;7.13e-08;5!CL:0000192;1.10e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.59e-11,32;CL:0000192,2.45e-09,43;CL:0000514,2.45e-09,43;CL:0002595,1.78e-08,5;CL:0000222,3.20e-08,121;CL:0000680,3.70e-08,58;CL:0000056,3.70e-08,58;CL:0000355,3.70e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.10e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.73e-11!42;UBERON:0003509!7.73e-11!42;UBERON:0004572!7.73e-11!42;UBERON:0004573!2.30e-09!33;UBERON:0004571!2.30e-09!33;UBERON:0000914!1.38e-08!83;UBERON:0002329!1.38e-08!83;UBERON:0003077!1.38e-08!83;UBERON:0003059!1.38e-08!83;UBERON:0007282!1.38e-08!83;UBERON:0009618!1.38e-08!83;UBERON:0007285!1.38e-08!83;UBERON:0001134!1.44e-08!61;UBERON:0002036!1.44e-08!61;UBERON:0003082!1.44e-08!61;UBERON:0000486!3.93e-08!82;UBERON:0002385!5.81e-08!63;UBERON:0001015!5.81e-08!63;UBERON:0000383!5.81e-08!63;UBERON:0001981!1.11e-07!60;UBERON:0007500!1.11e-07!60;UBERON:0004537!1.11e-07!60;UBERON:0006965!1.11e-07!60;UBERON:0004290!1.62e-07!70;UBERON:0002049!2.11e-07!79;UBERON:0007798!2.11e-07!79;UBERON:0000055!2.94e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.29e-08;42!UBERON:0003509;3.29e-08;42!UBERON:0004572;3.29e-08;42!UBERON:0003834;7.13e-08;5!UBERON:0001533;7.13e-08;5!UBERON:0004573;7.77e-07;33!UBERON:0004571;7.77e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.59e-11,42;UBERON:0003509,7.59e-11,42;UBERON:0004572,7.59e-11,42;UBERON:0004573,1.21e-08,33;UBERON:0004571,1.21e-08,33;UBERON:0003834,1.78e-08,5;UBERON:0001533,1.78e-08,5;UBERON:0007500,8.00e-08,59;UBERON:0001981,8.00e-08,59;UBERON:0004537,8.00e-08,59;UBERON:0006965,8.00e-08,59;UBERON:0001134,3.04e-07,62;UBERON:0002036,3.04e-07,62;UBERON:0003082,3.04e-07,62;UBERON:0000486,4.53e-07,83;UBERON:0002049,5.64e-07,78;UBERON:0007798,5.64e-07,78;UBERON:0002329,5.70e-07,71;UBERON:0003059,5.70e-07,71;UBERON:0007282,5.70e-07,71;UBERON:0004290,5.70e-07,71;UBERON:0009618,5.70e-07,71;UBERON:0004872,6.40e-07,83;UBERON:0002385,7.79e-07,64;UBERON:0001015,7.79e-07,64;UBERON:0000383,7.79e-07,64;UBERON:0003077,8.70e-07,72;UBERON:0007285,8.70e-07,72 | |||
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|phase1_expression=2.18014055124668,1.2846031433459,1.40954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,1.26343974685366,0.522371256399677,0.491467873003018,1.39560233594486,0.655324116390517,0,0.247532705920093,0.331397375727916,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.152826811495903,0.492603536699674,0.393553906568396,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.542270404062111,0.284338464974843,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.336985893439485,0.300353785683013,0.16072558669708,0,0.79566670879636,0.365328307529268,1.75996244461323,0,0,0.853460445133014,0.800791974072025,0,0,0,1.1384259382189,0,0,0,0,0,0.196709770113833,0.786021525498329,0.822405995998037,0.501559486172034,0.651844533267181,0.473447805734733,0,1.00269411196656,0.589211814949674,0.221533894583621,0.812411591295047,1.5370958367081,0.910415432919148,0.328875809207352,0.829050053357545,0.289803085735052,0.14828656316206,0.535081656179426,3.1360657141493,0.906474741580529,0.383220493601921,1.03088233644789,1.01207876807801,0,1.30216690771284,0,0,0.383959833463255,0,0.473554504088034,0,0.80642697289893,0.534880391567015,1.01377082717959,0,0,0.767175371061182,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0.953962497221368,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0.419499436209906,1.10047216776027,0.417989933073621,1.29208379584664,0,0.33472061276467,0.402829317109147,2.28081631715554,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0,1.53316637465883,0,0.366403487860815,0,0,1.74437620857014,0.496971951695318,1.64619665163954,4.10468460520978,0.573673241497627,1.06400514659507,0.560677600142307,1.06748995729705,1.72667283892012,0.311211035399766,0.134710672069688,0.490385709340376,0.756787138224657,0,0,0.312160076830321,1.71141546463335,1.19558944441441,0.117434498643765,0.485618833104395,0.140450806702248,0.816616685019573,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,1.22595118319608,0.45071417671979,1.24775401476023,0.179389635688862,0.213557388818567,0.211931901159562,1.50045548042201,0.412210116953756,0.515281080091258,0.558350568994769,0.506328996723799,0.876933046450788,0.757301322732344,0.276149695926898,0.323292113637624,1.42003837006646,0.302256294682921,0,0.966304265816484,0,1.72082757233402,0,0.132529768321485,0.116193942869518,0,0.504641701751257,0,0,0,0,0.928735856063958,0.721879481669586,0.946454400318751,1.01150814046861,0.723033089650446,0.661763836394364,0.871517776369625,1.18635309555548,0.808987848960987,0.98110732562673,0,0.738155454624648,0,1.6462960453256,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0.768251997860379,0,0.703702806881416,0,0,0,0,0,0.469634776943287,0,0.462985512576611,0.761016608938393,0,0,0,0,0.297262324577456,2.81201501960331,1.51183915378974,1.27597587518148,0.358234090811393,0,0.383382679165211,0.492663237895943,0.264145302039678,0,0.288239906833923,0.12624243342638,1.07946420296687,1.90994212779139,1.17217447210047,1.71072446022705,0.822619941626588,2.10240140490742,0.571652865261156,0,0.43596006883328,0.5867062865676,2.06834745212444,0,0,0.531876233169741,2.08014873822732,1.28603687131071,0,1.0656887160644,0.428933980974443,2.17048642156577,0,0.65147236858747,0.355391948742546,0,3.31583314765545,5.22920075160176,0.799783929456456,0,0,0,0.479249710983165,0,0,5.64647096003559,1.64381058040307,1.61154866915906,0.560425719967636,0,0.862510299438069,0.513372145118994,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0.831883446123229,1.60586089917446,0.788512075169673,0.702848489956279,1.50473049863859,2.27407504055985,0,1.32845119707087,0.921845842708516,0.434418072340414,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0.496215615637554,1.07423381301644,0.841980283299221,2.17836553734692,1.02341449813341,1.28683136914886,0,0.308419387605311,1.06537035187876,1.23190734020714,0,0.929683027679674,0.120859449591622,2.6065841139427,0.368323955743585,1.60740227430449,1.0925470080403,1.44236856455367,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.647747748306418,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0,0.27470839445503,0.082509499920588,0.574265537996172,0,0,0.290012154876366,0.770243085573222,0.460511024178389,0.551346289938122,0.537101224341368,0.145016693914229,0.511359764496605,0.6232242495271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| ||
|short_description=p5@RPL10 | |short_description=p5@RPL10 | ||
}} | }} |
Latest revision as of 03:02, 20 September 2015
Short description: | p5@RPL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RPL10_5end |
Coexpression cluster: | NA |
Association with transcript: | -305bp_to_uc004fkq.1_5end |
EntrezGene: | RPL10 |
HGNC: | 10298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.59e-11 | 32 |
smooth muscle cell | 2.45e-09 | 43 |
smooth muscle myoblast | 2.45e-09 | 43 |
smooth muscle cell of the subclavian artery | 1.78e-08 | 5 |
mesodermal cell | 3.20e-08 | 121 |
muscle precursor cell | 3.70e-08 | 58 |
myoblast | 3.70e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.70e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 7.59e-11 | 42 |
arterial blood vessel | 7.59e-11 | 42 |
arterial system | 7.59e-11 | 42 |
systemic artery | 1.21e-08 | 33 |
systemic arterial system | 1.21e-08 | 33 |
thoracic segment blood vessel | 1.78e-08 | 5 |
subclavian artery | 1.78e-08 | 5 |
epithelial tube open at both ends | 8.00e-08 | 59 |
blood vessel | 8.00e-08 | 59 |
blood vasculature | 8.00e-08 | 59 |
vascular cord | 8.00e-08 | 59 |
skeletal muscle tissue | 3.04e-07 | 62 |
striated muscle tissue | 3.04e-07 | 62 |
myotome | 3.04e-07 | 62 |
multilaminar epithelium | 4.53e-07 | 83 |
vasculature | 5.64e-07 | 78 |
vascular system | 5.64e-07 | 78 |
somite | 5.70e-07 | 71 |
presomitic mesoderm | 5.70e-07 | 71 |
presumptive segmental plate | 5.70e-07 | 71 |
dermomyotome | 5.70e-07 | 71 |
trunk paraxial mesoderm | 5.70e-07 | 71 |
splanchnic layer of lateral plate mesoderm | 6.40e-07 | 83 |
muscle tissue | 7.79e-07 | 64 |
musculature | 7.79e-07 | 64 |
musculature of body | 7.79e-07 | 64 |
paraxial mesoderm | 8.70e-07 | 72 |
presumptive paraxial mesoderm | 8.70e-07 | 72 |