FFCP PHASE1:Hg19::chr6:89791620..89791632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10957 | |EntrezGene=10957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17278 | |HGNC=17278 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc003pmx.2_5end | |association_with_transcript=65bp_to_uc003pmx.2_5end | ||
|cluster_id=chr6:89791620..89791632,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_22_at_PNRC1_5end | |description=CAGE_peak_22_at_PNRC1_5end | ||
|id=chr6:89791620..89791632,+ | |id=chr6:89791620..89791632,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.13e-39!45;CL:0002057!5.61e-37!42;CL:0000766!9.30e-33!76;CL:0000557!3.55e-30!71;CL:0000738!2.35e-29!140;CL:0002009!3.92e-29!65;CL:0000839!2.71e-27!70;CL:0002194!8.02e-27!63;CL:0000576!8.02e-27!63;CL:0000040!8.02e-27!63;CL:0000559!8.02e-27!63;CL:0000763!4.75e-25!112;CL:0000049!4.75e-25!112;CL:0000037!9.06e-23!172;CL:0000566!9.06e-23!172;CL:0000988!3.56e-21!182;CL:0002087!1.23e-20!119;CL:0002032!2.09e-20!165;CL:0000837!2.09e-20!165;CL:0002031!3.77e-20!124;CL:0002393!5.36e-14!9;CL:0002397!5.36e-14!9;CL:0000134!3.33e-11!358;CL:0002320!1.53e-10!365;CL:0000219!1.34e-09!390;CL:0000034!7.32e-08!444;CL:0000048!1.54e-07!430;CL:0000723!3.96e-07!436 | |ontology_enrichment_celltype=CL:0000860!2.13e-39!45;CL:0002057!5.61e-37!42;CL:0000766!9.30e-33!76;CL:0000557!3.55e-30!71;CL:0000738!2.35e-29!140;CL:0002009!3.92e-29!65;CL:0000839!2.71e-27!70;CL:0002194!8.02e-27!63;CL:0000576!8.02e-27!63;CL:0000040!8.02e-27!63;CL:0000559!8.02e-27!63;CL:0000763!4.75e-25!112;CL:0000049!4.75e-25!112;CL:0000037!9.06e-23!172;CL:0000566!9.06e-23!172;CL:0000988!3.56e-21!182;CL:0002087!1.23e-20!119;CL:0002032!2.09e-20!165;CL:0000837!2.09e-20!165;CL:0002031!3.77e-20!124;CL:0002393!5.36e-14!9;CL:0002397!5.36e-14!9;CL:0000134!3.33e-11!358;CL:0002320!1.53e-10!365;CL:0000219!1.34e-09!390;CL:0000034!7.32e-08!444;CL:0000048!1.54e-07!430;CL:0000723!3.96e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.28e-39;6!CL:0002397;1.28e-39;6!CL:0000860;2.15e-39;33!CL:0002057;2.15e-39;33!CL:0000576;2.00e-33;48!CL:0000473;7.99e-27;39!CL:0000234;7.99e-27;39!CL:0000766;1.07e-25;69!CL:0000771;2.80e-15;2!CL:0000094;3.74e-14;8!CL:0000763;1.25e-12;100!CL:0002087;2.20e-12;104!CL:0000081;2.50e-10;11!CL:0000775;4.79e-10;3!CL:0000738;9.30e-09;136!CL:0002553;7.59e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-66,42;CL:0002057,3.83e-66,42;CL:0000473,2.22e-57,48;CL:0000234,2.22e-57,48;CL:0000766,4.07e-53,72;CL:0002009,6.20e-48,61;CL:0002194,4.16e-45,59;CL:0000576,4.16e-45,59;CL:0000040,4.16e-45,59;CL:0000559,4.16e-45,59;CL:0000557,2.44e-43,67;CL:0000839,5.64e-40,66;CL:0000763,4.28e-37,108;CL:0000049,4.28e-37,108;CL:0000738,4.96e-31,136;CL:0002393,2.42e-26,9;CL:0002397,2.42e-26,9;CL:0000037,2.95e-24,168;CL:0002087,1.21e-23,115;CL:0002032,1.96e-23,161;CL:0000837,1.96e-23,161;CL:0000988,8.67e-23,177;CL:0002031,1.63e-22,120;CL:0000771,2.80e-15,2;CL:0000094,3.51e-14,8;CL:0000081,2.39e-10,11;CL:0000775,4.38e-10,3;CL:0000134,5.92e-10,354;CL:0002320,1.16e-09,361;CL:0000034,1.08e-08,441;CL:0000219,1.23e-08,386;CL:0002553,6.63e-08,1;CL:0000048,2.25e-07,427;CL:0000723,3.35e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-45;42!CL:0000049;9.79e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.33e-26!86;UBERON:0002371!3.66e-25!80;UBERON:0002390!1.91e-22!102;UBERON:0003061!1.91e-22!102;UBERON:0004765!2.11e-21!101;UBERON:0001434!2.11e-21!101;UBERON:0002193!4.46e-19!112;UBERON:0002405!5.22e-16!115;UBERON:0002384!4.39e-10!375;UBERON:0002204!9.97e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.70e-38,76;UBERON:0001474,9.40e-35,82;UBERON:0004765,2.50e-31,90;UBERON:0002390,2.73e-31,98;UBERON:0003061,2.73e-31,98;UBERON:0002405,3.40e-30,93;UBERON:0002193,5.07e-28,108;UBERON:0001434,8.25e-28,100;UBERON:0002204,5.08e-15,167;UBERON:0003081,6.41e-13,203;UBERON:0002384,2.89e-09,371;UBERON:0000926,9.28e-07,315;UBERON:0004120,9.28e-07,315;UBERON:0006603,9.28e-07,315 | |||
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|short_description=p22@PNRC1 | |short_description=p22@PNRC1 | ||
}} | }} |
Latest revision as of 03:02, 20 September 2015
Short description: | p22@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PNRC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 65bp_to_uc003pmx.2_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.70e-38 | 76 |
bone element | 9.40e-35 | 82 |
skeletal element | 2.50e-31 | 90 |
hematopoietic system | 2.73e-31 | 98 |
blood island | 2.73e-31 | 98 |
immune system | 3.40e-30 | 93 |
hemolymphoid system | 5.07e-28 | 108 |
skeletal system | 8.25e-28 | 100 |
musculoskeletal system | 5.08e-15 | 167 |
lateral plate mesoderm | 6.41e-13 | 203 |
connective tissue | 2.89e-09 | 371 |
mesoderm | 9.28e-07 | 315 |
mesoderm-derived structure | 9.28e-07 | 315 |
presumptive mesoderm | 9.28e-07 | 315 |