FFCP PHASE1:Hg19::chr17:38804061..38804112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6605 | |EntrezGene=6605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11109 | |HGNC=11109 | ||
|TSSclassifier=strong | |||
|UniProt=C0IMW5,B4DGM3,Q969G3 | |UniProt=C0IMW5,B4DGM3,Q969G3 | ||
|association_with_transcript=0bp_to_ENST00000377808,ENST00000431889,ENST00000469334,ENST00000474246,ENST00000478349,ENST00000481231,ENST00000493660,NM_003079,uc002hux.2,uc002huy.2,uc002huz.1,uc002hva.2,uc010wff.1,uc010wfg.1,uc010wfh.1,uc010wfi.1_5end | |association_with_transcript=0bp_to_ENST00000377808,ENST00000431889,ENST00000469334,ENST00000474246,ENST00000478349,ENST00000481231,ENST00000493660,NM_003079,uc002hux.2,uc002huy.2,uc002huz.1,uc002hva.2,uc010wff.1,uc010wfg.1,uc010wfh.1,uc010wfi.1_5end | ||
|cluster_id=chr17:38804061..38804112,- | |||
|description=CAGE_peak_1_at_SMARCE1_5end | |description=CAGE_peak_1_at_SMARCE1_5end | ||
|id=chr17:38804061..38804112,- | |id=chr17:38804061..38804112,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.70e-16!235;DOID:14566!2.37e-15!239;DOID:0050687!2.71e-11!143;DOID:305!7.55e-08!106;DOID:0050686!6.67e-07!137 | |ontology_enrichment_disease=DOID:162!9.70e-16!235;DOID:14566!2.37e-15!239;DOID:0050687!2.71e-11!143;DOID:305!7.55e-08!106;DOID:0050686!6.67e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.70e-16,235;DOID:14566,2.37e-15,239;DOID:0050687,2.71e-11,143;DOID:305,7.55e-08,106;DOID:0050686,6.67e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@SMARCE1 | |short_description=p1@SMARCE1 | ||
}} | }} |
Latest revision as of 02:56, 20 September 2015
Short description: | p1@SMARCE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377808, ENST00000431889, ENST00000469334, ENST00000474246, ENST00000478349, ENST00000481231, ENST00000493660, NM_003079, uc002hux.2, uc002huy.2, uc002huz.1, uc002hva.2, uc010wff.1, uc010wfg.1, uc010wfh.1, uc010wfi.1_5end |
EntrezGene: | SMARCE1 |
HGNC: | 11109 |
UniProt: | C0IMW5B4DGM3Q969G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 9.70e-16 | 235 |
disease of cellular proliferation | 2.37e-15 | 239 |
cell type cancer | 2.71e-11 | 143 |
carcinoma | 7.55e-08 | 106 |
organ system cancer | 6.67e-07 | 137 |