FFCP PHASE1:Hg19::chr12:6879079..6879124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5763 | |EntrezGene=5763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9629 | |HGNC=9629 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-434bp_to_DQ894125_5end | |association_with_transcript=-434bp_to_DQ894125_5end | ||
|cluster_id=chr12:6879079..6879124,+ | |||
|description=CAGE_peak_10_at_PTMS_5end | |description=CAGE_peak_10_at_PTMS_5end | ||
|id=chr12:6879079..6879124,+ | |id=chr12:6879079..6879124,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.23e-15!248;CL:0000220!7.67e-15!246;CL:0000055!1.24e-09!180;CL:0000066!1.08e-08!254;CL:0000133!4.89e-08!59;CL:0000222!5.15e-08!119;CL:0000221!6.38e-07!71 | |ontology_enrichment_celltype=CL:0002321!4.23e-15!248;CL:0000220!7.67e-15!246;CL:0000055!1.24e-09!180;CL:0000066!1.08e-08!254;CL:0000133!4.89e-08!59;CL:0000222!5.15e-08!119;CL:0000221!6.38e-07!71 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.79e-14,250;CL:0000222,6.00e-08,121;CL:0000066,1.12e-07,253;CL:0000133,1.42e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.49e-16!659;UBERON:0000475!2.89e-13!365;UBERON:0000481!2.62e-12!347;UBERON:0000119!4.03e-12!312;UBERON:0000483!6.26e-12!309;UBERON:0000467!1.71e-11!625;UBERON:0000480!2.25e-11!626;UBERON:0000477!2.88e-11!286;UBERON:0000922!9.70e-10!612;UBERON:0000064!1.88e-09!219;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0000924!2.46e-08!173;UBERON:0006601!2.46e-08!173;UBERON:0000025!2.48e-08!194;UBERON:0000923!2.56e-08!604;UBERON:0005291!2.56e-08!604;UBERON:0006598!2.56e-08!604;UBERON:0002532!2.56e-08!604;UBERON:0004121!3.30e-08!169;UBERON:0004111!5.44e-08!241;UBERON:0002100!5.07e-07!216 | |ontology_enrichment_uberon=UBERON:0000468!4.49e-16!659;UBERON:0000475!2.89e-13!365;UBERON:0000481!2.62e-12!347;UBERON:0000119!4.03e-12!312;UBERON:0000483!6.26e-12!309;UBERON:0000467!1.71e-11!625;UBERON:0000480!2.25e-11!626;UBERON:0000477!2.88e-11!286;UBERON:0000922!9.70e-10!612;UBERON:0000064!1.88e-09!219;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0000924!2.46e-08!173;UBERON:0006601!2.46e-08!173;UBERON:0000025!2.48e-08!194;UBERON:0000923!2.56e-08!604;UBERON:0005291!2.56e-08!604;UBERON:0006598!2.56e-08!604;UBERON:0002532!2.56e-08!604;UBERON:0004121!3.30e-08!169;UBERON:0004111!5.44e-08!241;UBERON:0002100!5.07e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.85e-10,309;UBERON:0000483,4.59e-10,306;UBERON:0010314,7.64e-08,132;UBERON:0004121,3.35e-07,171;UBERON:0000924,3.35e-07,171;UBERON:0006601,3.35e-07,171;UBERON:0000025,7.30e-07,192;UBERON:0000922,8.37e-07,592 | |||
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| ||
|short_description=p10@PTMS | |short_description=p10@PTMS | ||
}} | }} |
Latest revision as of 02:51, 20 September 2015
Short description: | p10@PTMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PTMS_5end |
Coexpression cluster: | NA |
Association with transcript: | -434bp_to_DQ894125_5end |
EntrezGene: | PTMS |
HGNC: | 9629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.79e-14 | 250 |
mesodermal cell | 6.00e-08 | 121 |
epithelial cell | 1.12e-07 | 253 |
neurectodermal cell | 1.42e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.85e-10 | 309 |
epithelium | 4.59e-10 | 306 |
structure with developmental contribution from neural crest | 7.64e-08 | 132 |
ectoderm-derived structure | 3.35e-07 | 171 |
ectoderm | 3.35e-07 | 171 |
presumptive ectoderm | 3.35e-07 | 171 |
tube | 7.30e-07 | 192 |
embryo | 8.37e-07 | 592 |