FFCP PHASE1:Hg19::chr18:60190226..60190314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54877 | |EntrezGene=54877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22916 | |HGNC=22916 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0B9,Q9BRD4 | |UniProt=Q9C0B9,Q9BRD4 | ||
|association_with_transcript=-343bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | |association_with_transcript=-343bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | ||
|cluster_id=chr18:60190226..60190314,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_ZCCHC2_5end | |description=CAGE_peak_1_at_ZCCHC2_5end | ||
|id=chr18:60190226..60190314,+ | |id=chr18:60190226..60190314,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.19e-35!140;CL:0000037!1.96e-33!172;CL:0000566!1.96e-33!172;CL:0002032!2.34e-31!165;CL:0000837!2.34e-31!165;CL:0000988!1.65e-30!182;CL:0000766!6.19e-30!76;CL:0002031!1.08e-28!124;CL:0000763!3.51e-27!112;CL:0000049!3.51e-27!112;CL:0002087!6.14e-27!119;CL:0000557!2.17e-26!71;CL:0000839!1.13e-25!70;CL:0002057!1.34e-24!42;CL:0002009!2.18e-24!65;CL:0002194!2.35e-23!63;CL:0000576!2.35e-23!63;CL:0000040!2.35e-23!63;CL:0000559!2.35e-23!63;CL:0000860!2.74e-22!45;CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18 | |ontology_enrichment_celltype=CL:0000738!4.19e-35!140;CL:0000037!1.96e-33!172;CL:0000566!1.96e-33!172;CL:0002032!2.34e-31!165;CL:0000837!2.34e-31!165;CL:0000988!1.65e-30!182;CL:0000766!6.19e-30!76;CL:0002031!1.08e-28!124;CL:0000763!3.51e-27!112;CL:0000049!3.51e-27!112;CL:0002087!6.14e-27!119;CL:0000557!2.17e-26!71;CL:0000839!1.13e-25!70;CL:0002057!1.34e-24!42;CL:0002009!2.18e-24!65;CL:0002194!2.35e-23!63;CL:0000576!2.35e-23!63;CL:0000040!2.35e-23!63;CL:0000559!2.35e-23!63;CL:0000860!2.74e-22!45;CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-18;33!CL:0002057;1.01e-18;33!CL:0000473;1.29e-16;39!CL:0000234;1.29e-16;39!CL:0000576;1.51e-16;48!CL:0000766;2.27e-14;69!CL:0002087;1.31e-09;104!CL:0000763;2.28e-08;100!CL:0000738;3.49e-08;136!CL:0000791;2.68e-07;18!CL:0000789;2.68e-07;18!CL:0002419;2.68e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.62e-37,136;CL:0000037,3.83e-35,168;CL:0002032,4.84e-33,161;CL:0000837,4.84e-33,161;CL:0000766,8.58e-33,72;CL:0000988,5.39e-32,177;CL:0002031,1.20e-30,120;CL:0000763,3.93e-29,108;CL:0000049,3.93e-29,108;CL:0000557,3.99e-29,67;CL:0002087,7.33e-29,115;CL:0000839,2.20e-28,66;CL:0002009,3.76e-27,61;CL:0002194,4.30e-26,59;CL:0000576,4.30e-26,59;CL:0000040,4.30e-26,59;CL:0000559,4.30e-26,59;CL:0000473,1.01e-25,48;CL:0000234,1.01e-25,48;CL:0000860,1.31e-24,42;CL:0002057,1.31e-24,42;CL:0000791,2.66e-07,18;CL:0000789,2.66e-07,18;CL:0002420,2.66e-07,18;CL:0002419,2.66e-07,18;CL:0000790,2.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-18;42!CL:0000049;1.39e-08;108!CL:0000790;2.68e-07;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-29!115;UBERON:0002390!2.62e-26!102;UBERON:0003061!2.62e-26!102;UBERON:0002193!1.88e-24!112;UBERON:0002405!1.14e-20!115;UBERON:0002371!3.20e-20!80;UBERON:0001474!1.57e-17!86;UBERON:0004765!3.25e-12!101;UBERON:0001434!3.25e-12!101;UBERON:0003081!3.23e-08!216;UBERON:0001049!4.79e-08!57;UBERON:0005068!4.79e-08!57;UBERON:0006241!4.79e-08!57;UBERON:0007135!4.79e-08!57;UBERON:0003080!7.00e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-29!115;UBERON:0002390!2.62e-26!102;UBERON:0003061!2.62e-26!102;UBERON:0002193!1.88e-24!112;UBERON:0002405!1.14e-20!115;UBERON:0002371!3.20e-20!80;UBERON:0001474!1.57e-17!86;UBERON:0004765!3.25e-12!101;UBERON:0001434!3.25e-12!101;UBERON:0003081!3.23e-08!216;UBERON:0001049!4.79e-08!57;UBERON:0005068!4.79e-08!57;UBERON:0006241!4.79e-08!57;UBERON:0007135!4.79e-08!57;UBERON:0003080!7.00e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.37e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.34e-29,114;UBERON:0002390,1.97e-28,98;UBERON:0003061,1.97e-28,98;UBERON:0002193,2.32e-26,108;UBERON:0002371,2.56e-22,76;UBERON:0002405,4.71e-22,93;UBERON:0001474,2.59e-19,82;UBERON:0004765,4.47e-15,90;UBERON:0001434,5.21e-12,100;UBERON:0003081,2.88e-09,203;UBERON:0001049,1.09e-07,56;UBERON:0005068,1.09e-07,56;UBERON:0006241,1.09e-07,56;UBERON:0007135,1.09e-07,56;UBERON:0000073,2.87e-07,53;UBERON:0002616,2.87e-07,53 | |||
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| ||
|short_description=p1@ZCCHC2 | |short_description=p1@ZCCHC2 | ||
}} | }} |
Latest revision as of 02:42, 20 September 2015
Short description: | p1@ZCCHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZCCHC2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -343bp_to_ENST00000269499, NM_017742, uc002lio.2, uc002lip.3_5end |
EntrezGene: | ZCCHC2 |
HGNC: | 22916 |
UniProt: | Q9C0B9Q9BRD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.62e-37 | 136 |
hematopoietic stem cell | 3.83e-35 | 168 |
hematopoietic oligopotent progenitor cell | 4.84e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.84e-33 | 161 |
myeloid leukocyte | 8.58e-33 | 72 |
hematopoietic cell | 5.39e-32 | 177 |
hematopoietic lineage restricted progenitor cell | 1.20e-30 | 120 |
myeloid cell | 3.93e-29 | 108 |
common myeloid progenitor | 3.93e-29 | 108 |
granulocyte monocyte progenitor cell | 3.99e-29 | 67 |
nongranular leukocyte | 7.33e-29 | 115 |
myeloid lineage restricted progenitor cell | 2.20e-28 | 66 |
macrophage dendritic cell progenitor | 3.76e-27 | 61 |
monopoietic cell | 4.30e-26 | 59 |
monocyte | 4.30e-26 | 59 |
monoblast | 4.30e-26 | 59 |
promonocyte | 4.30e-26 | 59 |
defensive cell | 1.01e-25 | 48 |
phagocyte | 1.01e-25 | 48 |
classical monocyte | 1.31e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-24 | 42 |
mature alpha-beta T cell | 2.66e-07 | 18 |
alpha-beta T cell | 2.66e-07 | 18 |
immature T cell | 2.66e-07 | 18 |
mature T cell | 2.66e-07 | 18 |
immature alpha-beta T cell | 2.66e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.34e-29 | 114 |
hematopoietic system | 1.97e-28 | 98 |
blood island | 1.97e-28 | 98 |
hemolymphoid system | 2.32e-26 | 108 |
bone marrow | 2.56e-22 | 76 |
immune system | 4.71e-22 | 93 |
bone element | 2.59e-19 | 82 |
skeletal element | 4.47e-15 | 90 |
skeletal system | 5.21e-12 | 100 |
lateral plate mesoderm | 2.88e-09 | 203 |
neural tube | 1.09e-07 | 56 |
neural rod | 1.09e-07 | 56 |
future spinal cord | 1.09e-07 | 56 |
neural keel | 1.09e-07 | 56 |
regional part of nervous system | 2.87e-07 | 53 |
regional part of brain | 2.87e-07 | 53 |