FFCP PHASE1:Hg19::chr14:50359737..50359748,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:50359737..50359748,+ to FFCP PHASE1:Hg19::chr14:50359737..50359748,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=382 | |EntrezGene=382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=659 | |HGNC=659 | ||
|TSSclassifier=strong | |||
|UniProt=P62330,Q6FGZ2 | |UniProt=P62330,Q6FGZ2 | ||
|association_with_transcript=1bp_to_NM_001663,uc001wxg.3_5end | |||
|cluster_id=chr14:50359737..50359748,+ | |||
|description=CAGE_peak_5_at_ARF6_5end | |||
|id=chr14:50359737..50359748,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.19e-20!679;CL:0000004!3.19e-20!679;CL:0000255!3.19e-20!679;CL:0000012!1.11e-19!682;CL:0000063!5.15e-15!578;CL:0002371!1.45e-11!591;CL:0000144!3.61e-11!625;CL:0000003!4.60e-11!722;CL:0002009!3.22e-09!65;CL:0000557!5.05e-09!71;CL:0000839!6.68e-09!70;CL:0002194!1.88e-08!63;CL:0000576!1.88e-08!63;CL:0000040!1.88e-08!63;CL:0000559!1.88e-08!63;CL:0002057!3.94e-08!42;CL:0000766!7.59e-08!76;CL:0000860!1.22e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.59e-07;10!CL:1000494;1.59e-07;10!CL:1000449;7.21e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.52e-10,48;CL:0000234,7.52e-10,48;CL:0002009,8.86e-10,61;CL:0000557,1.50e-09,67;CL:0000839,2.01e-09,66;CL:0002194,5.99e-09,59;CL:0000576,5.99e-09,59;CL:0000040,5.99e-09,59;CL:0000559,5.99e-09,59;CL:0000766,9.93e-09,72;CL:0000860,3.05e-08,42;CL:0002057,3.05e-08,42;CL:1000507,1.32e-07,10;CL:1000494,1.32e-07,10;CL:1000449,9.04e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.40e-10!80;UBERON:0001474!1.19e-08!86;UBERON:0000062!1.48e-08!511;UBERON:0004765!4.70e-08!101;UBERON:0001434!4.70e-08!101;UBERON:0000926!1.30e-07!448;UBERON:0004120!1.30e-07!448;UBERON:0006603!1.30e-07!448;UBERON:0002204!3.02e-07!167;UBERON:0004119!5.04e-07!169;UBERON:0000925!5.04e-07!169;UBERON:0006595!5.04e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.59e-07;10!UBERON:0009773;1.59e-07;10!UBERON:0001231;1.59e-07;10!UBERON:0004810;1.59e-07;10!UBERON:0006555;7.21e-07;15!UBERON:0004819;7.21e-07;15!UBERON:0001285;7.21e-07;15!UBERON:0007684;7.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-10,76;UBERON:0001474,1.17e-08,82;UBERON:0004810,1.32e-07,10;UBERON:0004765,1.74e-07,90;UBERON:0001434,2.02e-07,100;UBERON:0002405,5.48e-07,93;UBERON:0004211,9.04e-07,15;UBERON:0009773,9.04e-07,15;UBERON:0001231,9.04e-07,15;UBERON:0001285,9.04e-07,15;UBERON:0007684,9.04e-07,15;UBERON:0004208,9.04e-07,15 | |||
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| ||
|short_description=p5@ARF6 | |||
}} | }} |
Latest revision as of 02:36, 20 September 2015
Short description: | p5@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_NM_001663, uc001wxg.3_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330Q6FGZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.52e-10 | 48 |
phagocyte | 7.52e-10 | 48 |
macrophage dendritic cell progenitor | 8.86e-10 | 61 |
granulocyte monocyte progenitor cell | 1.50e-09 | 67 |
myeloid lineage restricted progenitor cell | 2.01e-09 | 66 |
monopoietic cell | 5.99e-09 | 59 |
monocyte | 5.99e-09 | 59 |
monoblast | 5.99e-09 | 59 |
promonocyte | 5.99e-09 | 59 |
myeloid leukocyte | 9.93e-09 | 72 |
classical monocyte | 3.05e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-08 | 42 |
kidney tubule cell | 1.32e-07 | 10 |
nephron tubule epithelial cell | 1.32e-07 | 10 |
epithelial cell of nephron | 9.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-10 | 76 |
bone element | 1.17e-08 | 82 |
nephron tubule epithelium | 1.32e-07 | 10 |
skeletal element | 1.74e-07 | 90 |
skeletal system | 2.02e-07 | 100 |
immune system | 5.48e-07 | 93 |
nephron epithelium | 9.04e-07 | 15 |
renal tubule | 9.04e-07 | 15 |
nephron tubule | 9.04e-07 | 15 |
nephron | 9.04e-07 | 15 |
uriniferous tubule | 9.04e-07 | 15 |
nephrogenic mesenchyme | 9.04e-07 | 15 |