FFCP PHASE1:Hg19::chr22:36725466..36725487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4627 | |EntrezGene=4627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7579 | |HGNC=7579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-469bp_to_ENST00000463027_5end | |association_with_transcript=-469bp_to_ENST00000463027_5end | ||
|cluster_id=chr22:36725466..36725487,- | |||
|description=CAGE_peak_34_at_MYH9_5end | |description=CAGE_peak_34_at_MYH9_5end | ||
|id=chr22:36725466..36725487,- | |id=chr22:36725466..36725487,- | ||
|ontology_enrichment_celltype=CL:0000066!3.89e-20!254;CL:0002321!1.13e-17!248;CL:0000220!3.20e-17!246;CL:0000548!9.67e-11!679;CL:0000004!9.67e-11!679;CL:0000255!9.67e-11!679;CL:0000012!2.55e-10!682;CL:0002076!5.54e-10!43;CL:0002368!4.57e-09!13;CL:0000223!5.91e-08!59;CL:0000144!5.99e-07!625;CL:0002202!6.76e-07!9;CL:0002632!6.76e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.89e-20!254;CL:0002321!1.13e-17!248;CL:0000220!3.20e-17!246;CL:0000548!9.67e-11!679;CL:0000004!9.67e-11!679;CL:0000255!9.67e-11!679;CL:0000012!2.55e-10!682;CL:0002076!5.54e-10!43;CL:0002368!4.57e-09!13;CL:0000223!5.91e-08!59;CL:0000144!5.99e-07!625;CL:0002202!6.76e-07!9;CL:0002632!6.76e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.51e-08;42!CL:0000244;5.74e-08;4!CL:0000731;5.74e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.00e-13,253;CL:0002076,1.25e-10,42;CL:0002321,5.07e-10,250;CL:0000223,3.70e-08,58;CL:0000244,5.14e-08,4;CL:0000731,5.14e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.10e-08;14!DOID:3910;6.03e-08;2!DOID:3908;6.42e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.25e-08,14;DOID:3910,6.20e-08,2;DOID:3908,6.88e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!9.13e-08!79;UBERON:0007798!9.13e-08!79;UBERON:0001801!3.66e-07!14;UBERON:0001444!8.99e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;1.24e-08;31!UBERON:0000490;5.61e-08;33!UBERON:0004903;6.03e-08;2!UBERON:0002173;6.03e-08;2!UBERON:0002186;6.03e-08;2!UBERON:0007625;2.96e-07;11!UBERON:0000487;9.46e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.20e-08,2;UBERON:0002173,6.20e-08,2;UBERON:0002186,6.20e-08,2;UBERON:0007625,3.89e-07,11;UBERON:0000033,4.18e-07,56;UBERON:0000487,7.93e-07,22 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,1.05506791291381,0.123766352960047,0,0,0,0,0,0.738726348460727,0.612002073732759,0,0.85870796139317,0.273748850145768,0.753255837568817,0,0,0,0.786728553697808,0,0,0.919421224478927,3.31326510656075,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,1.22895262313288,0.665188192387692,1.22968699970376,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0,0,0,0.626984899610432,0,0.35576626268671,0.33472061276467,2.01414658554573,0,1.22031028774085,0.367663080345869,1.62028389576352,0.17859945656816,0,0.112611480483322,4.5994991239765,0.949265659568129,1.64881569537367,0,0,0.872188104285069,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0.560677600142307,2.1349799145941,0.74000264525148,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0,0.567160915800105,1.61450672119976,0,0.635795703478686,1.20036438433761,0.206105058476878,0,0,0.337552664482532,0,1.7670364197088,0.184099797284599,0,0,0.201504196455281,0.339121184620975,1.54608682530637,1.63647672354501,0.860413786167011,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0,0.72995471815166,1.56449532329816,0,0,0,0,0.591534000199219,0.168584690078102,0.723033089650446,0.661763836394364,0,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,1.86575485194663,1.1240175325762,0.703702806881416,0.648119116109707,0,1.03993478527958,1.44331342025273,0.231860809950154,0.939269553886573,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0,1.6798212819886,1.41775097242386,0.716468181622786,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.448524337381443,0,0.2933531432838,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,2.37585561880029,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.24782516918484,0.356857977594324,0.473107245101804,0.117141414992713,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0.391602314925481,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,1.20303882181971,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.385076685522074,1.56869953835371,0,0.844413031143006,1.13733384070897,0,0.647747748306418,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,0.256450125116389,1.31205858279882,0,0.103041011647722,0.915694648183434,0.41254749960294,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0.534192213880424,0.661139661443912,0.576570202095319,1.14851441245126,0.708104465988849,0.929691098594572,1.25924938732256,0,0,0,0,0.74129687641568,0.572499546967965,0.372158369359667,0,0.571890581771475,1.02359116524534,0.42793898803392,0,0.78494864019923,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,2.11300293513511,0,0,0,0,0.66343897524122,0.438450885253763,0,0,2.23201414658974,0.6196469961995,0.281695602532241,0.430234056612155,0.196498082026242,3.5667105148125,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.769776901804097,0.670302275535787,3.26672954583968,0.0941438007767792,1.29151611801369,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,2.27308917445131,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,1.15362711958732,0,0.398495976502139,0,0,3.47713520507326,0,1.24415835064723,0.629078458031288,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0,0.455768223388005,0,0.269272933229316,0.217294743844016,0.31900115973192,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.379119477770928,0.300646838828985,0.207376382794494,0,0.992975867626496,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,1.13176968554523,0.17472666824203,0.171986032471617,0,0,0,0,0,0,1.50746117111426,0.198714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| ||
|short_description=p34@MYH9 | |short_description=p34@MYH9 | ||
}} | }} |
Latest revision as of 02:15, 20 September 2015
Short description: | p34@MYH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_MYH9_5end |
Coexpression cluster: | NA |
Association with transcript: | -469bp_to_ENST00000463027_5end |
EntrezGene: | MYH9 |
HGNC: | 7579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.00e-13 | 253 |
endo-epithelial cell | 1.25e-10 | 42 |
embryonic cell | 5.07e-10 | 250 |
endodermal cell | 3.70e-08 | 58 |
transitional epithelial cell | 5.14e-08 | 4 |
urothelial cell | 5.14e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.20e-08 | 2 |
alveolar duct | 6.20e-08 | 2 |
bronchiole | 6.20e-08 | 2 |
pigment epithelium of eye | 3.89e-07 | 11 |
head | 4.18e-07 | 56 |
simple squamous epithelium | 7.93e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.25e-08 | 14 |
lung adenocarcinoma | 6.20e-08 | 2 |
non-small cell lung carcinoma | 6.88e-07 | 5 |