FFCP PHASE1:Hg19::chr10:96046777..96046788,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128054 | |EntrezGene=100128054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_NR_033969,uc001kjo.1_5end | |association_with_transcript=38bp_to_NR_033969,uc001kjo.1_5end | ||
|cluster_id=chr10:96046777..96046788,- | |||
|coexpression_cluster_id=C1602 | |||
|description=CAGE_peak_4_at_LOC100128054_5end | |description=CAGE_peak_4_at_LOC100128054_5end | ||
|id=chr10:96046777..96046788,- | |id=chr10:96046777..96046788,- | ||
|ontology_enrichment_celltype=CL:0002334!1.87e-11!12;CL:0002615!2.51e-10!3;CL:0002590!6.14e-10!3;CL:0002580!6.91e-10!3;CL:0002579!1.75e-09!3;CL:0002586!2.54e-09!3;CL:0002541!3.99e-09!3;CL:0000325!2.17e-08!39;CL:0005020!8.53e-08!6;CL:0002138!8.53e-08!6;CL:0005022!8.53e-08!6;CL:0002617!1.66e-07!2;CL:0000149!4.44e-07!4;CL:0000136!5.42e-07!15 | |ontology_enrichment_celltype=CL:0002334!1.87e-11!12;CL:0002615!2.51e-10!3;CL:0002590!6.14e-10!3;CL:0002580!6.91e-10!3;CL:0002579!1.75e-09!3;CL:0002586!2.54e-09!3;CL:0002541!3.99e-09!3;CL:0000325!2.17e-08!39;CL:0005020!8.53e-08!6;CL:0002138!8.53e-08!6;CL:0005022!8.53e-08!6;CL:0002617!1.66e-07!2;CL:0000149!4.44e-07!4;CL:0000136!5.42e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.37e-28;3!CL:0002617;8.14e-20;2!CL:0002334;6.15e-19;12!CL:0000136;8.15e-18;13!CL:0002580;2.79e-13;3!CL:0002579;4.29e-13;3!CL:0002590;6.17e-13;3!CL:0000222;1.81e-10;1!CL:0002581;1.81e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.88e-28,3;CL:0002617,8.54e-20,2;CL:0002334,7.02e-19,12;CL:0000136,1.88e-15,15;CL:0002580,3.16e-13,3;CL:0002590,4.29e-13,3;CL:0002579,5.15e-13,3;CL:0002581,1.57e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.45e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.36e-18!6;UBERON:0002358!4.36e-18!6;UBERON:0003684!4.36e-18!6;UBERON:0001178!4.36e-18!6;UBERON:0004457!2.20e-11!12;UBERON:0000042!2.20e-11!12;UBERON:0000966!1.96e-09!5;UBERON:0005388!1.96e-09!5;UBERON:0001802!1.96e-09!5;UBERON:0001781!2.54e-09!3;UBERON:0001782!2.54e-09!3;UBERON:0005424!2.54e-09!3;UBERON:0004923!3.66e-09!57;UBERON:0000476!3.99e-09!3;UBERON:0000920!3.99e-09!3;UBERON:0007625!1.30e-08!11;UBERON:0000970!1.26e-07!20;UBERON:0000310!1.30e-07!10;UBERON:0001456!2.71e-07!21;UBERON:0002104!3.35e-07!21;UBERON:0005406!3.64e-07!2;UBERON:0001443!7.06e-07!11;UBERON:0005631!8.00e-07!14;UBERON:0000158!8.00e-07!14;UBERON:0003124!9.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.51e-38;6!UBERON:0002358;4.51e-38;6!UBERON:0003684;4.51e-38;6!UBERON:0001178;4.51e-38;6!UBERON:0004457;2.16e-25;9!UBERON:0000042;2.16e-25;9!UBERON:0000310;3.82e-15;10!UBERON:0001443;8.69e-14;11!UBERON:0007195;1.30e-10;1!UBERON:0005284;4.07e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.70e-38,6;UBERON:0002358,4.70e-38,6;UBERON:0003684,4.70e-38,6;UBERON:0001178,4.70e-38,6;UBERON:0004457,5.01e-19,12;UBERON:0000042,5.01e-19,12;UBERON:0000310,4.19e-15,10;UBERON:0001443,9.44e-14,11;UBERON:0007195,1.30e-10,1;UBERON:0005284,3.27e-08,5 | |||
|phase1_expression=9.81063248061006,5.35251309727458,6.90676580070259,12.0087958023756,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,2.00832367658802,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,1.30788020649984,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,5.06424511850606,0.561320188866147,1.02511319404561,5.62877973973374,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,2.97726695487734,1.89827654831236,0.762520775695299,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.48482340416319,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,2.52369796457302,0,0.214441591374926,0,0,0,0,0,2.16161013012681,0,0,0,0,0,5.87231580943038,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=9.81063248061006,5.35251309727458,6.90676580070259,12.0087958023756,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,2.00832367658802,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,1.30788020649984,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,5.06424511850606,0.561320188866147,1.02511319404561,5.62877973973374,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,2.97726695487734,1.89827654831236,0.762520775695299,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.48482340416319,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,2.52369796457302,0,0.214441591374926,0,0,0,0,0,2.16161013012681,0,0,0,0,0,5.87231580943038,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@LOC100128054 | |short_description=p4@LOC100128054 | ||
}} | }} |
Latest revision as of 02:12, 20 September 2015
Short description: | p4@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 38bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.88e-28 | 3 |
adipocyte of breast | 8.54e-20 | 2 |
preadipocyte | 7.02e-19 | 12 |
fat cell | 1.88e-15 | 15 |
preadipocyte of the breast | 3.16e-13 | 3 |
smooth muscle cell of the brain vasculature | 4.29e-13 | 3 |
omentum preadipocyte | 5.15e-13 | 3 |
perirenal preadipocyte | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.70e-38 | 6 |
peritoneum | 4.70e-38 | 6 |
abdominal cavity | 4.70e-38 | 6 |
visceral peritoneum | 4.70e-38 | 6 |
cavity lining | 5.01e-19 | 12 |
serous membrane | 5.01e-19 | 12 |
breast | 4.19e-15 | 10 |
chest | 9.44e-14 | 11 |
stroma of bone marrow | 1.30e-10 | 1 |
brain vasculature | 3.27e-08 | 5 |