FFCP PHASE1:Hg19::chr22:36716339..36716364,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7579 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-459bp_to_ENST00000477189_5end | |||
|cluster_id=chr22:36716339..36716364,- | |||
|description=CAGE_peak_3_at_MYH9_5end | |||
|id=chr22:36716339..36716364,- | |||
|ontology_enrichment_celltype=CL:0000144!1.36e-14!625;CL:0002371!5.64e-13!591;CL:0000222!4.07e-12!119;CL:0000548!4.35e-12!679;CL:0000004!4.35e-12!679;CL:0000255!4.35e-12!679;CL:0000012!1.02e-11!682;CL:0000220!1.57e-11!246;CL:0002321!4.59e-11!248;CL:0000213!1.20e-10!57;CL:0000215!1.20e-10!57;CL:0000063!5.37e-09!578;CL:0002078!3.60e-08!44;CL:0000003!9.28e-08!722;CL:0000055!9.87e-08!180;CL:0000115!1.21e-07!35;CL:0000066!9.64e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.68e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.33e-10,121;CL:0002321,3.83e-10,250;CL:0000213,4.74e-10,58;CL:0000215,4.74e-10,58;CL:0002078,3.72e-08,45;CL:0000115,4.31e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.24e-10!79;UBERON:0007798!7.24e-10!79;UBERON:0000055!9.00e-10!69;UBERON:0003102!2.14e-08!95;UBERON:0004535!6.13e-08!110;UBERON:0003914!7.04e-08!118;UBERON:0001981!7.85e-08!60;UBERON:0007500!7.85e-08!60;UBERON:0004537!7.85e-08!60;UBERON:0006965!7.85e-08!60;UBERON:0001009!2.48e-07!113;UBERON:0005256!2.99e-07!143;UBERON:0004872!3.02e-07!84;UBERON:0002100!6.89e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.80e-10,78;UBERON:0007798,2.80e-10,78;UBERON:0000055,1.01e-09,68;UBERON:0003102,5.73e-09,99;UBERON:0007500,6.89e-08,59;UBERON:0001981,6.89e-08,59;UBERON:0004537,6.89e-08,59;UBERON:0006965,6.89e-08,59;UBERON:0004535,2.21e-07,109;UBERON:0001637,3.73e-07,42;UBERON:0003509,3.73e-07,42;UBERON:0004572,3.73e-07,42;UBERON:0003914,8.17e-07,117;UBERON:0001009,9.51e-07,112 | |||
|phase1_expression=2.72517568905835,4.71021152560163,12.1220787522535,5.00366491765652,5.81049422755474,6.97870819280295,5.06599756336621,5.05375898741465,0.261185628199839,1.47440361900905,2.09340350391728,0.436882744260345,2.11013582582763,0.495065411840187,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,2.92759679274304,1.23121058076788,1.22400414746552,1.88072832886853,0.286235987131057,0.958120975510189,0,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0.309632246632152,1.83884244895785,0.90361775633475,0.369754010166788,0.232401601740905,0,0,1.10799081706375,1.40381113229099,0.434021741431704,2.46307021663917,0.971680998056939,2.57575567634187,1.59938062657521,0.755751887377619,0.485168122375632,1.62700325833979,1.23350366406548,0.619412741790207,0.863077176966451,1.5369642391746,0,1.03423704220986,0.645484683583826,1.35426486594342,1.88242339542605,0.545812300115692,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,0,1.19678194572979,0.426224750532694,2.32167390902867,0.56738522469114,1.24564449799115,0.502497330513487,1.5644487552606,0,1.21079900526674,0.736555271975129,0.632924774881769,0.211255286311942,0,0,0.44931452458598,0.450530678524519,0.16072558669708,0,0.59675003159727,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0,1.37696839079683,2.35806457649499,1.23360899399706,1.17030546773475,0.651844533267181,0,0,1.55974639639243,0,0.221533894583621,0.812411591295047,0.640456598628376,0.650296737799391,0.986627427622057,0.276350017785848,1.44901542867526,0.444859689486181,0.267540828089713,0,0.906474741580529,0,0,0.506039384039006,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,2.41928091869679,1.06976078313403,0.868946423296794,0,0,0.511450247374121,3.61439152384566,4.51204119572301,2.60723734129483,1.5905718941022,0.973269740605272,1.70162670895322,1.10864698731282,1.84453049955565,0.0654895377488563,2.5500670180478,1.11235332835329,0.324547393654683,0.174129737299267,1.32957960518865,0,0,0,1.39133685156694,0,2.08284300964557,0.56530794192401,7.55098985177831,5.50236083880135,1.8809546988313,0.516833518338658,1.77883131343355,5.35552980423472,13.2933674646019,1.52054421143703,7.80998584154142,6.25027236587977,4.0507097394088,2.41109266367015,0.22452937262617,0.788280363383256,1.53316637465883,1.89853131913626,1.09921046358244,0,0,2.61656431285521,3.97577561356255,9.11739683984974,2.51577443545116,11.1866282092037,1.41867352879343,0,1.06748995729705,10.3600370335207,2.17847724779836,0.808264032418128,0.490385709340376,2.72443369760877,0.576175924479999,0.70296429550139,4.37024107562449,0,1.04614076386261,0.23486899728753,0.161872944368132,0.421352420106746,0.816616685019573,0.245668634623536,2.06651562351531,8.31602000097437,3.70900393917835,4.55080680969013,2.87447256726495,0.336672227908132,0.250237039743928,0.554128230968366,1.75591048352335,2.14541457059314,1.80285670687916,0.226864366320042,1.61450672119976,5.55249210928275,2.96704661623387,1.20036438433761,3.50378599410692,0.772921620136887,6.51408997160564,0.506328996723799,5.06672426838233,1.51460264546469,3.03764665519588,3.23292113637624,2.4850671476163,3.72782763442269,1.3564847384839,3.28543450377605,3.54569956768085,1.72082757233402,0.243947412259191,0,0.464775771478074,0.207322110030741,1.00928340350251,0,3.12899064659632,3.21620469096443,2.76269842704961,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.871517776369625,0,0,0.196221465125346,0,8.85786545549578,9.81692416624121,2.4694440679884,1.47008711385542,0,0,1.18157981336281,0,1.22988438543114,1.71567810298526,14.3772873885299,3.37205259772859,1.00528972411631,0.833296006426766,0.651616610620649,0,0,0.115930404975077,0.117408694235822,2.45422961193825,2.31492756288305,2.66355813128438,0.790204397959275,0,0.246217006087397,0.702012795417713,0.743155811443641,0.93733833986777,7.0552493843521,3.54437743105966,0.895585227028483,0.871901815541886,0,0,1.76096868026452,2.90259361757081,3.02651902175619,2.5248486685276,0.380987365753014,4.96584953225761,4.68869788840188,0,0.616964956219941,0.300343057843917,0,1.34557301214433,1.30788020649984,0.1466765716419,2.19761916788222,0,0,28.721316591166,6.24044621468197,0.257207374262142,0,0.532844358032199,1.57275793023962,0.542621605391443,0,0.325736184293735,1.42156779497018,0,4.82303003295338,2.61460037580088,9.19751518874925,0,0,0,4.79249710983165,10.3375742250703,0,0.723906533337896,0.821905290201534,1.61154866915906,0.448340575974109,1.97030760201927,0.646882724578552,1.15508732651774,0.508189248444927,0,0,0,0,3.74503511973591,8.97484377612075,3.31532410748828,0.49076596687656,1.00034104211935,0.271265023699736,2.07970861530807,1.60586089917446,1.10391690523754,0.937131319941706,6.3198680942821,9.09630016223939,1.03473071292505,2.65690239414175,0.737476674166813,4.86548241021264,10.9648648179135,4.11772108573027,1.86091223510599,1.07857100409308,1.06727557803444,0.303127571446259,1.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| |||
|short_description=p3@MYH9 | |||
}} |
Latest revision as of 02:11, 20 September 2015
Short description: | p3@MYH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYH9_5end |
Coexpression cluster: | NA |
Association with transcript: | -459bp_to_ENST00000477189_5end |
EntrezGene: | MYH9 |
HGNC: | 7579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.33e-10 | 121 |
embryonic cell | 3.83e-10 | 250 |
lining cell | 4.74e-10 | 58 |
barrier cell | 4.74e-10 | 58 |
meso-epithelial cell | 3.72e-08 | 45 |
endothelial cell | 4.31e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.80e-10 | 78 |
vascular system | 2.80e-10 | 78 |
vessel | 1.01e-09 | 68 |
surface structure | 5.73e-09 | 99 |
epithelial tube open at both ends | 6.89e-08 | 59 |
blood vessel | 6.89e-08 | 59 |
blood vasculature | 6.89e-08 | 59 |
vascular cord | 6.89e-08 | 59 |
cardiovascular system | 2.21e-07 | 109 |
artery | 3.73e-07 | 42 |
arterial blood vessel | 3.73e-07 | 42 |
arterial system | 3.73e-07 | 42 |
epithelial tube | 8.17e-07 | 117 |
circulatory system | 9.51e-07 | 112 |