FFCP PHASE1:Hg19::chr4:100815525..100815622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8649 | |EntrezGene=8649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15606 | |HGNC=15606 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHA4 | |UniProt=Q9UHA4 | ||
|association_with_transcript=0bp_to_ENST00000226522,ENST00000515100_5end | |association_with_transcript=0bp_to_ENST00000226522,ENST00000515100_5end | ||
|cluster_id=chr4:100815525..100815622,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_LAMTOR3_5end | |description=CAGE_peak_1_at_LAMTOR3_5end | ||
|id=chr4:100815525..100815622,- | |id=chr4:100815525..100815622,- | ||
|ontology_enrichment_celltype=CL:0000766!2.72e-26!76;CL:0000839!2.85e-24!70;CL:0002009!9.03e-24!65;CL:0000557!7.48e-23!71;CL:0002194!7.58e-23!63;CL:0000576!7.58e-23!63;CL:0000040!7.58e-23!63;CL:0000559!7.58e-23!63;CL:0002057!3.07e-22!42;CL:0000763!1.17e-21!112;CL:0000049!1.17e-21!112;CL:0000738!5.39e-20!140;CL:0000860!6.77e-19!45;CL:0002031!2.98e-18!124;CL:0002032!5.57e-18!165;CL:0000837!5.57e-18!165;CL:0000037!5.29e-17!172;CL:0000566!5.29e-17!172;CL:0002087!4.70e-15!119;CL:0000988!5.54e-15!182;CL:0000134!2.40e-08!358;CL:0002320!9.81e-08!365 | |ontology_enrichment_celltype=CL:0000766!2.72e-26!76;CL:0000839!2.85e-24!70;CL:0002009!9.03e-24!65;CL:0000557!7.48e-23!71;CL:0002194!7.58e-23!63;CL:0000576!7.58e-23!63;CL:0000040!7.58e-23!63;CL:0000559!7.58e-23!63;CL:0002057!3.07e-22!42;CL:0000763!1.17e-21!112;CL:0000049!1.17e-21!112;CL:0000738!5.39e-20!140;CL:0000860!6.77e-19!45;CL:0002031!2.98e-18!124;CL:0002032!5.57e-18!165;CL:0000837!5.57e-18!165;CL:0000037!5.29e-17!172;CL:0000566!5.29e-17!172;CL:0002087!4.70e-15!119;CL:0000988!5.54e-15!182;CL:0000134!2.40e-08!358;CL:0002320!9.81e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;6.17e-19;39!CL:0000234;6.17e-19;39!CL:0000576;8.57e-16;48!CL:0000766;1.28e-12;69!CL:0000763;2.90e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.55e-30,72;CL:0000839,7.68e-28,66;CL:0002009,1.74e-27,61;CL:0002194,1.53e-26,59;CL:0000576,1.53e-26,59;CL:0000040,1.53e-26,59;CL:0000559,1.53e-26,59;CL:0000557,3.08e-26,67;CL:0000473,2.97e-25,48;CL:0000234,2.97e-25,48;CL:0000763,4.94e-24,108;CL:0000049,4.94e-24,108;CL:0000860,3.07e-22,42;CL:0002057,3.07e-22,42;CL:0000738,6.04e-22,136;CL:0002031,3.10e-20,120;CL:0002032,1.26e-19,161;CL:0000837,1.26e-19,161;CL:0000037,1.49e-18,168;CL:0000988,6.93e-17,177;CL:0002087,7.59e-17,115;CL:0000134,3.26e-09,354;CL:0002320,1.47e-08,361;CL:0000219,2.21e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.41e-16;42!CL:0000049;9.40e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-21!102;UBERON:0003061!1.23e-21!102;UBERON:0002371!3.98e-21!80;UBERON:0001474!6.28e-20!86;UBERON:0004765!1.64e-19!101;UBERON:0001434!1.64e-19!101;UBERON:0002193!2.88e-19!112;UBERON:0002405!2.04e-11!115;UBERON:0002384!3.21e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.23e-21!102;UBERON:0003061!1.23e-21!102;UBERON:0002371!3.98e-21!80;UBERON:0001474!6.28e-20!86;UBERON:0004765!1.64e-19!101;UBERON:0001434!1.64e-19!101;UBERON:0002193!2.88e-19!112;UBERON:0002405!2.04e-11!115;UBERON:0002384!3.21e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.65e-24,98;UBERON:0003061,3.65e-24,98;UBERON:0002371,4.56e-24,76;UBERON:0004765,4.84e-23,90;UBERON:0001474,1.30e-22,82;UBERON:0002193,1.83e-21,108;UBERON:0001434,2.57e-21,100;UBERON:0002405,3.52e-19,93;UBERON:0002384,5.27e-08,371 | |||
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| ||
|short_description=p1@LAMTOR3 | |short_description=p1@LAMTOR3 | ||
}} | }} |
Latest revision as of 02:10, 20 September 2015
Short description: | p1@LAMTOR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMTOR3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000226522, ENST00000515100_5end |
EntrezGene: | LAMTOR3 |
HGNC: | 15606 |
UniProt: | Q9UHA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.55e-30 | 72 |
myeloid lineage restricted progenitor cell | 7.68e-28 | 66 |
macrophage dendritic cell progenitor | 1.74e-27 | 61 |
monopoietic cell | 1.53e-26 | 59 |
monocyte | 1.53e-26 | 59 |
monoblast | 1.53e-26 | 59 |
promonocyte | 1.53e-26 | 59 |
granulocyte monocyte progenitor cell | 3.08e-26 | 67 |
defensive cell | 2.97e-25 | 48 |
phagocyte | 2.97e-25 | 48 |
myeloid cell | 4.94e-24 | 108 |
common myeloid progenitor | 4.94e-24 | 108 |
classical monocyte | 3.07e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-22 | 42 |
leukocyte | 6.04e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 3.10e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.26e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-19 | 161 |
hematopoietic stem cell | 1.49e-18 | 168 |
hematopoietic cell | 6.93e-17 | 177 |
nongranular leukocyte | 7.59e-17 | 115 |
mesenchymal cell | 3.26e-09 | 354 |
connective tissue cell | 1.47e-08 | 361 |
motile cell | 2.21e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.65e-24 | 98 |
blood island | 3.65e-24 | 98 |
bone marrow | 4.56e-24 | 76 |
skeletal element | 4.84e-23 | 90 |
bone element | 1.30e-22 | 82 |
hemolymphoid system | 1.83e-21 | 108 |
skeletal system | 2.57e-21 | 100 |
immune system | 3.52e-19 | 93 |
connective tissue | 5.27e-08 | 371 |