FFCP PHASE1:Hg19::chr12:68553512..68553528,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:68553512..68553528,- to FFCP PHASE1:Hg19::chr12:68553512..68553528,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3458 | |EntrezGene=3458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5438 | |HGNC=5438 | ||
|TSSclassifier=strong | |||
|UniProt=P01579 | |UniProt=P01579 | ||
|association_with_transcript=0bp_to_ENST00000229135,NM_000619,uc001stw.1_5end | |||
|cluster_id=chr12:68553512..68553528,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_1_at_IFNG_5end | |||
|id=chr12:68553512..68553528,- | |||
|ontology_enrichment_celltype=CL:0000738!6.77e-24!140;CL:0000791!8.32e-22!18;CL:0000789!8.32e-22!18;CL:0002420!8.32e-22!18;CL:0002419!8.32e-22!18;CL:0000790!8.32e-22!18;CL:0002087!4.18e-21!119;CL:0000838!2.94e-20!52;CL:0000542!1.17e-19!53;CL:0000051!1.17e-19!53;CL:0000084!1.22e-19!25;CL:0000827!1.22e-19!25;CL:0002031!3.18e-17!124;CL:0000037!2.68e-16!172;CL:0000566!2.68e-16!172;CL:0000625!6.15e-16!11;CL:0000988!6.01e-15!182;CL:0002032!1.38e-14!165;CL:0000837!1.38e-14!165;CL:0000094!1.08e-08!8;CL:0000081!2.54e-07!11;CL:0000766!7.49e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.55e-42;18!CL:0000789;1.55e-42;18!CL:0002419;1.55e-42;18!CL:0000084;5.21e-37;25!CL:0000625;3.37e-30;11!CL:0000094;2.90e-16;8!CL:0000542;6.19e-14;53!CL:0000624;1.15e-11;6!CL:0000081;1.63e-11;11!CL:0000623;4.29e-10;3!CL:0000767;1.35e-09;3!CL:0000226;6.78e-09;3!CL:0000842;6.78e-09;3!CL:0002087;4.02e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.64e-42,18;CL:0000789,1.64e-42,18;CL:0002420,1.64e-42,18;CL:0002419,1.64e-42,18;CL:0000790,1.64e-42,18;CL:0000084,5.52e-37,25;CL:0000827,5.52e-37,25;CL:0000625,3.29e-30,11;CL:0000838,1.28e-27,52;CL:0000542,5.82e-27,53;CL:0000051,5.82e-27,53;CL:0000738,1.52e-23,136;CL:0002087,8.48e-19,115;CL:0000037,5.30e-17,168;CL:0000094,3.08e-16,8;CL:0000988,1.35e-15,177;CL:0002032,7.68e-15,161;CL:0000837,7.68e-15,161;CL:0002031,6.05e-14,120;CL:0000624,1.24e-11,6;CL:0000081,1.70e-11,11;CL:0000623,4.30e-10,3;CL:0000825,4.30e-10,3;CL:0000767,1.39e-09,3;CL:0000226,6.01e-09,3;CL:0000842,6.01e-09,3;CL:0000893,5.01e-07,2;CL:0002489,5.01e-07,2;CL:0000809,5.01e-07,2;CL:0000808,5.01e-07,2;CL:0000894,5.01e-07,2;CL:0000806,5.01e-07,2;CL:0000807,5.01e-07,2;CL:0000805,5.01e-07,2;CL:0002425,5.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-42;18!CL:0000051;6.19e-14;53!CL:0002425;5.08e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-17!115;UBERON:0000178!2.48e-11!15;UBERON:0000179!2.48e-11!15;UBERON:0000463!2.48e-11!15;UBERON:0002390!1.01e-10!102;UBERON:0003061!1.01e-10!102;UBERON:0002193!2.01e-09!112;UBERON:0004177!1.98e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.41e-19;15!UBERON:0000179;3.41e-19;15!UBERON:0000463;3.41e-19;15!UBERON:0002390;1.05e-10;32!UBERON:0002193;7.10e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.83e-19,15;UBERON:0000179,2.83e-19,15;UBERON:0000463,2.83e-19,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.9704141467987,0.944529375764151,15.7345710739562,112.845843040581,16.1008768248719,0,0,0,0,0.142169232487422,0.293600439334847,13.2958898047651,22.661522564126,16.9268479158364,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0.962787081228281,1.27867425159808,0,0.199463657621632,0,0.870627715885752,2.8369261234557,0.622822248995575,0.251248665256743,0,0,0.605399502633369,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,90.8023872030088,0,12.1960057470577,16.1134412727158,8.42966145897988,0.167186495390678,0,0,0,1.89397776704795,2.3568472597987,1.32920336750173,2.97884250141517,0.128091319725675,0.650296737799391,5.91976456573234,5.52700035571697,7.24507714337631,0.296573126324121,0.535081656179426,1.04535523804977,17.7895668035179,51.3515461426574,26.8029407476451,40.4831507231205,13.6983128159362,16.9281698002669,18.0585888445191,13.250610478844,14.8464468939125,14.9916871862815,12.3124171062889,27.0972238983945,88.5053602756575,75.9530156025161,46.3438092424957,0,0,0,0,0,0,0,0,0,0,0.87834785693126,2.03017567021455,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,15.511210565933,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9423893349061,122.553132845599,144.470475155877,133.605100767218,0,0,0,0,0,2.24702107184155,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,12.5114236474798,7.89783927745488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,1.12972560932135,0,0,0,0,7.10426652925037,7.64637207142375,2.27858874869665,2.62054953003568,5.34770955012053,1.94541993357815,4.86028293514303,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0.102268682502155,2.33861130376032,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0.638002319463839,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.258565912723101,0.13223260174269,0,0,7.04796922946785,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,103.593471052854,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.691403925334676,0,0.271878931907327,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0,1.50374268767766,2.38494185502236,0.0999411559249289,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0.258355639344024,0.558672428662721,0,0.190941474834495,0,1.08858373948481,0,1.54909721933551,1.79305513481691,0,0,0,0,0,0,0.488965776731466,0,0,0.402547587182052,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.9704141467987,0.944529375764151,15.7345710739562,112.845843040581,16.1008768248719,0,0,0,0,0.142169232487422,0.293600439334847,13.2958898047651,22.661522564126,16.9268479158364,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0.962787081228281,1.27867425159808,0,0.199463657621632,0,0.870627715885752,2.8369261234557,0.622822248995575,0.251248665256743,0,0,0.605399502633369,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,90.8023872030088,0,12.1960057470577,16.1134412727158,8.42966145897988,0.167186495390678,0,0,0,1.89397776704795,2.3568472597987,1.32920336750173,2.97884250141517,0.128091319725675,0.650296737799391,5.91976456573234,5.52700035571697,7.24507714337631,0.296573126324121,0.535081656179426,1.04535523804977,17.7895668035179,51.3515461426574,26.8029407476451,40.4831507231205,13.6983128159362,16.9281698002669,18.0585888445191,13.250610478844,14.8464468939125,14.9916871862815,12.3124171062889,27.0972238983945,88.5053602756575,75.9530156025161,46.3438092424957,0,0,0,0,0,0,0,0,0,0,0.87834785693126,2.03017567021455,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,15.511210565933,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9423893349061,122.553132845599,144.470475155877,133.605100767218,0,0,0,0,0,2.24702107184155,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,12.5114236474798,7.89783927745488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,1.12972560932135,0,0,0,0,7.10426652925037,7.64637207142375,2.27858874869665,2.62054953003568,5.34770955012053,1.94541993357815,4.86028293514303,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0.102268682502155,2.33861130376032,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0.638002319463839,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.258565912723101,0.13223260174269,0,0,7.04796922946785,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,103.593471052854,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.691403925334676,0,0.271878931907327,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0,1.50374268767766,2.38494185502236,0.0999411559249289,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0.258355639344024,0.558672428662721,0,0.190941474834495,0,1.08858373948481,0,1.54909721933551,1.79305513481691,0,0,0,0,0,0,0.488965776731466,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p1@IFNG | |||
}} | }} |
Latest revision as of 02:10, 20 September 2015
Short description: | p1@IFNG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFNG_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000229135, NM_000619, uc001stw.1_5end |
EntrezGene: | IFNG |
HGNC: | 5438 |
UniProt: | P01579 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.83e-19 | 15 |
haemolymphatic fluid | 2.83e-19 | 15 |
organism substance | 2.83e-19 | 15 |