FFCP PHASE1:Hg19::chr9:112082679..112082743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54566 | |EntrezGene=54566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19818 | |HGNC=19818 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE35,Q9H329,Q9NX84,Q59GC2,Q9NSG9 | |UniProt=E9PE35,Q9H329,Q9NX84,Q59GC2,Q9NSG9 | ||
|association_with_transcript=277bp_to_ENST00000262536,NM_018424,NM_019114,uc004bdz.1,uc004bea.2_5end | |association_with_transcript=277bp_to_ENST00000262536,NM_018424,NM_019114,uc004bdz.1,uc004bea.2_5end | ||
|cluster_id=chr9:112082679..112082743,- | |||
|description=CAGE_peak_1_at_EPB41L4B_5end | |description=CAGE_peak_1_at_EPB41L4B_5end | ||
|id=chr9:112082679..112082743,- | |id=chr9:112082679..112082743,- | ||
|ontology_enrichment_celltype=CL:0000223!3.90e-13!59;CL:0000066!1.04e-12!254;CL:0002076!1.88e-10!43 | |ontology_enrichment_celltype=CL:0000223!3.90e-13!59;CL:0000066!1.04e-12!254;CL:0002076!1.88e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.67e-08;42!CL:0002368;5.26e-07;13 | |ontology_enrichment_celltype_v019=CL:0002076;3.67e-08;42!CL:0002368;5.26e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.55e-13,58;CL:0002076,5.37e-11,42;CL:0000066,3.41e-08,253;CL:0002368,5.02e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;2.59e-08;58 | |ontology_enrichment_development_v019=CL:0000223;2.59e-08;58 | ||
|ontology_enrichment_disease=DOID:305!1.28e-08!106 | |ontology_enrichment_disease=DOID:305!1.28e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.06e-19!115;UBERON:0000481!1.04e-17!347;UBERON:0004119!1.99e-16!169;UBERON:0000925!1.99e-16!169;UBERON:0006595!1.99e-16!169;UBERON:0000475!1.16e-15!365;UBERON:0000062!2.95e-15!511;UBERON:0001007!3.77e-14!155;UBERON:0001555!3.77e-14!155;UBERON:0007026!3.77e-14!155;UBERON:0000466!5.44e-14!126;UBERON:0005177!1.04e-13!107;UBERON:0000468!4.43e-13!659;UBERON:0000922!2.99e-12!612;UBERON:0004921!8.27e-12!129;UBERON:0004185!8.27e-12!129;UBERON:0000464!1.08e-11!104;UBERON:0000119!1.20e-11!312;UBERON:0000467!1.51e-11!625;UBERON:0000064!2.08e-11!219;UBERON:0000480!2.40e-11!626;UBERON:0000483!4.46e-11!309;UBERON:0000923!2.72e-10!604;UBERON:0005291!2.72e-10!604;UBERON:0006598!2.72e-10!604;UBERON:0002532!2.72e-10!604;UBERON:0002050!4.20e-10!605;UBERON:0005423!4.20e-10!605;UBERON:0000077!4.54e-10!130;UBERON:0000477!3.83e-09!286;UBERON:0001048!5.59e-09!168;UBERON:0005911!9.57e-09!82;UBERON:0001041!1.08e-08!98;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0000033!2.09e-08!123;UBERON:0004121!2.11e-08!169;UBERON:0009569!2.51e-08!113;UBERON:0000153!2.57e-08!129;UBERON:0007811!2.57e-08!129;UBERON:0004111!2.59e-08!241;UBERON:0005743!2.73e-08!86;UBERON:0005181!1.04e-07!35;UBERON:0000924!1.81e-07!173;UBERON:0006601!1.81e-07!173;UBERON:0001017!1.88e-07!82;UBERON:0005178!1.89e-07!34;UBERON:0002224!1.89e-07!34;UBERON:0001049!2.46e-07!57;UBERON:0005068!2.46e-07!57;UBERON:0006241!2.46e-07!57;UBERON:0007135!2.46e-07!57;UBERON:0002346!3.67e-07!90;UBERON:0000025!4.62e-07!194;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238 | |ontology_enrichment_uberon=UBERON:0007023!8.06e-19!115;UBERON:0000481!1.04e-17!347;UBERON:0004119!1.99e-16!169;UBERON:0000925!1.99e-16!169;UBERON:0006595!1.99e-16!169;UBERON:0000475!1.16e-15!365;UBERON:0000062!2.95e-15!511;UBERON:0001007!3.77e-14!155;UBERON:0001555!3.77e-14!155;UBERON:0007026!3.77e-14!155;UBERON:0000466!5.44e-14!126;UBERON:0005177!1.04e-13!107;UBERON:0000468!4.43e-13!659;UBERON:0000922!2.99e-12!612;UBERON:0004921!8.27e-12!129;UBERON:0004185!8.27e-12!129;UBERON:0000464!1.08e-11!104;UBERON:0000119!1.20e-11!312;UBERON:0000467!1.51e-11!625;UBERON:0000064!2.08e-11!219;UBERON:0000480!2.40e-11!626;UBERON:0000483!4.46e-11!309;UBERON:0000923!2.72e-10!604;UBERON:0005291!2.72e-10!604;UBERON:0006598!2.72e-10!604;UBERON:0002532!2.72e-10!604;UBERON:0002050!4.20e-10!605;UBERON:0005423!4.20e-10!605;UBERON:0000077!4.54e-10!130;UBERON:0000477!3.83e-09!286;UBERON:0001048!5.59e-09!168;UBERON:0005911!9.57e-09!82;UBERON:0001041!1.08e-08!98;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0000033!2.09e-08!123;UBERON:0004121!2.11e-08!169;UBERON:0009569!2.51e-08!113;UBERON:0000153!2.57e-08!129;UBERON:0007811!2.57e-08!129;UBERON:0004111!2.59e-08!241;UBERON:0005743!2.73e-08!86;UBERON:0005181!1.04e-07!35;UBERON:0000924!1.81e-07!173;UBERON:0006601!1.81e-07!173;UBERON:0001017!1.88e-07!82;UBERON:0005178!1.89e-07!34;UBERON:0002224!1.89e-07!34;UBERON:0001049!2.46e-07!57;UBERON:0005068!2.46e-07!57;UBERON:0006241!2.46e-07!57;UBERON:0007135!2.46e-07!57;UBERON:0002346!3.67e-07!90;UBERON:0000025!4.62e-07!194;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.44e-07;20!UBERON:0002619;6.47e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.44e-07;20!UBERON:0002619;6.47e-07;22 | ||
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| ||
|short_description=p1@EPB41L4B | |short_description=p1@EPB41L4B | ||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p1@EPB41L4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPB41L4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 277bp_to_ENST00000262536, NM_018424, NM_019114, uc004bdz.1, uc004bea.2_5end |
EntrezGene: | EPB41L4B |
HGNC: | 19818 |
UniProt: | E9PE35Q9H329Q9NX84Q59GC2Q9NSG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.55e-13 | 58 |
endo-epithelial cell | 5.37e-11 | 42 |
epithelial cell | 3.41e-08 | 253 |
respiratory epithelial cell | 5.02e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.34e-18 | 114 |
organ system subdivision | 4.36e-13 | 223 |
endoderm-derived structure | 5.94e-11 | 160 |
endoderm | 5.94e-11 | 160 |
presumptive endoderm | 5.94e-11 | 160 |
digestive system | 3.00e-09 | 145 |
digestive tract | 3.00e-09 | 145 |
primitive gut | 3.00e-09 | 145 |
trunk region element | 1.19e-08 | 101 |
endo-epithelium | 3.10e-08 | 82 |
subdivision of digestive tract | 4.05e-08 | 118 |
neocortex | 1.89e-07 | 20 |
embryo | 3.31e-07 | 592 |
cell layer | 3.39e-07 | 309 |
regional part of cerebral cortex | 4.62e-07 | 22 |