FFCP PHASE1:Hg19::chr11:72525425..72525486,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:72525425..72525486,+
|short_description=p1@ATG16L2
|description=CAGE_peak_1_at_ATG16L2_5end
|association_with_transcript=0bp_to_ENST00000435507,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89849 | |EntrezGene=89849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25464 | |HGNC=25464 | ||
|UniProt=F5GWM4, | |TSSclassifier=strong | ||
|UniProt=F5GWM4,F5GWZ9,F5H7B6,Q8NAA4,Q9H7Q5,Q2VPK0 | |||
|association_with_transcript=0bp_to_ENST00000435507,ENST00000439504,ENST00000534905,ENST00000537143,ENST00000540567,ENST00000542908,ENST00000544490,NM_033388,uc001otc.1,uc001otd.2,uc001ote.2,uc009ytj.1,uc010rrf.1_5end | |||
|cluster_id=chr11:72525425..72525486,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ATG16L2_5end | |||
|id=chr11:72525425..72525486,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.90e-55!172;CL:0000566!5.90e-55!172;CL:0000738!4.55e-53!140;CL:0002032!1.92e-51!165;CL:0000837!1.92e-51!165;CL:0000988!6.02e-51!182;CL:0002087!8.03e-43!119;CL:0002031!3.28e-42!124;CL:0000763!1.89e-32!112;CL:0000049!1.89e-32!112;CL:0000766!1.69e-31!76;CL:0000557!1.59e-27!71;CL:0000839!1.64e-24!70;CL:0002009!2.21e-24!65;CL:0002194!9.07e-24!63;CL:0000576!9.07e-24!63;CL:0000040!9.07e-24!63;CL:0000559!9.07e-24!63;CL:0002057!3.99e-21!42;CL:0000860!8.77e-20!45;CL:0000542!1.77e-16!53;CL:0000051!1.77e-16!53;CL:0000838!4.02e-16!52;CL:0000084!1.17e-08!25;CL:0000827!1.17e-08!25;CL:0000791!5.55e-08!18;CL:0000789!5.55e-08!18;CL:0002420!5.55e-08!18;CL:0002419!5.55e-08!18;CL:0000790!5.55e-08!18;CL:0000134!1.37e-07!358;CL:0000945!2.34e-07!24;CL:0000826!2.34e-07!24;CL:0002393!4.11e-07!9;CL:0002397!4.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.47e-15;48!CL:0000766;1.34e-14;69!CL:0000860;1.93e-14;33!CL:0002057;1.93e-14;33!CL:0000473;1.77e-13;39!CL:0000234;1.77e-13;39!CL:0002087;7.95e-13;104!CL:0000738;8.25e-12;136!CL:0000763;5.40e-11;100!CL:0000542;4.10e-10;53!CL:0000988;2.72e-09;177!CL:0000084;6.46e-09;25!CL:0000791;4.21e-08;18!CL:0000789;4.21e-08;18!CL:0002419;4.21e-08;18!CL:0000945;1.48e-07;24!CL:0000094;9.24e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.10e-56,168;CL:0000738,2.06e-54,136;CL:0002032,1.71e-52,161;CL:0000837,1.71e-52,161;CL:0000988,2.71e-52,177;CL:0002087,3.93e-44,115;CL:0002031,1.93e-43,120;CL:0000763,1.71e-33,108;CL:0000049,1.71e-33,108;CL:0000766,4.44e-33,72;CL:0000557,5.23e-29,67;CL:0000839,7.60e-26,66;CL:0002009,8.06e-26,61;CL:0002194,3.22e-25,59;CL:0000576,3.22e-25,59;CL:0000040,3.22e-25,59;CL:0000559,3.22e-25,59;CL:0000473,1.97e-22,48;CL:0000234,1.97e-22,48;CL:0000860,3.83e-21,42;CL:0002057,3.83e-21,42;CL:0000542,1.71e-16,53;CL:0000051,1.71e-16,53;CL:0000838,3.90e-16,52;CL:0000084,1.15e-08,25;CL:0000827,1.15e-08,25;CL:0000791,5.48e-08,18;CL:0000789,5.48e-08,18;CL:0002420,5.48e-08,18;CL:0002419,5.48e-08,18;CL:0000790,5.48e-08,18;CL:0000134,8.84e-08,354;CL:0000945,2.31e-07,24;CL:0000826,2.31e-07,24;CL:0002393,4.06e-07,9;CL:0002397,4.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-15;42!CL:0000051;4.10e-10;53!CL:0000049;7.02e-10;108!CL:0000790;4.21e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.07e-32!102;UBERON:0003061!3.07e-32!102;UBERON:0002193!1.54e-30!112;UBERON:0002371!5.30e-23!80;UBERON:0001474!6.10e-20!86;UBERON:0002405!3.34e-18!115;UBERON:0004765!1.65e-13!101;UBERON:0001434!1.65e-13!101;UBERON:0007023!3.05e-09!115;UBERON:0000178!3.39e-08!15;UBERON:0000179!3.39e-08!15;UBERON:0000463!3.39e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.26e-08;15!UBERON:0000179;2.26e-08;15!UBERON:0000463;2.26e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.62e-33,98;UBERON:0003061,2.62e-33,98;UBERON:0002193,1.92e-31,108;UBERON:0002405,2.31e-24,93;UBERON:0002371,5.48e-24,76;UBERON:0001474,1.11e-20,82;UBERON:0004765,9.72e-15,90;UBERON:0001434,4.88e-12,100;UBERON:0007023,3.23e-09,114;UBERON:0000178,3.35e-08,15;UBERON:0000179,3.35e-08,15;UBERON:0000463,3.35e-08,15 | |||
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| ||
|short_description=p1@ATG16L2 | |||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p1@ATG16L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATG16L2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000435507, ENST00000439504, ENST00000534905, ENST00000537143, ENST00000540567, ENST00000542908, ENST00000544490, NM_033388, uc001otc.1, uc001otd.2, uc001ote.2, uc009ytj.1, uc010rrf.1_5end |
EntrezGene: | ATG16L2 |
HGNC: | 25464 |
UniProt: | F5GWM4F5GWZ9F5H7B6Q8NAA4Q9H7Q5Q2VPK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.62e-33 | 98 |
blood island | 2.62e-33 | 98 |
hemolymphoid system | 1.92e-31 | 108 |
immune system | 2.31e-24 | 93 |
bone marrow | 5.48e-24 | 76 |
bone element | 1.11e-20 | 82 |
skeletal element | 9.72e-15 | 90 |
skeletal system | 4.88e-12 | 100 |
adult organism | 3.23e-09 | 114 |
blood | 3.35e-08 | 15 |
haemolymphatic fluid | 3.35e-08 | 15 |
organism substance | 3.35e-08 | 15 |