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FFCP PHASE1:Hg19::chr18:59000817..59000828,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=28316
|EntrezGene=28316
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|UniProt=Q9HBT6
|UniProt=Q9HBT6
|association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end
|association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end
|cluster_id=chr18:59000817..59000828,+
|coexpression_cluster_id=C4
|coexpression_cluster_id=C4
|description=CAGE_peak_3_at_CDH20_5end
|description=CAGE_peak_3_at_CDH20_5end

Latest revision as of 02:02, 20 September 2015

Short description:p3@CDH20
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_CDH20_5end
Coexpression cluster:C4_optic_corpus_substantia_medulla_spinal_thalamus_globus
Association with transcript: -159bp_to_ENST00000536675, uc002lif.2_5end
EntrezGene:CDH20
HGNC: 1760
UniProt: Q9HBT6
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data