FFCP PHASE1:Hg19::chr18:59000817..59000828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=28316 | |EntrezGene=28316 | ||
Line 8: | Line 8: | ||
|UniProt=Q9HBT6 | |UniProt=Q9HBT6 | ||
|association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end | |association_with_transcript=-159bp_to_ENST00000536675,uc002lif.2_5end | ||
|cluster_id=chr18:59000817..59000828,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_CDH20_5end | |description=CAGE_peak_3_at_CDH20_5end |
Latest revision as of 02:02, 20 September 2015
Short description: | p3@CDH20 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -159bp_to_ENST00000536675, uc002lif.2_5end |
EntrezGene: | CDH20 |
HGNC: | 1760 |
UniProt: | Q9HBT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@CDH20 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 1.05e-108 | 56 |
neural rod | 1.05e-108 | 56 |
future spinal cord | 1.05e-108 | 56 |
neural keel | 1.05e-108 | 56 |
regional part of nervous system | 4.49e-96 | 53 |
regional part of brain | 4.49e-96 | 53 |
central nervous system | 1.11e-85 | 81 |
brain | 4.25e-82 | 68 |
future brain | 4.25e-82 | 68 |
nervous system | 6.50e-81 | 89 |
Showing 1 to 10 of 93 entries