FFCP PHASE1:Hg19::chr1:9970227..9970356,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=56998 | |EntrezGene=56998 | ||
| Line 8: | Line 8: | ||
|UniProt=Q9NSA3,Q5T4V2 | |UniProt=Q9NSA3,Q5T4V2 | ||
|association_with_transcript=0bp_to_ENST00000377263,NM_001012329,NM_020248,uc001aqk.1,uc001aql.1_5end | |association_with_transcript=0bp_to_ENST00000377263,NM_001012329,NM_020248,uc001aqk.1,uc001aql.1_5end | ||
|cluster_id=chr1:9970227..9970356,- | |||
|description=CAGE_peak_1_at_CTNNBIP1_5end | |description=CAGE_peak_1_at_CTNNBIP1_5end | ||
|id=chr1:9970227..9970356,- | |id=chr1:9970227..9970356,- | ||
Latest revision as of 01:58, 20 September 2015
| Short description: | p1@CTNNBIP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CTNNBIP1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000377263, NM_001012329, NM_020248, uc001aqk.1, uc001aql.1_5end |
| EntrezGene: | CTNNBIP1 |
| HGNC: | 16913 |
| UniProt: | Q9NSA3Q5T4V2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CTNNBIP1 |
|---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 9.11e-15 | 250 |
| endothelial cell | 5.67e-12 | 36 |
| epithelial cell | 1.31e-10 | 253 |
| meso-epithelial cell | 1.35e-10 | 45 |
| endothelial cell of vascular tree | 4.87e-08 | 24 |
| blood vessel endothelial cell | 2.73e-07 | 18 |
| embryonic blood vessel endothelial progenitor cell | 2.73e-07 | 18 |
| respiratory epithelial cell | 9.37e-07 | 13 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| embryo | 1.23e-19 | 592 |
| developing anatomical structure | 3.09e-19 | 581 |
| cell layer | 4.07e-19 | 309 |
| epithelium | 6.13e-19 | 306 |
| anatomical conduit | 1.60e-18 | 240 |
| embryonic structure | 3.58e-17 | 564 |
| germ layer | 1.27e-15 | 560 |
| germ layer / neural crest | 1.27e-15 | 560 |
| embryonic tissue | 1.27e-15 | 560 |
| presumptive structure | 1.27e-15 | 560 |
Showing 1 to 10 of 36 entries
