FFCP PHASE1:Hg19::chr6:87865262..87865311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23036 | |EntrezGene=23036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18410 | |HGNC=18410 | ||
|TSSclassifier=strong | |||
|UniProt=O60281,E5RFE6,Q3LIB3,Q6P495,Q6ZS01,Q6ZW83 | |UniProt=O60281,E5RFE6,Q3LIB3,Q6P495,Q6ZS01,Q6ZW83 | ||
|association_with_transcript=0bp_to_ENST00000339907,ENST00000369577,ENST00000369578,ENST00000518845,NM_015021,uc003pll.1,uc003plm.3_5end | |association_with_transcript=0bp_to_ENST00000339907,ENST00000369577,ENST00000369578,ENST00000518845,NM_015021,uc003pll.1,uc003plm.3_5end | ||
|cluster_id=chr6:87865262..87865311,+ | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_1_at_ZNF292_5end | |description=CAGE_peak_1_at_ZNF292_5end | ||
|id=chr6:87865262..87865311,+ | |id=chr6:87865262..87865311,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.17e-20!172;CL:0000566!3.17e-20!172;CL:0000738!8.63e-20!140;CL:0002032!1.61e-17!165;CL:0000837!1.61e-17!165;CL:0000988!3.79e-17!182;CL:0000838!1.28e-16!52;CL:0000542!3.38e-16!53;CL:0000051!3.38e-16!53;CL:0002031!5.01e-13!124;CL:0002087!1.62e-12!119;CL:0000791!5.76e-10!18;CL:0000789!5.76e-10!18;CL:0002420!5.76e-10!18;CL:0002419!5.76e-10!18;CL:0000790!5.76e-10!18;CL:0000084!7.98e-09!25;CL:0000827!7.98e-09!25;CL:0000945!1.47e-07!24;CL:0000826!1.47e-07!24;CL:0000236!9.56e-07!14 | |ontology_enrichment_celltype=CL:0000037!3.17e-20!172;CL:0000566!3.17e-20!172;CL:0000738!8.63e-20!140;CL:0002032!1.61e-17!165;CL:0000837!1.61e-17!165;CL:0000988!3.79e-17!182;CL:0000838!1.28e-16!52;CL:0000542!3.38e-16!53;CL:0000051!3.38e-16!53;CL:0002031!5.01e-13!124;CL:0002087!1.62e-12!119;CL:0000791!5.76e-10!18;CL:0000789!5.76e-10!18;CL:0002420!5.76e-10!18;CL:0002419!5.76e-10!18;CL:0000790!5.76e-10!18;CL:0000084!7.98e-09!25;CL:0000827!7.98e-09!25;CL:0000945!1.47e-07!24;CL:0000826!1.47e-07!24;CL:0000236!9.56e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.71e-10;18!CL:0000789;5.71e-10;18!CL:0002419;5.71e-10;18!CL:0000542;9.81e-10;53!CL:0000084;7.62e-09;25!CL:0000945;1.34e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.78e-21,168;CL:0000738,7.44e-21,136;CL:0000988,1.64e-18,177;CL:0002032,2.24e-18,161;CL:0000837,2.24e-18,161;CL:0000838,1.28e-16,52;CL:0000542,3.38e-16,53;CL:0000051,3.38e-16,53;CL:0002031,7.08e-14,120;CL:0002087,2.29e-13,115;CL:0000791,5.76e-10,18;CL:0000789,5.76e-10,18;CL:0002420,5.76e-10,18;CL:0002419,5.76e-10,18;CL:0000790,5.76e-10,18;CL:0000084,7.98e-09,25;CL:0000827,7.98e-09,25;CL:0000945,1.47e-07,24;CL:0000826,1.47e-07,24;CL:0000236,9.56e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;5.71e-10;18!CL:0000051;9.81e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-20!115;UBERON:0001049!1.35e-11!57;UBERON:0005068!1.35e-11!57;UBERON:0006241!1.35e-11!57;UBERON:0007135!1.35e-11!57;UBERON:0001017!6.65e-11!82;UBERON:0000073!1.03e-10!94;UBERON:0001016!1.03e-10!94;UBERON:0003080!6.52e-10!42;UBERON:0002780!7.01e-10!41;UBERON:0001890!7.01e-10!41;UBERON:0006240!7.01e-10!41;UBERON:0005743!7.04e-10!86;UBERON:0002616!1.78e-09!59;UBERON:0000955!3.10e-09!69;UBERON:0006238!3.10e-09!69;UBERON:0002020!1.01e-07!34;UBERON:0003528!1.01e-07!34;UBERON:0001893!1.43e-07!34;UBERON:0002791!1.92e-07!33;UBERON:0001869!5.91e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!4.08e-20!115;UBERON:0001049!1.35e-11!57;UBERON:0005068!1.35e-11!57;UBERON:0006241!1.35e-11!57;UBERON:0007135!1.35e-11!57;UBERON:0001017!6.65e-11!82;UBERON:0000073!1.03e-10!94;UBERON:0001016!1.03e-10!94;UBERON:0003080!6.52e-10!42;UBERON:0002780!7.01e-10!41;UBERON:0001890!7.01e-10!41;UBERON:0006240!7.01e-10!41;UBERON:0005743!7.04e-10!86;UBERON:0002616!1.78e-09!59;UBERON:0000955!3.10e-09!69;UBERON:0006238!3.10e-09!69;UBERON:0002020!1.01e-07!34;UBERON:0003528!1.01e-07!34;UBERON:0001893!1.43e-07!34;UBERON:0002791!1.92e-07!33;UBERON:0001869!5.91e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.39e-07;41!UBERON:0001890;1.39e-07;41!UBERON:0000073;4.79e-07;53!UBERON:0002616;4.79e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.68e-20,114;UBERON:0001016,1.17e-11,89;UBERON:0001049,1.49e-11,56;UBERON:0005068,1.49e-11,56;UBERON:0006241,1.49e-11,56;UBERON:0007135,1.49e-11,56;UBERON:0001017,7.78e-11,81;UBERON:0000073,1.26e-10,53;UBERON:0002616,1.26e-10,53;UBERON:0002780,7.01e-10,41;UBERON:0001890,7.01e-10,41;UBERON:0003080,7.01e-10,41;UBERON:0006240,7.01e-10,41;UBERON:0000955,3.61e-09,68;UBERON:0006238,3.61e-09,68;UBERON:0003528,1.01e-07,34;UBERON:0002020,1.01e-07,34;UBERON:0001893,1.43e-07,34;UBERON:0002791,3.06e-07,32;UBERON:0001869,5.91e-07,32 | |||
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192259689231 | ||
|short_description=p1@ZNF292 | |short_description=p1@ZNF292 | ||
}} | }} |
Latest revision as of 01:53, 20 September 2015
Short description: | p1@ZNF292 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF292_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000339907, ENST00000369577, ENST00000369578, ENST00000518845, NM_015021, uc003pll.1, uc003plm.3_5end |
EntrezGene: | ZNF292 |
HGNC: | 18410 |
UniProt: | O60281E5RFE6Q3LIB3Q6P495Q6ZS01Q6ZW83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.78e-21 | 168 |
leukocyte | 7.44e-21 | 136 |
hematopoietic cell | 1.64e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.24e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-18 | 161 |
lymphoid lineage restricted progenitor cell | 1.28e-16 | 52 |
lymphocyte | 3.38e-16 | 53 |
common lymphoid progenitor | 3.38e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 7.08e-14 | 120 |
nongranular leukocyte | 2.29e-13 | 115 |
mature alpha-beta T cell | 5.76e-10 | 18 |
alpha-beta T cell | 5.76e-10 | 18 |
immature T cell | 5.76e-10 | 18 |
mature T cell | 5.76e-10 | 18 |
immature alpha-beta T cell | 5.76e-10 | 18 |
T cell | 7.98e-09 | 25 |
pro-T cell | 7.98e-09 | 25 |
lymphocyte of B lineage | 1.47e-07 | 24 |
pro-B cell | 1.47e-07 | 24 |
B cell | 9.56e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.68e-20 | 114 |
nervous system | 1.17e-11 | 89 |
neural tube | 1.49e-11 | 56 |
neural rod | 1.49e-11 | 56 |
future spinal cord | 1.49e-11 | 56 |
neural keel | 1.49e-11 | 56 |
central nervous system | 7.78e-11 | 81 |
regional part of nervous system | 1.26e-10 | 53 |
regional part of brain | 1.26e-10 | 53 |
regional part of forebrain | 7.01e-10 | 41 |
forebrain | 7.01e-10 | 41 |
anterior neural tube | 7.01e-10 | 41 |
future forebrain | 7.01e-10 | 41 |
brain | 3.61e-09 | 68 |
future brain | 3.61e-09 | 68 |
brain grey matter | 1.01e-07 | 34 |
gray matter | 1.01e-07 | 34 |
telencephalon | 1.43e-07 | 34 |
regional part of telencephalon | 3.06e-07 | 32 |
cerebral hemisphere | 5.91e-07 | 32 |