FFCP PHASE1:Hg19::chrX:153305763..153305772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4204 | |EntrezGene=4204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6990 | |HGNC=6990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-209bp_to_ENST00000481807_5end | |association_with_transcript=-209bp_to_ENST00000481807_5end | ||
|cluster_id=chrX:153305763..153305772,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_MECP2_5end | |description=CAGE_peak_8_at_MECP2_5end | ||
|id=chrX:153305763..153305772,- | |id=chrX:153305763..153305772,- | ||
|ontology_enrichment_celltype=CL:0002057!8.84e-73!42;CL:0000860!2.76e-67!45;CL:0000766!1.45e-59!76;CL:0000839!1.05e-55!70;CL:0000557!8.87e-55!71;CL:0002194!2.36e-50!63;CL:0000576!2.36e-50!63;CL:0000040!2.36e-50!63;CL:0000559!2.36e-50!63;CL:0002009!1.59e-48!65;CL:0000738!3.49e-41!140;CL:0000763!6.87e-39!112;CL:0000049!6.87e-39!112;CL:0002087!8.45e-36!119;CL:0002031!1.32e-35!124;CL:0000037!1.06e-32!172;CL:0000566!1.06e-32!172;CL:0000988!9.85e-32!182;CL:0002032!7.93e-30!165;CL:0000837!7.93e-30!165;CL:0000134!1.09e-17!358;CL:0002320!4.48e-17!365;CL:0000048!3.67e-16!430;CL:0000034!4.57e-16!444;CL:0000723!9.80e-16!436;CL:0000219!6.47e-15!390;CL:0000767!1.31e-09!3;CL:0000842!4.17e-09!3;CL:0002274!6.69e-09!5;CL:0000457!6.69e-09!5;CL:0002191!6.69e-09!5;CL:0000097!6.69e-09!5;CL:0000831!6.69e-09!5;CL:0002028!6.69e-09!5;CL:0002371!3.24e-08!591;CL:0000080!9.22e-08!6;CL:0000144!1.45e-07!625;CL:0000224!6.33e-07!4 | |ontology_enrichment_celltype=CL:0002057!8.84e-73!42;CL:0000860!2.76e-67!45;CL:0000766!1.45e-59!76;CL:0000839!1.05e-55!70;CL:0000557!8.87e-55!71;CL:0002194!2.36e-50!63;CL:0000576!2.36e-50!63;CL:0000040!2.36e-50!63;CL:0000559!2.36e-50!63;CL:0002009!1.59e-48!65;CL:0000738!3.49e-41!140;CL:0000763!6.87e-39!112;CL:0000049!6.87e-39!112;CL:0002087!8.45e-36!119;CL:0002031!1.32e-35!124;CL:0000037!1.06e-32!172;CL:0000566!1.06e-32!172;CL:0000988!9.85e-32!182;CL:0002032!7.93e-30!165;CL:0000837!7.93e-30!165;CL:0000134!1.09e-17!358;CL:0002320!4.48e-17!365;CL:0000048!3.67e-16!430;CL:0000034!4.57e-16!444;CL:0000723!9.80e-16!436;CL:0000219!6.47e-15!390;CL:0000767!1.31e-09!3;CL:0000842!4.17e-09!3;CL:0002274!6.69e-09!5;CL:0000457!6.69e-09!5;CL:0002191!6.69e-09!5;CL:0000097!6.69e-09!5;CL:0000831!6.69e-09!5;CL:0002028!6.69e-09!5;CL:0002371!3.24e-08!591;CL:0000080!9.22e-08!6;CL:0000144!1.45e-07!625;CL:0000224!6.33e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-118;33!CL:0002057;2.66e-118;33!CL:0000473;5.01e-79;39!CL:0000234;5.01e-79;39!CL:0000576;9.37e-65;48!CL:0000766;4.92e-43;69!CL:0000763;5.56e-18;100!CL:0002087;3.09e-17;104!CL:0000767;1.19e-16;3!CL:0000738;2.25e-11;136!CL:0002393;1.93e-09;6!CL:0002397;1.93e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.96e-123,42;CL:0002057,2.96e-123,42;CL:0000473,3.91e-107,48;CL:0000234,3.91e-107,48;CL:0002194,1.48e-84,59;CL:0000576,1.48e-84,59;CL:0000040,1.48e-84,59;CL:0000559,1.48e-84,59;CL:0000766,6.63e-83,72;CL:0002009,1.22e-81,61;CL:0000839,4.08e-75,66;CL:0000557,6.32e-74,67;CL:0000763,1.51e-53,108;CL:0000049,1.51e-53,108;CL:0000738,4.54e-44,136;CL:0002087,8.63e-44,115;CL:0002031,5.77e-39,120;CL:0000037,1.46e-34,168;CL:0002032,4.94e-34,161;CL:0000837,4.94e-34,161;CL:0000988,1.68e-32,177;CL:0000767,1.26e-16,3;CL:0000134,3.93e-13,354;CL:0002320,9.41e-13,361;CL:0000219,2.05e-11,386;CL:0000034,3.77e-10,441;CL:0000048,8.94e-10,427;CL:0000723,1.51e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.68e-90;42!CL:0000049;1.53e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-47!80;UBERON:0002390!1.07e-43!102;UBERON:0003061!1.07e-43!102;UBERON:0001474!1.84e-43!86;UBERON:0002193!8.36e-39!112;UBERON:0004765!1.75e-35!101;UBERON:0001434!1.75e-35!101;UBERON:0002405!2.25e-33!115;UBERON:0003081!1.92e-24!216;UBERON:0002204!2.32e-23!167;UBERON:0002384!3.07e-16!375;UBERON:0000926!6.04e-08!448;UBERON:0004120!6.04e-08!448;UBERON:0006603!6.04e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!1.75e-47!80;UBERON:0002390!1.07e-43!102;UBERON:0003061!1.07e-43!102;UBERON:0001474!1.84e-43!86;UBERON:0002193!8.36e-39!112;UBERON:0004765!1.75e-35!101;UBERON:0001434!1.75e-35!101;UBERON:0002405!2.25e-33!115;UBERON:0003081!1.92e-24!216;UBERON:0002204!2.32e-23!167;UBERON:0002384!3.07e-16!375;UBERON:0000926!6.04e-08!448;UBERON:0004120!6.04e-08!448;UBERON:0006603!6.04e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-64,76;UBERON:0001474,1.64e-59,82;UBERON:0004765,9.20e-54,90;UBERON:0002390,2.46e-52,98;UBERON:0003061,2.46e-52,98;UBERON:0002405,7.37e-52,93;UBERON:0001434,7.42e-48,100;UBERON:0002193,5.48e-47,108;UBERON:0002204,2.19e-26,167;UBERON:0003081,2.81e-22,203;UBERON:0002384,3.10e-12,371;UBERON:0000926,3.58e-12,315;UBERON:0004120,3.58e-12,315;UBERON:0006603,3.58e-12,315 | |||
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|short_description=p8@MECP2 | |short_description=p8@MECP2 | ||
}} | }} |
Latest revision as of 01:48, 20 September 2015
Short description: | p8@MECP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MECP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -209bp_to_ENST00000481807_5end |
EntrezGene: | MECP2 |
HGNC: | 6990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.96e-123 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.96e-123 | 42 |
defensive cell | 3.91e-107 | 48 |
phagocyte | 3.91e-107 | 48 |
monopoietic cell | 1.48e-84 | 59 |
monocyte | 1.48e-84 | 59 |
monoblast | 1.48e-84 | 59 |
promonocyte | 1.48e-84 | 59 |
myeloid leukocyte | 6.63e-83 | 72 |
macrophage dendritic cell progenitor | 1.22e-81 | 61 |
myeloid lineage restricted progenitor cell | 4.08e-75 | 66 |
granulocyte monocyte progenitor cell | 6.32e-74 | 67 |
myeloid cell | 1.51e-53 | 108 |
common myeloid progenitor | 1.51e-53 | 108 |
leukocyte | 4.54e-44 | 136 |
nongranular leukocyte | 8.63e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 5.77e-39 | 120 |
hematopoietic stem cell | 1.46e-34 | 168 |
hematopoietic oligopotent progenitor cell | 4.94e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.94e-34 | 161 |
hematopoietic cell | 1.68e-32 | 177 |
basophil | 1.26e-16 | 3 |
mesenchymal cell | 3.93e-13 | 354 |
connective tissue cell | 9.41e-13 | 361 |
motile cell | 2.05e-11 | 386 |
stem cell | 3.77e-10 | 441 |
multi fate stem cell | 8.94e-10 | 427 |
somatic stem cell | 1.51e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-64 | 76 |
bone element | 1.64e-59 | 82 |
skeletal element | 9.20e-54 | 90 |
hematopoietic system | 2.46e-52 | 98 |
blood island | 2.46e-52 | 98 |
immune system | 7.37e-52 | 93 |
skeletal system | 7.42e-48 | 100 |
hemolymphoid system | 5.48e-47 | 108 |
musculoskeletal system | 2.19e-26 | 167 |
lateral plate mesoderm | 2.81e-22 | 203 |
connective tissue | 3.10e-12 | 371 |
mesoderm | 3.58e-12 | 315 |
mesoderm-derived structure | 3.58e-12 | 315 |
presumptive mesoderm | 3.58e-12 | 315 |