FFCP PHASE1:Hg19::chr19:55942972..55942977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=729956 | |EntrezGene=729956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=35409 | |HGNC=35409 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q8N9E6 | |UniProt=Q8N9E6 | ||
|association_with_transcript=-214bp_to_AK094959_5end | |association_with_transcript=-214bp_to_AK094959_5end | ||
|cluster_id=chr19:55942972..55942977,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_8_at_SHISA7_5end | |description=CAGE_peak_8_at_SHISA7_5end |
Latest revision as of 01:44, 20 September 2015
Short description: | p8@SHISA7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SHISA7_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -214bp_to_AK094959_5end |
EntrezGene: | SHISA7 |
HGNC: | 35409 |
UniProt: | Q8N9E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@SHISA7 |
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0.5
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2.5
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3.5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.55e-98 | 2 |
gyrus | 4.27e-34 | 6 |
temporal lobe | 1.78e-29 | 6 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
Showing 1 to 10 of 12 entries