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FFCP PHASE1:Hg19::chr19:55942972..55942977,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=
|DHSsupport=supported 
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=729956
|EntrezGene=729956
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=35409
|HGNC=35409
|TSSclassifier=not
|TSSclassifier=strong
|UniProt=Q8N9E6
|UniProt=Q8N9E6
|association_with_transcript=-214bp_to_AK094959_5end
|association_with_transcript=-214bp_to_AK094959_5end
|cluster_id=chr19:55942972..55942977,-
|coexpression_cluster_id=C16
|coexpression_cluster_id=C16
|description=CAGE_peak_8_at_SHISA7_5end
|description=CAGE_peak_8_at_SHISA7_5end

Latest revision as of 01:44, 20 September 2015

Short description:p8@SHISA7
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_SHISA7_5end
Coexpression cluster:C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain
Association with transcript: -214bp_to_AK094959_5end
EntrezGene:SHISA7
HGNC: 35409
UniProt: Q8N9E6
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data