FFCP PHASE1:Hg19::chr6:117002339..117002400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3841 | |EntrezGene=3841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6398 | |HGNC=6398 | ||
|TSSclassifier=strong | |||
|UniProt=O15131,Q5TD90 | |UniProt=O15131,Q5TD90 | ||
|association_with_transcript=0bp_to_ENST00000356348,ENST00000368564,ENST00000413340,NM_002269,uc003pxh.2_5end | |association_with_transcript=0bp_to_ENST00000356348,ENST00000368564,ENST00000413340,NM_002269,uc003pxh.2_5end | ||
|cluster_id=chr6:117002339..117002400,+ | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_1_at_KPNA5_5end | |description=CAGE_peak_1_at_KPNA5_5end | ||
|id=chr6:117002339..117002400,+ | |id=chr6:117002339..117002400,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.65e-10!53;CL:0000051!5.65e-10!53;CL:0000838!7.66e-10!52;CL:0000791!6.57e-09!18;CL:0000789!6.57e-09!18;CL:0002420!6.57e-09!18;CL:0002419!6.57e-09!18;CL:0000790!6.57e-09!18;CL:0000625!9.35e-07!11 | |ontology_enrichment_celltype=CL:0000542!5.65e-10!53;CL:0000051!5.65e-10!53;CL:0000838!7.66e-10!52;CL:0000791!6.57e-09!18;CL:0000789!6.57e-09!18;CL:0002420!6.57e-09!18;CL:0002419!6.57e-09!18;CL:0000790!6.57e-09!18;CL:0000625!9.35e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.46e-09;18!CL:0000789;6.46e-09;18!CL:0002419;6.46e-09;18!CL:0000625;8.52e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.65e-10,53;CL:0000051,5.65e-10,53;CL:0000838,7.66e-10,52;CL:0000791,6.57e-09,18;CL:0000789,6.57e-09,18;CL:0002420,6.57e-09,18;CL:0002419,6.57e-09,18;CL:0000790,6.57e-09,18;CL:0000625,9.35e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.05e-09;82!CL:0000790;6.46e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.51e-29!115;UBERON:0000073!4.31e-28!94;UBERON:0001016!4.31e-28!94;UBERON:0001017!9.67e-27!82;UBERON:0005743!7.39e-26!86;UBERON:0001049!3.66e-24!57;UBERON:0005068!3.66e-24!57;UBERON:0006241!3.66e-24!57;UBERON:0007135!3.66e-24!57;UBERON:0000955!1.14e-21!69;UBERON:0006238!1.14e-21!69;UBERON:0002616!3.58e-21!59;UBERON:0003080!4.85e-21!42;UBERON:0002780!1.03e-20!41;UBERON:0001890!1.03e-20!41;UBERON:0006240!1.03e-20!41;UBERON:0002346!6.01e-18!90;UBERON:0002020!3.17e-17!34;UBERON:0003528!3.17e-17!34;UBERON:0001893!1.03e-16!34;UBERON:0003075!1.84e-16!86;UBERON:0007284!1.84e-16!86;UBERON:0002791!2.78e-16!33;UBERON:0001869!2.90e-16!32;UBERON:0002619!1.68e-13!22;UBERON:0000956!5.56e-13!25;UBERON:0000203!5.56e-13!25;UBERON:0003056!9.65e-13!61;UBERON:0001950!1.86e-12!20;UBERON:0000153!6.70e-12!129;UBERON:0007811!6.70e-12!129;UBERON:0000924!6.74e-12!173;UBERON:0006601!6.74e-12!173;UBERON:0004121!8.35e-11!169;UBERON:0000033!1.23e-10!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.84e-15;41!UBERON:0001890;4.84e-15;41!UBERON:0003528;7.95e-15;34!UBERON:0002020;7.95e-15;34!UBERON:0001869;8.48e-15;32!UBERON:0002791;9.51e-15;32!UBERON:0001893;2.57e-14;34!UBERON:0002619;1.77e-13;22!UBERON:0000073;3.44e-13;53!UBERON:0002616;3.44e-13;53!UBERON:0000956;6.09e-13;25!UBERON:0000203;6.09e-13;25!UBERON:0001950;1.97e-12;20!UBERON:0001016;9.93e-11;83!UBERON:0001017;9.99e-11;75!UBERON:0000955;4.14e-10;68!UBERON:0007023;1.17e-08;114!UBERON:0000922;1.35e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.39e-28,89;UBERON:0007023,1.83e-28,114;UBERON:0001017,2.21e-26,81;UBERON:0001049,8.07e-24,56;UBERON:0005068,8.07e-24,56;UBERON:0006241,8.07e-24,56;UBERON:0007135,8.07e-24,56;UBERON:0000073,2.31e-22,53;UBERON:0002616,2.31e-22,53;UBERON:0000955,2.53e-21,68;UBERON:0006238,2.53e-21,68;UBERON:0002780,1.03e-20,41;UBERON:0001890,1.03e-20,41;UBERON:0003080,1.03e-20,41;UBERON:0006240,1.03e-20,41;UBERON:0002346,2.71e-17,86;UBERON:0003528,3.17e-17,34;UBERON:0002020,3.17e-17,34;UBERON:0001893,1.03e-16,34;UBERON:0001869,2.90e-16,32;UBERON:0002791,3.38e-16,32;UBERON:0003075,8.14e-16,82;UBERON:0007284,8.14e-16,82;UBERON:0002619,1.68e-13,22;UBERON:0000956,5.56e-13,25;UBERON:0000203,5.56e-13,25;UBERON:0003056,7.21e-13,61;UBERON:0001950,1.86e-12,20;UBERON:0011216,3.77e-11,223;UBERON:0004121,4.15e-11,171;UBERON:0000924,4.15e-11,171;UBERON:0006601,4.15e-11,171;UBERON:0010371,1.85e-08,104;UBERON:0010314,2.65e-07,132 | |||
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| ||
|short_description=p1@KPNA5 | |short_description=p1@KPNA5 | ||
}} | }} |
Latest revision as of 01:26, 20 September 2015
Short description: | p1@KPNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KPNA5_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000356348, ENST00000368564, ENST00000413340, NM_002269, uc003pxh.2_5end |
EntrezGene: | KPNA5 |
HGNC: | 6398 |
UniProt: | O15131Q5TD90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.65e-10 | 53 |
common lymphoid progenitor | 5.65e-10 | 53 |
lymphoid lineage restricted progenitor cell | 7.66e-10 | 52 |
mature alpha-beta T cell | 6.57e-09 | 18 |
alpha-beta T cell | 6.57e-09 | 18 |
immature T cell | 6.57e-09 | 18 |
mature T cell | 6.57e-09 | 18 |
immature alpha-beta T cell | 6.57e-09 | 18 |
CD8-positive, alpha-beta T cell | 9.35e-07 | 11 |