FFCP PHASE1:Hg19::chr17:38497640..38497647,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUP8 | |UniProt=A8MUP8 | ||
|association_with_transcript=0bp_to_ENST00000394086_5end | |association_with_transcript=0bp_to_ENST00000394086_5end | ||
|cluster_id=chr17:38497640..38497647,+ | |||
|coexpression_cluster_id=C297 | |coexpression_cluster_id=C297 | ||
|description=CAGE_peak_27_at_RARA_5end | |description=CAGE_peak_27_at_RARA_5end | ||
|id=chr17:38497640..38497647,+ | |id=chr17:38497640..38497647,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.89e-15!140;CL:0002057!2.18e-13!42;CL:0000766!8.99e-13!76;CL:0002031!2.69e-12!124;CL:0000860!4.02e-12!45;CL:0000037!9.43e-12!172;CL:0000566!9.43e-12!172;CL:0002032!4.37e-11!165;CL:0000837!4.37e-11!165;CL:0000988!1.89e-10!182;CL:0002087!2.64e-10!119;CL:0000624!9.24e-09!6;CL:0000839!1.31e-08!70;CL:0000557!2.09e-08!71;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000898!1.80e-07!3;CL:0000763!5.18e-07!112;CL:0000049!5.18e-07!112;CL:0002194!5.54e-07!63;CL:0000576!5.54e-07!63;CL:0000040!5.54e-07!63;CL:0000559!5.54e-07!63 | |ontology_enrichment_celltype=CL:0000738!2.89e-15!140;CL:0002057!2.18e-13!42;CL:0000766!8.99e-13!76;CL:0002031!2.69e-12!124;CL:0000860!4.02e-12!45;CL:0000037!9.43e-12!172;CL:0000566!9.43e-12!172;CL:0002032!4.37e-11!165;CL:0000837!4.37e-11!165;CL:0000988!1.89e-10!182;CL:0002087!2.64e-10!119;CL:0000624!9.24e-09!6;CL:0000839!1.31e-08!70;CL:0000557!2.09e-08!71;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000898!1.80e-07!3;CL:0000763!5.18e-07!112;CL:0000049!5.18e-07!112;CL:0002194!5.54e-07!63;CL:0000576!5.54e-07!63;CL:0000040!5.54e-07!63;CL:0000559!5.54e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.47e-26;2!CL:0000097;3.10e-23;5!CL:0000898;1.33e-17;3!CL:0000094;7.82e-15;8!CL:0000037;1.18e-13;1!CL:0001024;1.18e-13;1!CL:0000895;1.18e-13;1!CL:0000163;3.37e-13;9!CL:0000081;5.99e-11;11!CL:0000624;2.83e-09;6!CL:0000815;1.20e-07;2!CL:0000792;1.20e-07;2!CL:0002677;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.47e-26,2;CL:0000097,2.57e-23,5;CL:0002028,2.57e-23,5;CL:0000898,9.14e-18,3;CL:0000094,8.01e-15,8;CL:0000810,6.65e-14,1;CL:0000895,6.65e-14,1;CL:0002436,6.65e-14,1;CL:0002427,6.65e-14,1;CL:0002428,6.65e-14,1;CL:0002429,6.65e-14,1;CL:0002433,6.65e-14,1;CL:0002431,6.65e-14,1;CL:0002432,6.65e-14,1;CL:0001024,1.42e-13,1;CL:0000163,3.04e-13,9;CL:0000081,6.10e-11,11;CL:0000624,2.35e-09,6;CL:0000766,7.66e-08,72;CL:0000815,1.20e-07,2;CL:0000792,1.20e-07,2;CL:0002677,1.20e-07,2;CL:0000893,1.36e-07,2;CL:0002489,1.36e-07,2;CL:0000809,1.36e-07,2;CL:0000808,1.36e-07,2;CL:0000894,1.36e-07,2;CL:0000806,1.36e-07,2;CL:0000807,1.36e-07,2;CL:0000805,1.36e-07,2;CL:0002425,1.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;1.18e-13;1!CL:0002425;1.81e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.24e-08!102;UBERON:0003061!3.24e-08!102;UBERON:0002371!1.06e-07!80;UBERON:0001474!1.51e-07!86;UBERON:0002193!1.86e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!3.24e-08!102;UBERON:0003061!3.24e-08!102;UBERON:0002371!1.06e-07!80;UBERON:0001474!1.51e-07!86;UBERON:0002193!1.86e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,1.17440175733939,1.10799081706375,0,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,2.28145586643513,2.8406868344084,0,0.111410456885174,0.589211814949674,0,0.812411591295047,0,0,0,0,0,1.4828656316206,0.535081656179426,1.04535523804977,0,1.91610246800961,1.37450978193052,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,2.16179930125442,4.16600030307054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,1.17440175733939,1.10799081706375,0,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,2.28145586643513,2.8406868344084,0,0.111410456885174,0.589211814949674,0,0.812411591295047,0,0,0,0,0,1.4828656316206,0.535081656179426,1.04535523804977,0,1.91610246800961,1.37450978193052,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,2.16179930125442,4.16600030307054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@RARA | |short_description=p27@RARA | ||
}} | }} |
Latest revision as of 01:12, 20 September 2015
Short description: | p27@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_RARA_5end |
Coexpression cluster: | C297_Eosinophils_CD4_Basophils_Natural_Neutrophils_CD8_Peripheral |
Association with transcript: | 0bp_to_ENST00000394086_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | A8MUP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data