FFCP PHASE1:Hg19::chr19:55795351..55795394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84446 | |EntrezGene=84446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18994 | |HGNC=18994 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDC3 | |UniProt=Q8TDC3 | ||
|association_with_transcript=-139bp_to_ENST00000309383,NM_032430,uc002qkg.2_5end | |association_with_transcript=-139bp_to_ENST00000309383,NM_032430,uc002qkg.2_5end | ||
|cluster_id=chr19:55795351..55795394,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_BRSK1_5end | |description=CAGE_peak_1_at_BRSK1_5end | ||
|id=chr19:55795351..55795394,+ | |id=chr19:55795351..55795394,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.92e-10!180;CL:0000133!3.04e-09!59;CL:0002319!2.27e-08!25;CL:0000393!8.25e-07!60;CL:0000211!8.25e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.92e-10!180;CL:0000133!3.04e-09!59;CL:0002319!2.27e-08!25;CL:0000393!8.25e-07!60;CL:0000211!8.25e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.77e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,7.33e-08,59;CL:0002319,2.17e-07,25;CL:0000047,4.89e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;4.68e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.92e-07,10;DOID:3095,6.65e-07,22;DOID:2994,6.65e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;7.72e-27;34!UBERON:0002780;1.52e-26;41!UBERON:0001890;1.52e-26;41!UBERON:0001869;1.68e-26;32!UBERON:0003528;1.74e-26;34!UBERON:0002020;1.74e-26;34!UBERON:0002791;3.01e-26;32!UBERON:0000073;6.22e-26;53!UBERON:0002616;6.22e-26;53!UBERON:0000956;6.12e-23;25!UBERON:0000203;6.12e-23;25!UBERON:0002619;1.53e-21;22!UBERON:0001950;1.35e-19;20!UBERON:0000955;3.85e-19;68!UBERON:0001016;4.69e-18;83!UBERON:0001017;7.98e-18;75!UBERON:0002420;1.29e-09;9!UBERON:0007245;1.29e-09;9!UBERON:0010009;1.29e-09;9!UBERON:0010011;1.29e-09;9!UBERON:0000454;1.29e-09;9!UBERON:0000125;2.42e-09;9!UBERON:0002308;2.42e-09;9!UBERON:0004732;1.04e-08;13!UBERON:0004733;1.92e-08;12!UBERON:0002028;1.92e-08;12!UBERON:0009663;1.22e-07;7!UBERON:0000200;1.68e-07;6!UBERON:0001894;2.17e-07;7 | |||
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| ||
|short_description=p1@BRSK1 | |short_description=p1@BRSK1 | ||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p1@BRSK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRSK1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -139bp_to_ENST00000309383, NM_032430, uc002qkg.2_5end |
EntrezGene: | BRSK1 |
HGNC: | 18994 |
UniProt: | Q8TDC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 7.33e-08 | 59 |
neural cell | 2.17e-07 | 25 |
neuronal stem cell | 4.89e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.92e-07 | 10 |
germ cell and embryonal cancer | 6.65e-07 | 22 |
germ cell cancer | 6.65e-07 | 22 |