FFCP PHASE1:Hg19::chr3:12329464..12329472,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:12329464..12329472,+
|short_description=p6@PPARG
|description=CAGE_peak_6_at_PPARG_5end
|association_with_transcript=64bp_to_ENST00000397015_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5468 | |EntrezGene=5468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |HGNC=9236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000397015_5end | |||
|cluster_id=chr3:12329464..12329472,+ | |||
|coexpression_cluster_id=C2220 | |||
|description=CAGE_peak_6_at_PPARG_5end | |||
|id=chr3:12329464..12329472,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.81e-16!45;CL:0002057!2.20e-14!42;CL:0002194!2.39e-13!63;CL:0000576!2.39e-13!63;CL:0000040!2.39e-13!63;CL:0000559!2.39e-13!63;CL:0002009!2.39e-12!65;CL:0000839!8.38e-11!70;CL:0000557!2.14e-10!71;CL:0000766!4.72e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-40;33!CL:0002057;1.23e-40;33!CL:0000473;5.29e-28;39!CL:0000234;5.29e-28;39!CL:0000576;6.19e-19;48!CL:0000766;7.40e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.58e-36,42;CL:0002057,5.58e-36,42;CL:0000473,2.81e-30,48;CL:0000234,2.81e-30,48;CL:0002194,2.40e-22,59;CL:0000576,2.40e-22,59;CL:0000040,2.40e-22,59;CL:0000559,2.40e-22,59;CL:0002009,2.50e-21,61;CL:0000839,4.65e-19,66;CL:0000557,1.20e-18,67;CL:0000766,9.24e-17,72;CL:0000763,1.64e-08,108;CL:0000049,1.64e-08,108;CL:0002087,1.51e-07,115;CL:0002031,6.16e-07,120;CL:0002320,6.31e-07,361;CL:0000136,7.20e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.13e-14!448;UBERON:0004120!1.13e-14!448;UBERON:0006603!1.13e-14!448;UBERON:0002405!3.05e-12!115;UBERON:0000062!4.16e-11!511;UBERON:0002371!3.73e-10!80;UBERON:0000923!3.74e-10!604;UBERON:0005291!3.74e-10!604;UBERON:0006598!3.74e-10!604;UBERON:0002532!3.74e-10!604;UBERON:0002050!5.30e-10!605;UBERON:0005423!5.30e-10!605;UBERON:0000468!5.34e-10!659;UBERON:0000467!1.05e-09!625;UBERON:0000922!1.29e-09!612;UBERON:0000480!1.48e-09!626;UBERON:0001474!2.94e-09!86;UBERON:0002204!3.40e-09!167;UBERON:0004765!6.63e-09!101;UBERON:0001434!6.63e-09!101;UBERON:0000481!8.43e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.27e-17,90;UBERON:0002371,1.15e-16,76;UBERON:0001434,1.35e-15,100;UBERON:0002405,4.14e-15,93;UBERON:0001474,8.17e-15,82;UBERON:0002193,9.75e-12,108;UBERON:0002204,1.78e-11,167;UBERON:0002390,4.98e-11,98;UBERON:0003061,4.98e-11,98;UBERON:0002384,3.19e-07,371 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,0.893922188854576,0,0,1.26343974685366,3.91778442299758,0.737201809504527,0.697801167972428,0.436882744260345,0.527533956456907,1.8564952944007,1.32558950291166,0.672325146451775,0,0,0,0.738726348460727,1.22400414746552,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0,0.434021741431704,0.447830948479849,0.647787332037959,0.77272670290256,0.726991193897824,5.29026321164333,4.60909716256851,2.55671940596253,9.45686142450199,7.74265927237759,6.04154023876516,7.17249978281482,4.49316236788312,2.75796544589295,1.93645405075148,1.35426486594342,1.31769637679823,7.09555990150399,3.82029923556644,2.44867113896722,5.1348644332175,5.11469700639233,1.31940520074686,3.39088217956774,2.98357325372886,2.61188314765726,2.8369261234557,3.73693349397345,8.03995728821578,6.77927793946262,6.73285418585862,0,4.41933163185078,3.79754864929061,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.527008714158756,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.516833518338658,1.06729878806013,1.33888245105868,0.402829317109147,0,1.95249646038536,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,2.17847724779836,0.404132016209064,0.490385709340376,0.756787138224657,1.72852777344,2.10889288650417,2.18512053781224,1.1409436430889,1.34503812496621,0.822041490506354,0.485618833104395,0.842704840213491,0.816616685019573,0.982674538494144,1.75653827998801,1.18800285728205,0.247266929278557,1.82032272387605,0,1.5150250255866,0.625592599359821,0.554128230968366,0,0,0.300476117813194,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.964044119533928,0.55146986366197,0.871517776369625,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,1.4763109092493,0,0,0,2.53510069643662,3.9313088667105,2.36315962672562,0,1.47586126251736,0.343135620597051,0,0,0,0,2.93227474779292,1.03993478527958,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.951270761172991,0.790204397959275,0,0.246217006087397,0.936017060556951,0.594524649154913,0,0,0,0.179117045405697,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.66004457238855,0,0,0,0,0,0.257207374262142,1.41849132023278,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.434343920002738,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,1.62759014219841,0.207970861530807,0,0,0.234282829985426,0.601892199455438,0,3.10419213877515,0,0,1.04260337361699,0,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0.604780586659361,0,0,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0.616838775210622,0.710246901252508,0.328508624055237,0,0.348631135379878,0.241718899183244,0.40101294060657,0.184161977871793,0.68888668898764,0.910455840033585,1.31124414959424,0.451199612907412,0.385076685522074,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0.412164046590889,0,0,0,0,0,0.580024309752732,2.15668063960502,0.921022048356777,0.413509717453592,0.966782203814463,1.16013355131383,0.681813019328807,0.267096106940212,0.165284915360978,0.192190067365106,0,0.4046311234222,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,1.86079184679834,0.316379424718726,0.762520775695299,0.511795582622668,2.56763392820352,0.318203247925937,0,0,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.707027159768564,0,0,0.66343897524122,0,1.73632660280006,4.59126326432643,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0.987884678879706,0.75894634753143,1.04980416073495,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,2.05854594449042,3.22317994398167,0,0,1.13654458722565,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0.269605053441981,0.895105873378046,0,0.197286811273867,0,0,0,0,0,0,0,2.17499872630438,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0.113942055847001,2.3056390438806,1.6156375993759,1.95565269459615,0.957003479195758,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0.6529312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| ||
|short_description=p6@PPARG | |||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p6@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPARG_5end |
Coexpression cluster: | C2220_CD14_mature_chorionic_adipose_breast_Cardiac_choriocarcinoma |
Association with transcript: | 64bp_to_ENST00000397015_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.58e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.58e-36 | 42 |
defensive cell | 2.81e-30 | 48 |
phagocyte | 2.81e-30 | 48 |
monopoietic cell | 2.40e-22 | 59 |
monocyte | 2.40e-22 | 59 |
monoblast | 2.40e-22 | 59 |
promonocyte | 2.40e-22 | 59 |
macrophage dendritic cell progenitor | 2.50e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.65e-19 | 66 |
granulocyte monocyte progenitor cell | 1.20e-18 | 67 |
myeloid leukocyte | 9.24e-17 | 72 |
myeloid cell | 1.64e-08 | 108 |
common myeloid progenitor | 1.64e-08 | 108 |
nongranular leukocyte | 1.51e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.16e-07 | 120 |
connective tissue cell | 6.31e-07 | 361 |
fat cell | 7.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.27e-17 | 90 |
bone marrow | 1.15e-16 | 76 |
skeletal system | 1.35e-15 | 100 |
immune system | 4.14e-15 | 93 |
bone element | 8.17e-15 | 82 |
hemolymphoid system | 9.75e-12 | 108 |
musculoskeletal system | 1.78e-11 | 167 |
hematopoietic system | 4.98e-11 | 98 |
blood island | 4.98e-11 | 98 |
connective tissue | 3.19e-07 | 371 |