FFCP PHASE1:Hg19::chr2:214015111..214015179,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:214015111..214015179,- to FFCP PHASE1:Hg19::chr2:214015111..214015179,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22807 | |EntrezGene=22807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13177 | |HGNC=13177 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUI1 | |UniProt=E7EUI1 | ||
|association_with_transcript=0bp_to_ENST00000433134_5end | |||
|cluster_id=chr2:214015111..214015179,- | |||
|coexpression_cluster_id=C2687 | |||
|description=CAGE_peak_1_at_IKZF2_5end | |||
|id=chr2:214015111..214015179,- | |||
|ontology_enrichment_celltype=CL:0000542!7.08e-09!53;CL:0000051!7.08e-09!53;CL:0000838!2.05e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.19e-09,53;CL:0000051,4.19e-09,53;CL:0000838,1.38e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-20!115;UBERON:0001049!1.56e-12!57;UBERON:0005068!1.56e-12!57;UBERON:0006241!1.56e-12!57;UBERON:0007135!1.56e-12!57;UBERON:0002616!3.10e-12!59;UBERON:0000153!1.56e-10!129;UBERON:0007811!1.56e-10!129;UBERON:0003080!2.83e-10!42;UBERON:0002780!8.95e-10!41;UBERON:0001890!8.95e-10!41;UBERON:0006240!8.95e-10!41;UBERON:0000955!1.96e-09!69;UBERON:0006238!1.96e-09!69;UBERON:0001017!3.04e-09!82;UBERON:0000033!7.07e-09!123;UBERON:0002346!9.92e-09!90;UBERON:0002020!1.58e-08!34;UBERON:0003528!1.58e-08!34;UBERON:0005743!3.79e-08!86;UBERON:0003075!4.08e-08!86;UBERON:0007284!4.08e-08!86;UBERON:0002791!7.98e-08!33;UBERON:0001893!9.67e-08!34;UBERON:0000924!1.11e-07!173;UBERON:0006601!1.11e-07!173;UBERON:0004121!3.66e-07!169;UBERON:0001869!3.92e-07!32;UBERON:0003056!7.84e-07!61;UBERON:0000073!7.96e-07!94;UBERON:0001016!7.96e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.08e-07;41!UBERON:0001890;3.08e-07;41!UBERON:0003528;6.96e-07;34!UBERON:0002020;6.96e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.66e-19,114;UBERON:0001049,1.16e-11,56;UBERON:0005068,1.16e-11,56;UBERON:0006241,1.16e-11,56;UBERON:0007135,1.16e-11,56;UBERON:0000073,2.01e-10,53;UBERON:0002616,2.01e-10,53;UBERON:0002346,4.95e-10,86;UBERON:0002780,1.91e-09,41;UBERON:0001890,1.91e-09,41;UBERON:0003080,1.91e-09,41;UBERON:0006240,1.91e-09,41;UBERON:0003075,2.25e-09,82;UBERON:0007284,2.25e-09,82;UBERON:0000955,5.40e-09,68;UBERON:0006238,5.40e-09,68;UBERON:0001017,6.81e-09,81;UBERON:0004121,2.82e-08,171;UBERON:0000924,2.82e-08,171;UBERON:0006601,2.82e-08,171;UBERON:0010371,5.01e-08,104;UBERON:0003528,5.41e-08,34;UBERON:0002020,5.41e-08,34;UBERON:0001016,1.34e-07,89;UBERON:0003056,2.70e-07,61;UBERON:0001893,3.55e-07,34;UBERON:0002791,5.08e-07,32 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.704772020479856,3.00219895059391,0.446961094427288,0,0,1.26343974685366,0,0,0,2.18441372130172,1.05506791291381,7.1784484716827,6.95934489028623,0.672325146451775,0,0.730310090387373,0,0.738726348460727,1.42800483870977,1.25381888591235,4.00730381983479,1.50561867580173,1.75759695432724,26.2097981715473,18.7189343945876,19.5202737657925,1.18009283054671,2.30297638858328,1.54816123316076,0.919421224478927,0.30120591877825,0,0.542270404062111,1.42169232487422,2.34880351467878,1.66198622559563,0.200544447470142,0,0.447830948479849,0.32389366601898,0.515151135268373,0.290796477559129,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0,0,0,1.37898272294647,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.27683166757279,3.55803701545422,3.41384178053206,1.60158394814405,1.14950487990897,0.661044872784862,1.90810750907073,3.98449078376614,0.587237189370939,1.52909291250092,2.64342657158052,0.560508562981536,0.790152254325231,1.180258620683,0.786021525498329,2.05601498999509,12.5389871543009,13.6887351986108,11.8361951433683,5.84480185223734,3.00808233589969,9.72199494666963,10.6336269400138,9.20733136801053,4.99556146930133,6.50296737799391,10.1951500854279,8.5668505513613,5.21645554323094,0.889719378972363,1.60524496853828,1.04535523804977,1.58633079776593,0.766440987203842,2.06176467289578,1.51811815211702,1.27426165729639,2.60433381542567,1.90090408889675,1.80690142893327,2.94369205655162,0,2.8413270245282,3.28451198768419,3.02410114837099,0.267440195783507,1.01377082717959,2.43806866313962,0.670700859703636,0.511450247374121,0,1.00267582127178,0.144846518960824,0,0,3.02511414925017,1.55210578223795,1.58102614247627,1.70272798147026,0,1.11235332835329,0.97364218096405,0,0.531831842075461,2.38490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.926864265692532,1.14734648299525,0.354668382198357,0,1.06748995729705,0.49333509683432,3.42332138939743,4.04132016209064,1.79808093424805,3.93529311876822,0.576175924479999,1.64025002283658,0.312160076830321,0,0.597794722207204,0.117434498643765,0.161872944368132,0,4.08308342509786,0.491337269247072,0.826606249406124,2.37600571456411,0.494533858557114,0.910161361938026,0,0.336672227908132,2.25213335769535,1.10825646193673,1.31693286264251,0,0.300476117813194,3.06266894532057,1.79389635688862,1.92201649936711,4.02670612203168,6.90209520994125,2.88547081867629,2.83404594050192,0.744467425326359,2.53164498361899,0.876933046450788,5.55354303337052,4.23429533754577,8.56724101139703,1.06502877754984,1.20902517873168,0.508681776931463,0.966304265816484,0.272746120590835,2.00763216772303,0.487894824518382,0.265059536642971,0.348581828608555,1.14027160516907,0,0.72995471815166,1.56449532329816,1.28648187638577,1.38134921352481,20.8965567614391,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.5975184209778,0.491953754172454,1.20097467208968,0.219500570817251,0,2.71428225511403,0.833296006426766,0,1.03993478527958,0,1.27523445472584,1.29149563659404,0,0,0,0.790204397959275,0,0.246217006087397,0.234004265139238,0.594524649154913,0,1.00789276919316,1.55952606966625,2.32852159027406,1.74380363108377,0,38.4277325558836,1.76096868026452,0.829312462163088,0.576479813667846,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,1.30788020649984,0.66004457238855,0.258543431515556,10.7296933755565,0,0,1.04007436911366,5.14414748524284,8.5109479213967,5.06202140130589,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,0,5.50168965336801,7.19167128926342,0.358121926479791,2.91421374383171,9.06341496928865,1.94064817373566,1.66845947163673,2.03275699377971,1.30139853857622,0,0.335032530668698,0,2.24702107184155,8.97484377612075,1.24324654030811,17.6675748075561,18.5063092792081,4.06897535549603,2.49565033836969,0.535286966391485,1.89242898040722,2.34282829985426,1.50473049863859,0,1.03473071292505,1.32845119707087,0.368738337083406,2.60650843404249,0,1.37257369524342,1.6541442089831,1.50999940573032,2.13455115606889,0,1.66435439510497,0,1.73675465473144,3.06923946576125,1.68396056659844,0.256278298511402,0,0,0,1.23367755042124,0,1.88892458831761,1.03850885836724,1.04589340613963,0,4.81215528727884,3.68323955743585,0,0.364182336013434,0,0.451199612907412,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,0.254876273045038,0.831076008928724,0,0.877039506583738,1.3071772551245,0,0,0,4.01859945426117,1.55668090191184,2.55779449753823,0,1.30012049207304,0,0.676695028044854,3.69716681075147,4.45160656705776,1.37836572484531,13.4275306085342,2.90033387828457,1.70453254832202,0.356128142586949,0.826424576804891,0.192190067365106,7.2739246121913,0.30347334256665,1.85938219718914,4.40737285562896,0.6970372701606,2.7723022215848,0,1.73986598415015,1.66791797193528,1.5743737541619,1.48863347743867,3.796553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| ||
|short_description=p1@IKZF2 | |||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p1@IKZF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IKZF2_5end |
Coexpression cluster: | C2687_thymus_acute_Hodgkin_Mast_migratory_plasma_diffuse |
Association with transcript: | 0bp_to_ENST00000433134_5end |
EntrezGene: | IKZF2 |
HGNC: | 13177 |
UniProt: | E7EUI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.19e-09 | 53 |
common lymphoid progenitor | 4.19e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.38e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.66e-19 | 114 |
neural tube | 1.16e-11 | 56 |
neural rod | 1.16e-11 | 56 |
future spinal cord | 1.16e-11 | 56 |
neural keel | 1.16e-11 | 56 |
regional part of nervous system | 2.01e-10 | 53 |
regional part of brain | 2.01e-10 | 53 |
neurectoderm | 4.95e-10 | 86 |
regional part of forebrain | 1.91e-09 | 41 |
forebrain | 1.91e-09 | 41 |
anterior neural tube | 1.91e-09 | 41 |
future forebrain | 1.91e-09 | 41 |
neural plate | 2.25e-09 | 82 |
presumptive neural plate | 2.25e-09 | 82 |
brain | 5.40e-09 | 68 |
future brain | 5.40e-09 | 68 |
central nervous system | 6.81e-09 | 81 |
ectoderm-derived structure | 2.82e-08 | 171 |
ectoderm | 2.82e-08 | 171 |
presumptive ectoderm | 2.82e-08 | 171 |
ecto-epithelium | 5.01e-08 | 104 |
brain grey matter | 5.41e-08 | 34 |
gray matter | 5.41e-08 | 34 |
nervous system | 1.34e-07 | 89 |
pre-chordal neural plate | 2.70e-07 | 61 |
telencephalon | 3.55e-07 | 34 |
regional part of telencephalon | 5.08e-07 | 32 |