FFCP PHASE1:Hg19::chr9:110251836..110251887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9314 | |EntrezGene=9314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |HGNC=6348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000374672_5end | |association_with_transcript=39bp_to_ENST00000374672_5end | ||
|cluster_id=chr9:110251836..110251887,- | |||
|description=CAGE_peak_4_at_KLF4_5end | |description=CAGE_peak_4_at_KLF4_5end | ||
|id=chr9:110251836..110251887,- | |id=chr9:110251836..110251887,- | ||
|ontology_enrichment_celltype=CL:0002057!1.38e-18!42;CL:0000860!3.86e-18!45;CL:0000557!5.94e-11!71;CL:0000766!3.02e-10!76;CL:0002009!3.21e-10!65;CL:0002194!1.82e-09!63;CL:0000576!1.82e-09!63;CL:0000040!1.82e-09!63;CL:0000559!1.82e-09!63;CL:0000839!5.83e-09!70;CL:0002393!1.07e-07!9;CL:0002397!1.07e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.38e-18!42;CL:0000860!3.86e-18!45;CL:0000557!5.94e-11!71;CL:0000766!3.02e-10!76;CL:0002009!3.21e-10!65;CL:0002194!1.82e-09!63;CL:0000576!1.82e-09!63;CL:0000040!1.82e-09!63;CL:0000559!1.82e-09!63;CL:0000839!5.83e-09!70;CL:0002393!1.07e-07!9;CL:0002397!1.07e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-13;33!CL:0002057;3.59e-13;33!CL:0000576;3.04e-11;48!CL:0000473;1.08e-08;39!CL:0000234;1.08e-08;39!CL:0000766;8.90e-08;69!CL:0002393;2.83e-07;6!CL:0002397;2.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-22,42;CL:0002057,1.13e-22,42;CL:0000473,6.02e-18,48;CL:0000234,6.02e-18,48;CL:0000557,5.46e-15,67;CL:0000766,2.46e-14,72;CL:0002009,1.92e-13,61;CL:0000839,1.33e-12,66;CL:0002194,2.22e-12,59;CL:0000576,2.22e-12,59;CL:0000040,2.22e-12,59;CL:0000559,2.22e-12,59;CL:0002393,4.02e-10,9;CL:0002397,4.02e-10,9;CL:0000763,8.14e-07,108;CL:0000049,8.14e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.12e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!3.05e-13!511;UBERON:0001474!1.39e-08!86;UBERON:0004765!1.69e-08!101;UBERON:0001434!1.69e-08!101;UBERON:0002371!9.50e-08!80;UBERON:0000468!1.16e-07!659;UBERON:0000926!2.17e-07!448;UBERON:0004120!2.17e-07!448;UBERON:0006603!2.17e-07!448 | |ontology_enrichment_uberon=UBERON:0000062!3.05e-13!511;UBERON:0001474!1.39e-08!86;UBERON:0004765!1.69e-08!101;UBERON:0001434!1.69e-08!101;UBERON:0002371!9.50e-08!80;UBERON:0000468!1.16e-07!659;UBERON:0000926!2.17e-07!448;UBERON:0004120!2.17e-07!448;UBERON:0006603!2.17e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-12,76;UBERON:0001474,8.27e-12,82;UBERON:0004765,1.39e-10,90;UBERON:0001434,2.23e-09,100;UBERON:0002390,6.09e-09,98;UBERON:0003061,6.09e-09,98;UBERON:0005631,1.93e-08,14;UBERON:0000158,1.93e-08,14;UBERON:0002405,2.88e-08,93;UBERON:0002193,2.66e-07,108 | |||
|phase1_expression=1.2717486548939,0.214100523890983,1.26858963686374,0,0,1.74467704820074,2.53299878168311,0,0,0,0,8.30077214094655,10.8144461073666,0.74259811776028,1.98838425436749,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8341069212226,9.21190555433311,21.5194411409346,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0,6.09394949385065,9.02450013615638,17.577880527984,0,0,0,1.30858414901608,0.755751887377619,0.727752183563449,1.85943229524548,0.822335776043652,2.16794459626573,1.1507695692886,4.86705342405291,3.07426898855161,6.89491361473237,3.87290810150296,5.41705946377367,1.69418105588344,1.09162460023138,1.12361742222542,2.75475503133812,1.28371610830437,5.75403413219137,2.96866170168044,2.99195486432448,4.68847225585964,4.06292934080018,1.13477044938228,1.86846674698672,5.27622197039161,3.65038042894141,3.25783267057675,1.81619850790011,1.47311054395026,1.89877432464531,10.985274888221,9.14198489849687,10.063614984402,6.29040334420373,11.4134438559545,7.87555374815693,17.3857773682162,9.54800050555633,11.1425133796427,0,0,0,0,0,0,0.661044872784862,0,2.27685187643779,0.587237189370939,1.91136614062614,1.32171328579026,0,0.526768169550154,0,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,1.80719576192283,0,1.44846518960824,1.5905718941022,3.89307896242109,0,0,0.087834785693126,2.88153966094968,1.82147644146271,2.59549109949101,0.649094787309367,0.348259474598534,0.132957960518865,1.90792499444274,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,4.96971951695318,0.506522046658319,0.794455084879313,5.16305917347865,1.77334191099179,2.80338800071154,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,0,1.87457145467037,1.5608003841516,0,0.896692083310806,0.469737994575059,0.647491777472526,0.140450806702248,0.408308342509787,0.859840221182376,1.75653827998801,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0.877955241761676,0.612975591598039,0.901428353439581,0.113432183160021,0.358779271377724,0,0.635795703478686,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,1.35021065793013,0.194874010322397,0.504867548488229,0.276149695926898,2.10139873864455,2.84007674013291,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0,0,0,0,0,0.928735856063958,0,0.473227200159376,0.505754070234305,0.241011029883482,0.441175890929576,1.30727666455444,0.237270619111097,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,2.95394953340702,0,0,0,0.548751427043128,1.1240175325762,0.100528972411631,0.648119116109707,0.977424915930974,2.07986957055916,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,3.1608175918371,4.29243081047436,0,0,0.148631162288728,0.93733833986777,0,0.141775097242386,1.34337784054272,0.871901815541886,0,0,0,8.70778085271243,6.3412779503463,5.93339437103986,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0,0.387815147273333,0,0.845302752556,0.26593811658487,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,1.19812427745791,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,2.1673383622212,0,1.92514554419623,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,1.62759014219841,0.207970861530807,0.713715955188647,0.788512075169673,0.468565659970853,1.50473049863859,2.27407504055985,4.1389228517002,0,0.184369168541703,1.91143951829782,0.195801157462741,0.343143423810856,1.6541442089831,7.11856862701436,3.842192080924,3.94065842880137,4.99306318531491,16.9338564264621,2.48107807818777,2.76231551918512,0.841980283299221,3.33161788064823,1.02341449813341,1.28683136914886,0,0,0.177561725313127,0.246381468041427,0,0.464841513839837,0,0,2.30202472339741,0.34444334449382,0.182091168006717,0,0.902399225814824,0.15403067420883,0,1.46139224653261,0,0,0,0,0,0.270946437543853,0,0.509752546090077,4.98645605357235,0,0,0,0,0,0,1.23649213977267,0.54941678891006,0.495056999523528,0,0.650060246036521,0,0.96670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,1.15699440752685,2.49847087574638,1.27612712494584,1.71968227454435,1.85938219718914,1.88887408098384,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,1.58189712359363,0.190630193923825,0,1.71175595213568,0.636406495851874,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.989838023675989,6.78048699721457,0,0,0.438450885253763,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0,0.0982490410131212,0,0,5.69990615303693,3.95153871551882,0.379473173765715,0,0.288666338176536,3.35151137767894,0,1.31801321087491,0.43050537267123,0,1.33029046061003,0,0,0.764637207142375,0,0,0.822724546172388,0,0,0,0,0.962479855263359,1.22520107990516,0,0,0,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| ||
|short_description=p4@KLF4 | |short_description=p4@KLF4 | ||
}} | }} |
Latest revision as of 01:03, 20 September 2015
Short description: | p4@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000374672_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-22 | 42 |
defensive cell | 6.02e-18 | 48 |
phagocyte | 6.02e-18 | 48 |
granulocyte monocyte progenitor cell | 5.46e-15 | 67 |
myeloid leukocyte | 2.46e-14 | 72 |
macrophage dendritic cell progenitor | 1.92e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-12 | 66 |
monopoietic cell | 2.22e-12 | 59 |
monocyte | 2.22e-12 | 59 |
monoblast | 2.22e-12 | 59 |
promonocyte | 2.22e-12 | 59 |
intermediate monocyte | 4.02e-10 | 9 |
CD14-positive, CD16-positive monocyte | 4.02e-10 | 9 |
myeloid cell | 8.14e-07 | 108 |
common myeloid progenitor | 8.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.72e-12 | 76 |
bone element | 8.27e-12 | 82 |
skeletal element | 1.39e-10 | 90 |
skeletal system | 2.23e-09 | 100 |
hematopoietic system | 6.09e-09 | 98 |
blood island | 6.09e-09 | 98 |
extraembryonic membrane | 1.93e-08 | 14 |
membranous layer | 1.93e-08 | 14 |
immune system | 2.88e-08 | 93 |
hemolymphoid system | 2.66e-07 | 108 |