FFCP PHASE1:Hg19::chr5:125695908..125695916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6D8 | |UniProt=B7Z6D8 | ||
|association_with_transcript=84bp_to_ENST00000513040_5end | |association_with_transcript=84bp_to_ENST00000513040_5end | ||
|cluster_id=chr5:125695908..125695916,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_38_at_GRAMD3_5end | |description=CAGE_peak_38_at_GRAMD3_5end | ||
|id=chr5:125695908..125695916,+ | |id=chr5:125695908..125695916,+ | ||
|ontology_enrichment_celltype=CL:0000453!3.98e-21!5;CL:0000990!8.27e-12!8;CL:0000451!1.11e-09!10;CL:0002541!1.73e-09!3;CL:0000864!5.58e-08!1;CL:0000091!5.58e-08!1 | |ontology_enrichment_celltype=CL:0000453!3.98e-21!5;CL:0000990!8.27e-12!8;CL:0000451!1.11e-09!10;CL:0002541!1.73e-09!3;CL:0000864!5.58e-08!1;CL:0000091!5.58e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.51e-53;5!CL:0001014;3.61e-34;2!CL:0001016;3.61e-34;2!CL:0000990;2.87e-30;8!CL:0000451;5.16e-25;10!CL:0000840;2.19e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.87e-53,5;CL:0001014,3.61e-34,2;CL:0001016,3.61e-34,2;CL:0000990,3.09e-30,8;CL:0000451,5.49e-25,10;CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!5.58e-08!1;DOID:3371!7.76e-08!1;DOID:4549!7.76e-08!1;DOID:5861!7.76e-08!1;DOID:6496!7.76e-08!1;DOID:5662!1.48e-07!1 | |ontology_enrichment_disease=DOID:3571!5.58e-08!1;DOID:3371!7.76e-08!1;DOID:4549!7.76e-08!1;DOID:5861!7.76e-08!1;DOID:6496!7.76e-08!1;DOID:5662!1.48e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.73e-09!3;UBERON:0000920!1.73e-09!3;UBERON:0003124!7.28e-09!7;UBERON:0001282!6.80e-08!1;UBERON:0009842!6.80e-08!1;UBERON:0003704!6.80e-08!1;UBERON:0001171!6.80e-08!1;UBERON:0001172!6.80e-08!1;UBERON:0001280!1.64e-07!4;UBERON:0004647!1.64e-07!4;UBERON:0001882!1.91e-07!1;UBERON:0005403!1.91e-07!1 | |ontology_enrichment_uberon=UBERON:0000476!1.73e-09!3;UBERON:0000920!1.73e-09!3;UBERON:0003124!7.28e-09!7;UBERON:0001282!6.80e-08!1;UBERON:0009842!6.80e-08!1;UBERON:0003704!6.80e-08!1;UBERON:0001171!6.80e-08!1;UBERON:0001172!6.80e-08!1;UBERON:0001280!1.64e-07!4;UBERON:0004647!1.64e-07!4;UBERON:0001882!1.91e-07!1;UBERON:0005403!1.91e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0.108647371922008,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,4.94942561413301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,1.46151324344699,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0.108647371922008,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,4.94942561413301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,1.46151324344699,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p38@GRAMD3 | |short_description=p38@GRAMD3 | ||
}} | }} |
Latest revision as of 01:03, 20 September 2015
Short description: | p38@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_GRAMD3_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 84bp_to_ENST00000513040_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.87e-53 | 5 |
CD1a-positive Langerhans cell | 3.61e-34 | 2 |
immature CD1a-positive Langerhans cell | 3.61e-34 | 2 |
conventional dendritic cell | 3.09e-30 | 8 |
dendritic cell | 5.49e-25 | 10 |
immature conventional dendritic cell | 2.19e-12 | 5 |
common dendritic progenitor | 2.19e-12 | 5 |