FFCP PHASE1:Hg19::chr12:6715564..6715580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1108 | |EntrezGene=1108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1919 | |HGNC=1919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc001qpn.2_5end | |association_with_transcript=36bp_to_uc001qpn.2_5end | ||
|cluster_id=chr12:6715564..6715580,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_13_at_CHD4_5end | |description=CAGE_peak_13_at_CHD4_5end | ||
|id=chr12:6715564..6715580,- | |id=chr12:6715564..6715580,- | ||
|ontology_enrichment_celltype=CL:0002620!9.17e-09!23;CL:0000057!2.94e-07!75;CL:0000055!3.68e-07!180 | |ontology_enrichment_celltype=CL:0002620!9.17e-09!23;CL:0000057!2.94e-07!75;CL:0000055!3.68e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.77e-15;3!CL:0000094;1.59e-09;8!CL:0002620;1.10e-08;23!CL:0000081;6.21e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.31e-15,3;CL:0000094,1.16e-09,8;CL:0002620,5.29e-09,23;CL:0002320,9.75e-08,361;CL:0000219,2.27e-07,386;CL:0000134,2.53e-07,354;CL:0000081,4.97e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-08,371 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0.305653622991805,0.328402357799783,0.393553906568396,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0.232401601740905,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,1.09162460023138,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0.869409257205157,0,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0,0.534880391567015,1.01377082717959,0,0,0.511450247374121,0,0,0.289693037921647,2.3858578411533,0.486634870302636,0.472674085820339,0.886917589850256,0.790513071238134,0.130979075497713,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0.633152558322899,0.264818361626438,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.980771418680752,0.908144565869588,1.15235184896,0,0.312160076830321,0.570471821544449,0.149448680551801,0.704606991862589,0.161872944368132,0.421352420106746,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,0.751190294532984,0.340296549480063,1.61450672119976,0.213557388818567,0.423863802319124,1.20036438433761,0.412210116953756,1.28820270022815,0.744467425326359,2.02531598689519,1.65642908774038,1.7670364197088,0.276149695926898,0.646584227275248,1.77504796258307,0.705264687593482,0.67824236924195,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0,0.435758888184812,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,1.0404181360211,0,0,0.425325291727159,0,0,0,31.0377839874444,1.40877494421162,0.829312462163088,0.576479813667846,0.50496973370552,0.126995788584338,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0,0.672786506072164,2.1798003441664,0.4400297149257,0.258543431515556,0,0.845302752556,1.06375246633948,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0.542621605391443,1.64648067356154,0.325736184293735,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.434343920002738,0.205476322550383,0,0,0.591092280605782,1.50939302401662,0.256686072559497,0.508189248444927,0,0.773288812777695,0,0,1.49801404789436,8.97484377612075,2.48649308061621,0.24538298343828,0,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,0,1.17480694477644,0.686286847621712,0,0.431428401637234,0.106727557803444,0,0,0,0,0.460385919864187,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0.771048469013278,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0.206082023295445,0.640986253728404,0.165018999841176,0,0,0,0.096670718292122,0.924291702687866,0.614014698904518,0.413509717453592,0.322260734604821,1.16013355131383,0.511359764496605,1.24644849905432,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0,0.572499546967965,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.213648142254946,0,0.490080431962063,0,1.73123055571734,0.497992903438899,0,0.399158742865633,0,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0.166849141711909,0.19538809540204,2.50565556505718,0,0,0.99921590399346,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0.2762839155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| ||
|short_description=p13@CHD4 | |short_description=p13@CHD4 | ||
}} | }} |
Latest revision as of 00:48, 20 September 2015
Short description: | p13@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CHD4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 36bp_to_uc001qpn.2_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.31e-15 | 3 |
granulocyte | 1.16e-09 | 8 |
skin fibroblast | 5.29e-09 | 23 |
connective tissue cell | 9.75e-08 | 361 |
motile cell | 2.27e-07 | 386 |
mesenchymal cell | 2.53e-07 | 354 |
blood cell | 4.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.97e-08 | 371 |