FFCP PHASE1:Hg19::chrX:152990454..152990476,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:152990454..152990476,+
|short_description=p4@ABCD1
|description=CAGE_peak_4_at_ABCD1_5end
|association_with_transcript=131bp_to_ENST00000218104,NM_000033,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=215 | |EntrezGene=215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=61 | |HGNC=61 | ||
|TSSclassifier=strong | |||
|UniProt=P33897 | |UniProt=P33897 | ||
|association_with_transcript=131bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | |||
|cluster_id=chrX:152990454..152990476,+ | |||
|description=CAGE_peak_4_at_ABCD1_5end | |||
|id=chrX:152990454..152990476,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.72e-33!65;CL:0000557!1.61e-32!71;CL:0002194!9.24e-32!63;CL:0000576!9.24e-32!63;CL:0000040!9.24e-32!63;CL:0000559!9.24e-32!63;CL:0000839!2.77e-30!70;CL:0000860!4.92e-28!45;CL:0000766!1.17e-27!76;CL:0000763!1.13e-25!112;CL:0000049!1.13e-25!112;CL:0002057!1.65e-25!42;CL:0002031!3.12e-15!124;CL:0002032!3.19e-15!165;CL:0000837!3.19e-15!165;CL:0000037!5.66e-15!172;CL:0000566!5.66e-15!172;CL:0000738!1.16e-14!140;CL:0002087!1.40e-14!119;CL:0000988!1.68e-13!182;CL:0000235!8.27e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.58e-18;6!CL:0000473;3.43e-14;39!CL:0000234;3.43e-14;39!CL:0000840;1.84e-10;5!CL:0000182;8.77e-09;12!CL:0000860;1.55e-07;33!CL:0002057;1.55e-07;33!CL:0000990;4.01e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.28e-18,59;CL:0000576,2.28e-18,59;CL:0000040,2.28e-18,59;CL:0000559,2.28e-18,59;CL:0000235,5.36e-18,6;CL:0002009,1.10e-17,61;CL:0000839,3.68e-16,66;CL:0000557,6.98e-16,67;CL:0000766,1.32e-14,72;CL:0000473,3.30e-14,48;CL:0000234,3.30e-14,48;CL:0000763,5.13e-12,108;CL:0000049,5.13e-12,108;CL:0000840,1.31e-10,5;CL:0001029,1.31e-10,5;CL:0000182,6.37e-09,12;CL:0002087,3.45e-08,115;CL:0002031,9.69e-08,120;CL:0000990,3.22e-07,8;CL:0002032,4.67e-07,161;CL:0000837,4.67e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.08e-09;11!UBERON:0009497;3.22e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.70e-08;1!DOID:10165;2.70e-08;1!DOID:1798;2.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.70e-08,1;DOID:10165,2.70e-08,1;DOID:1798,2.70e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-26!80;UBERON:0001474!4.24e-25!86;UBERON:0002405!2.47e-24!115;UBERON:0004765!2.39e-21!101;UBERON:0001434!2.39e-21!101;UBERON:0002390!8.12e-21!102;UBERON:0003061!8.12e-21!102;UBERON:0002193!1.40e-18!112;UBERON:0002204!6.26e-10!167;UBERON:0001737!6.89e-09!9;UBERON:0001557!8.28e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.24e-08;19!UBERON:0006925;2.24e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-13,76;UBERON:0001474,1.62e-12,82;UBERON:0004765,3.55e-11,90;UBERON:0002405,9.84e-11,93;UBERON:0002390,4.70e-10,98;UBERON:0003061,4.70e-10,98;UBERON:0001434,8.40e-10,100;UBERON:0002193,6.94e-09,108;UBERON:0002107,1.72e-08,19;UBERON:0006925,1.72e-08,19;UBERON:0008836,1.72e-08,19;UBERON:0008835,2.68e-07,22;UBERON:0003894,2.68e-07,22;UBERON:0009854,5.70e-07,23 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0.290796477559129,1.51150377475524,0.970336244751265,0.697287110717054,0.822335776043652,0.619412741790207,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0,0,1.88242339542605,1.09162460023138,1.12361742222542,0.306083892370903,0.320929027076094,1.27867425159808,1.31940520074686,1.19678194572979,0.426224750532694,0.580418477257168,0,0.622822248995575,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0.422510572623884,0,0.628975936525128,0.112328631146495,0,0.32145117339416,0.570025487482497,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,1.17881167947941,0,0,1.9472843619281,2.43781632218974,2.79211717089617,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0.674338760312407,0.482022059766964,0.772057809126758,0.871517776369625,0.237270619111097,0.134831308160164,0.98110732562673,0.769494313892781,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,4.91408956792399,3.41851673264075,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.190493682876507,1.90994212779139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0.871533458600294,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.557409525377156,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,5.934101654863,0,0,0,0,0.201799707191048,0.851692475380653,0,0.921722292925374,0.447352215784832,0,0.390776190804081,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0.31900115973192,0.457987967009312,0,0,0.31396051279005,0.498635045700469,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0.290268993867255,0.584714536689484,1.06750094169172,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12714592229504,1.97798060114799,1.68508859635462,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.439656701034247,2.65013777824443,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0.856396000634902,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0.163565394255844,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,8.64292091788694,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0.342976018874837,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0.647782773655864,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.463044948647668,0,0,0,0,0.196308467114945,0,0.422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| 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| ||
|short_description=p4@ABCD1 | |||
}} | }} |
Latest revision as of 00:43, 20 September 2015
Short description: | p4@ABCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_ENST00000218104, NM_000033, uc004fif.2_5end |
EntrezGene: | ABCD1 |
HGNC: | 61 |
UniProt: | P33897 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.28e-18 | 59 |
monocyte | 2.28e-18 | 59 |
monoblast | 2.28e-18 | 59 |
promonocyte | 2.28e-18 | 59 |
macrophage | 5.36e-18 | 6 |
macrophage dendritic cell progenitor | 1.10e-17 | 61 |
myeloid lineage restricted progenitor cell | 3.68e-16 | 66 |
granulocyte monocyte progenitor cell | 6.98e-16 | 67 |
myeloid leukocyte | 1.32e-14 | 72 |
defensive cell | 3.30e-14 | 48 |
phagocyte | 3.30e-14 | 48 |
myeloid cell | 5.13e-12 | 108 |
common myeloid progenitor | 5.13e-12 | 108 |
immature conventional dendritic cell | 1.31e-10 | 5 |
common dendritic progenitor | 1.31e-10 | 5 |
hepatocyte | 6.37e-09 | 12 |
nongranular leukocyte | 3.45e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 9.69e-08 | 120 |
conventional dendritic cell | 3.22e-07 | 8 |
hematopoietic oligopotent progenitor cell | 4.67e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.67e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-13 | 76 |
bone element | 1.62e-12 | 82 |
skeletal element | 3.55e-11 | 90 |
immune system | 9.84e-11 | 93 |
hematopoietic system | 4.70e-10 | 98 |
blood island | 4.70e-10 | 98 |
skeletal system | 8.40e-10 | 100 |
hemolymphoid system | 6.94e-09 | 108 |
liver | 1.72e-08 | 19 |
digestive gland | 1.72e-08 | 19 |
liver bud | 1.72e-08 | 19 |
hepatic diverticulum | 2.68e-07 | 22 |
liver primordium | 2.68e-07 | 22 |
digestive tract diverticulum | 5.70e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.70e-08 | 1 |
endocrine pancreas cancer | 2.70e-08 | 1 |
pancreatic endocrine carcinoma | 2.70e-08 | 1 |