FFCP PHASE1:Hg19::chr19:55691593..55691604,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:55691593..55691604,- to FFCP PHASE1:Hg19::chr19:55691593..55691604,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6861 | |EntrezGene=6861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11513 | |HGNC=11513 | ||
|TSSclassifier=strong | |||
|UniProt=O00445,Q4FD32 | |UniProt=O00445,Q4FD32 | ||
|association_with_transcript=115bp_to_ENST00000354308,NM_003180,uc002qjn.1,uc002qjo.1_5end | |||
|cluster_id=chr19:55691593..55691604,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_SYT5_5end | |||
|id=chr19:55691593..55691604,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.98e-11;82!UBERON:0006222;7.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.68e-75!57;UBERON:0005068!2.68e-75!57;UBERON:0006241!2.68e-75!57;UBERON:0007135!2.68e-75!57;UBERON:0002616!1.82e-64!59;UBERON:0001017!2.32e-64!82;UBERON:0005743!7.44e-64!86;UBERON:0000955!2.49e-63!69;UBERON:0006238!2.49e-63!69;UBERON:0002780!2.43e-62!41;UBERON:0001890!2.43e-62!41;UBERON:0006240!2.43e-62!41;UBERON:0003080!1.07e-60!42;UBERON:0000073!7.15e-57!94;UBERON:0001016!7.15e-57!94;UBERON:0001893!8.71e-57!34;UBERON:0002020!1.73e-56!34;UBERON:0003528!1.73e-56!34;UBERON:0001869!4.65e-56!32;UBERON:0002791!6.91e-54!33;UBERON:0003075!3.74e-52!86;UBERON:0007284!3.74e-52!86;UBERON:0002619!4.19e-52!22;UBERON:0002346!2.16e-49!90;UBERON:0001950!1.26e-46!20;UBERON:0000956!1.89e-45!25;UBERON:0000203!1.89e-45!25;UBERON:0003056!2.60e-42!61;UBERON:0007023!1.93e-38!115;UBERON:0000033!3.01e-35!123;UBERON:0000153!3.86e-33!129;UBERON:0007811!3.86e-33!129;UBERON:0004121!3.96e-27!169;UBERON:0000924!2.95e-26!173;UBERON:0006601!2.95e-26!173;UBERON:0000025!5.68e-21!194;UBERON:0001871!4.36e-19!7;UBERON:0001872!1.58e-16!5;UBERON:0000349!3.18e-16!5;UBERON:0003076!2.54e-15!15;UBERON:0003057!2.54e-15!15;UBERON:0004111!8.35e-15!241;UBERON:0002298!2.35e-13!8;UBERON:0000200!3.80e-13!6;UBERON:0002420!7.07e-13!9;UBERON:0007245!7.07e-13!9;UBERON:0010009!7.07e-13!9;UBERON:0010011!7.07e-13!9;UBERON:0000454!7.07e-13!9;UBERON:0002308!1.87e-12!9;UBERON:0000125!1.87e-12!9;UBERON:0004733!1.07e-11!12;UBERON:0002028!1.07e-11!12;UBERON:0007277!1.07e-11!12;UBERON:0000477!1.18e-11!286;UBERON:0000064!2.02e-11!219;UBERON:0002021!5.28e-11!5;UBERON:0004732!1.02e-10!13;UBERON:0000483!1.09e-10!309;UBERON:0000119!1.74e-10!312;UBERON:0000475!4.32e-10!365;UBERON:0000988!4.38e-10!3;UBERON:0002771!1.01e-09!3;UBERON:0001896!1.18e-09!3;UBERON:0005290!1.18e-09!3;UBERON:0010096!1.18e-09!3;UBERON:0000481!6.82e-09!347;UBERON:0000369!2.42e-08!4;UBERON:0002435!2.42e-08!4;UBERON:0000204!2.42e-08!4;UBERON:0010082!2.42e-08!4;UBERON:0009663!7.39e-08!7;UBERON:0001876!1.24e-07!2;UBERON:0000062!1.80e-07!511;UBERON:0000007!2.09e-07!2;UBERON:0001894!2.18e-07!7;UBERON:0006222!2.18e-07!7;UBERON:0001954!4.06e-07!2;UBERON:0003022!4.06e-07!2;UBERON:0002421!4.06e-07!2;UBERON:0002600!4.06e-07!2;UBERON:0002148!5.54e-07!2;UBERON:0009662!5.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.35e-57;20!UBERON:0001869;5.89e-56;32!UBERON:0001893;5.54e-53;34!UBERON:0002619;1.97e-52;22!UBERON:0002791;1.97e-51;32!UBERON:0003528;2.41e-46;34!UBERON:0002020;2.41e-46;34!UBERON:0000956;3.59e-46;25!UBERON:0000203;3.59e-46;25!UBERON:0002780;1.75e-38;41!UBERON:0001890;1.75e-38;41!UBERON:0000073;1.91e-28;53!UBERON:0002616;1.91e-28;53!UBERON:0000955;1.23e-26;68!UBERON:0001017;5.18e-23;75!UBERON:0000369;3.53e-20;4!UBERON:0002435;3.53e-20;4!UBERON:0000204;3.53e-20;4!UBERON:0001871;4.27e-20;6!UBERON:0001016;4.84e-17;83!UBERON:0002021;1.15e-16;5!UBERON:0001872;2.95e-16;5!UBERON:0002420;1.29e-15;9!UBERON:0007245;1.29e-15;9!UBERON:0010009;1.29e-15;9!UBERON:0010011;1.29e-15;9!UBERON:0000454;1.29e-15;9!UBERON:0000200;2.45e-13;6!UBERON:0005383;1.63e-12;3!UBERON:0005382;1.63e-12;3!UBERON:0009663;8.76e-12;7!UBERON:0002902;3.55e-10;1!UBERON:0001882;3.55e-10;1!UBERON:0002022;3.55e-10;1!UBERON:0001874;3.55e-10;1!UBERON:0009899;3.55e-10;1!UBERON:0005403;3.55e-10;1!UBERON:0002581;7.54e-10;1!UBERON:0003112;7.54e-10;1!UBERON:0011158;7.54e-10;1!UBERON:0007190;7.54e-10;1!UBERON:0003128;7.54e-10;1!UBERON:0001703;7.54e-10;1!UBERON:0002241;7.54e-10;1!UBERON:0000125;2.79e-09;9!UBERON:0002308;2.79e-09;9!UBERON:0011216;1.89e-08;132!UBERON:0007023;4.53e-08;114!UBERON:0000349;7.37e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.46e-64,32;UBERON:0001893,9.93e-61,34;UBERON:0001950,1.11e-57,20;UBERON:0002780,1.08e-56,41;UBERON:0001890,1.08e-56,41;UBERON:0003080,1.08e-56,41;UBERON:0006240,1.08e-56,41;UBERON:0002791,1.16e-56,32;UBERON:0003528,2.73e-53,34;UBERON:0002020,2.73e-53,34;UBERON:0002619,1.65e-52,22;UBERON:0001049,1.16e-51,56;UBERON:0005068,1.16e-51,56;UBERON:0006241,1.16e-51,56;UBERON:0007135,1.16e-51,56;UBERON:0000073,5.80e-49,53;UBERON:0002616,5.80e-49,53;UBERON:0000955,1.62e-46,68;UBERON:0006238,1.62e-46,68;UBERON:0000956,3.06e-46,25;UBERON:0000203,3.06e-46,25;UBERON:0001017,6.42e-43,81;UBERON:0001016,2.02e-38,89;UBERON:0003056,1.54e-37,61;UBERON:0003075,1.45e-34,82;UBERON:0007284,1.45e-34,82;UBERON:0002346,7.72e-33,86;UBERON:0010371,1.07e-26,104;UBERON:0010314,7.77e-23,132;UBERON:0007023,1.86e-21,114;UBERON:0001871,3.60e-20,6;UBERON:0000369,4.31e-20,4;UBERON:0002435,4.31e-20,4;UBERON:0000204,4.31e-20,4;UBERON:0010082,4.31e-20,4;UBERON:0004121,8.11e-19,171;UBERON:0000924,8.11e-19,171;UBERON:0006601,8.11e-19,171;UBERON:0011216,5.58e-17,223;UBERON:0002021,1.12e-16,5;UBERON:0001872,3.03e-16,5;UBERON:0002420,1.20e-15,9;UBERON:0007245,1.20e-15,9;UBERON:0010009,1.20e-15,9;UBERON:0010011,1.20e-15,9;UBERON:0000454,1.20e-15,9;UBERON:0000200,1.98e-13,6;UBERON:0000025,4.15e-13,192;UBERON:0005383,2.00e-12,3;UBERON:0005382,2.00e-12,3;UBERON:0009663,9.79e-12,7;UBERON:0002902,3.10e-10,1;UBERON:0009899,3.10e-10,1;UBERON:0001882,3.40e-10,1;UBERON:0005403,3.40e-10,1;UBERON:0002022,3.71e-10,1;UBERON:0001874,4.06e-10,1;UBERON:0002581,5.79e-10,1;UBERON:0007190,6.33e-10,1;UBERON:0004111,7.37e-10,240;UBERON:0003112,1.17e-09,1;UBERON:0011158,1.17e-09,1;UBERON:0003128,1.17e-09,1;UBERON:0001703,1.17e-09,1;UBERON:0002241,1.17e-09,1;UBERON:0004761,1.17e-09,1;UBERON:0009617,1.17e-09,1;UBERON:0000125,3.04e-09,9;UBERON:0002308,3.04e-09,9;UBERON:0000349,6.10e-08,5;UBERON:0000483,4.91e-07,306;UBERON:0000119,6.18e-07,309 | |||
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| ||
|short_description=p7@SYT5 | |||
}} | }} |
Latest revision as of 00:42, 20 September 2015
Short description: | p7@SYT5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SYT5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 115bp_to_ENST00000354308, NM_003180, uc002qjn.1, uc002qjo.1_5end |
EntrezGene: | SYT5 |
HGNC: | 11513 |
UniProt: | O00445Q4FD32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data