FFCP PHASE1:Hg19::chr12:6665178..6665191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |EntrezGene=25900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |HGNC=24970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_uc001qpe.1_5end | |association_with_transcript=37bp_to_uc001qpe.1_5end | ||
|cluster_id=chr12:6665178..6665191,- | |||
|description=CAGE_peak_3_at_IFFO1_5end | |description=CAGE_peak_3_at_IFFO1_5end | ||
|id=chr12:6665178..6665191,- | |id=chr12:6665178..6665191,- | ||
|ontology_enrichment_celltype=CL:0000048!2.92e-12!430;CL:0000055!5.42e-12!180;CL:0000723!5.84e-11!436;CL:0000219!2.18e-10!390;CL:0000034!3.83e-10!444;CL:0002009!5.03e-10!65;CL:0002194!7.10e-10!63;CL:0000576!7.10e-10!63;CL:0000040!7.10e-10!63;CL:0000559!7.10e-10!63;CL:0002320!1.11e-09!365;CL:0000557!1.35e-09!71;CL:0000057!1.39e-09!75;CL:0000134!3.42e-09!358;CL:0000839!2.54e-08!70;CL:0002057!7.09e-08!42;CL:0000766!1.98e-07!76 | |ontology_enrichment_celltype=CL:0000048!2.92e-12!430;CL:0000055!5.42e-12!180;CL:0000723!5.84e-11!436;CL:0000219!2.18e-10!390;CL:0000034!3.83e-10!444;CL:0002009!5.03e-10!65;CL:0002194!7.10e-10!63;CL:0000576!7.10e-10!63;CL:0000040!7.10e-10!63;CL:0000559!7.10e-10!63;CL:0002320!1.11e-09!365;CL:0000557!1.35e-09!71;CL:0000057!1.39e-09!75;CL:0000134!3.42e-09!358;CL:0000839!2.54e-08!70;CL:0002057!7.09e-08!42;CL:0000766!1.98e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.36e-07;39!CL:0000234;6.36e-07;39 | |ontology_enrichment_celltype_v019=CL:0000473;6.36e-07;39!CL:0000234;6.36e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.75e-09,61;CL:0002194,5.21e-09,59;CL:0000576,5.21e-09,59;CL:0000040,5.21e-09,59;CL:0000559,5.21e-09,59;CL:0000557,4.24e-08,67;CL:0000048,1.88e-07,427;CL:0000473,2.11e-07,48;CL:0000234,2.11e-07,48;CL:0000839,5.33e-07,66;CL:0000723,6.99e-07,433 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.06e-15!167;UBERON:0001474!1.07e-10!86;UBERON:0002371!1.18e-10!80;UBERON:0004765!2.96e-10!101;UBERON:0001434!2.96e-10!101;UBERON:0002384!4.39e-10!375;UBERON:0002020!1.47e-07!34;UBERON:0003528!1.47e-07!34;UBERON:0002390!1.51e-07!102;UBERON:0003061!1.51e-07!102;UBERON:0001893!2.26e-07!34;UBERON:0000073!2.82e-07!94;UBERON:0001016!2.82e-07!94;UBERON:0003081!3.00e-07!216;UBERON:0001049!4.59e-07!57;UBERON:0005068!4.59e-07!57;UBERON:0006241!4.59e-07!57;UBERON:0007135!4.59e-07!57;UBERON:0002791!5.62e-07!33;UBERON:0001869!5.78e-07!32;UBERON:0002405!8.94e-07!115;UBERON:0001017!9.16e-07!82 | |ontology_enrichment_uberon=UBERON:0002204!9.06e-15!167;UBERON:0001474!1.07e-10!86;UBERON:0002371!1.18e-10!80;UBERON:0004765!2.96e-10!101;UBERON:0001434!2.96e-10!101;UBERON:0002384!4.39e-10!375;UBERON:0002020!1.47e-07!34;UBERON:0003528!1.47e-07!34;UBERON:0002390!1.51e-07!102;UBERON:0003061!1.51e-07!102;UBERON:0001893!2.26e-07!34;UBERON:0000073!2.82e-07!94;UBERON:0001016!2.82e-07!94;UBERON:0003081!3.00e-07!216;UBERON:0001049!4.59e-07!57;UBERON:0005068!4.59e-07!57;UBERON:0006241!4.59e-07!57;UBERON:0007135!4.59e-07!57;UBERON:0002791!5.62e-07!33;UBERON:0001869!5.78e-07!32;UBERON:0002405!8.94e-07!115;UBERON:0001017!9.16e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.54e-13,167;UBERON:0001474,3.39e-10,82;UBERON:0002371,7.62e-10,76;UBERON:0000926,5.30e-09,315;UBERON:0004120,5.30e-09,315;UBERON:0006603,5.30e-09,315;UBERON:0001434,8.51e-09,100;UBERON:0004765,1.48e-08,90 | |||
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|phase1_expression=0.54503513781167,1.07050261945492,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0,1.39560233594486,0.218441372130172,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.492484232307152,0.816002764977012,0.313454721478088,0.286235987131057,1.36874425072884,0.502170558379211,0.229240217243854,0.164201178899891,0,1.18009283054671,0.383829398097213,1.39334510984468,0,0,0,0.542270404062111,0.142169232487422,1.17440175733939,1.10799081706375,1.40381113229099,0.868043482863407,2.23915474239924,1.6194683300949,4.63636021741536,6.54292074508041,2.64513160582167,5.09426528494414,2.55671940596253,1.6446715520873,0.929119112685311,1.7261543539329,1.5369642391746,0.709446689665756,0.344745680736619,1.29096936716765,1.35426486594342,3.57660445130949,1.91034305040492,2.02251136000576,0.918251677112708,0.962787081228281,1.91801137739712,3.29851300186716,1.79517291859469,2.13112375266347,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,1.81619850790011,0.368277635987565,0.316462387440884,1.26753171787165,0.637812899895131,0.838634582033504,1.57260083605093,1.95229960693958,1.44653028027372,0.570025487482497,0.99458338599545,0.91332076882317,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0.411202997999018,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.493313713811028,1.10540007114339,0,0.296573126324121,0.535081656179426,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0,0.511946444617674,1.24930726552346,0,1.64225599384209,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0.511450247374121,2.89151321907653,0,1.30361867064741,0,0,0.283604451492204,0.221729397462564,0.527008714158756,0.654895377488563,0,0,2.59637914923747,2.96020553408754,3.0580330919339,0,0,0,0,0,0.694281003215189,1.13061588384802,0.838998872419812,1.10047216776027,0.626984899610432,0.775250277507987,0,0,0.805658634218294,0,1.22031028774085,0.367663080345869,0,0.446498641420399,0,0.450445921933289,0,0,0.916008719652036,0,0,0,3.97577561356255,0.886413581652058,5.03154887090231,5.44989579422746,1.41867352879343,0.560677600142307,1.06748995729705,0.74000264525148,0.311211035399766,1.21239604862719,0.817309515567294,0.756787138224657,0,0,2.80944069147288,1.71141546463335,1.79338416662161,1.52664848236894,0.971237666208789,0.98315564691574,1.42907919878425,0.859840221182376,3.71972812232756,1.18800285728205,0.494533858557114,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0.438977620880838,1.83892677479412,0.901428353439581,0.567160915800105,4.48474089222155,0.427114777637135,0.423863802319124,5.10154863343484,1.44273540933814,6.44101350114073,1.67505170698431,4.72573730275545,0.584622030967192,3.78650661366172,0.644349290496095,0.80823028409406,6.03516307278244,1.71278566986988,1.18692414617341,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.518305275076852,0.252320850875628,0.72995471815166,0,1.28648187638577,2.76269842704961,0.928735856063958,8.66255378003503,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0.882926198829301,0,0.514703430895577,0,0,0,0.0925884451585296,0,3.11980435583874,0,0,0.587043471179108,0.577465791044295,0.462985512576611,0.190254152234598,0,0,3.20082107913617,1.8720341211139,3.26988557035202,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.207328115540772,0.288239906833923,0.50496973370552,0.507983154337352,1.14596527667483,1.17217447210047,0,2.05654985406647,4.50514586765876,2.00078502841405,0.784917590417525,0.43596006883328,0.95339771567235,1.16344544182,0,1.690605505112,1.06375246633948,5.2003718455683,0.514414748524284,0,1.3321108950805,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,1.2162378064119,2.51128545716063,2.10833939483032,1.19812427745791,0,8.5582143024431,3.04040744001916,3.08214483825575,2.68591444859843,0.784596007954691,0.394061520403854,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0.837581326671744,1.27587750330633,0,0,0.414415513436035,0.36807447515742,0.500170521059677,1.08506009479894,1.45579603071565,1.60586089917446,0.788512075169673,0.702848489956279,0.300946099727719,0,1.03473071292505,0.664225598535437,1.10621501125022,1.65078867489357,1.17480694477644,5.14715135716284,0.206768026122887,0.647142602455851,0.74709290462411,0.303127571446259,0,0.907170879989041,0.992431231275107,2.455391572609,1.40330047216537,0.896974044789907,1.53512174720011,0.804269605718038,7.42090332224955,1.54209693802656,0.887808626565635,1.47828880824856,3.11552657510173,3.1376802184189,0,0,0,0.803701137152247,1.45672934405374,1.70461739447251,0,0.231046011313244,0,1.46139224653261,0.316654886678627,1.13733384070897,1.19065593693561,1.29549549661284,3.08454505380579,0.541892875087706,1.50506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| ||
|short_description=p3@IFFO1 | |short_description=p3@IFFO1 | ||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p3@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFFO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_uc001qpe.1_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.75e-09 | 61 |
monopoietic cell | 5.21e-09 | 59 |
monocyte | 5.21e-09 | 59 |
monoblast | 5.21e-09 | 59 |
promonocyte | 5.21e-09 | 59 |
granulocyte monocyte progenitor cell | 4.24e-08 | 67 |
multi fate stem cell | 1.88e-07 | 427 |
defensive cell | 2.11e-07 | 48 |
phagocyte | 2.11e-07 | 48 |
myeloid lineage restricted progenitor cell | 5.33e-07 | 66 |
somatic stem cell | 6.99e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.54e-13 | 167 |
bone element | 3.39e-10 | 82 |
bone marrow | 7.62e-10 | 76 |
mesoderm | 5.30e-09 | 315 |
mesoderm-derived structure | 5.30e-09 | 315 |
presumptive mesoderm | 5.30e-09 | 315 |
skeletal system | 8.51e-09 | 100 |
skeletal element | 1.48e-08 | 90 |