FFCP PHASE1:Hg19::chr18:56338201..56338239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10892 | |EntrezGene=10892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6819 | |HGNC=6819 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UDY8 | |UniProt=Q9UDY8 | ||
|association_with_transcript=-378bp_to_ENST00000348428,NM_006785,NM_173844,uc002lhm.1,uc002lhn.1_5end | |association_with_transcript=-378bp_to_ENST00000348428,NM_006785,NM_173844,uc002lhm.1,uc002lhn.1_5end | ||
|cluster_id=chr18:56338201..56338239,+ | |||
|coexpression_cluster_id=C537 | |coexpression_cluster_id=C537 | ||
|description=CAGE_peak_8_at_MALT1_5end | |description=CAGE_peak_8_at_MALT1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!5.75e-74!42;CL:0000860!2.92e-68!45;CL:0002009!2.92e-48!65;CL:0002194!4.14e-47!63;CL:0000576!4.14e-47!63;CL:0000040!4.14e-47!63;CL:0000559!4.14e-47!63;CL:0000766!1.01e-46!76;CL:0000557!3.02e-43!71;CL:0000839!2.55e-41!70;CL:0000763!5.04e-39!112;CL:0000049!5.04e-39!112;CL:0000738!1.58e-34!140;CL:0002087!2.95e-28!119;CL:0000037!4.70e-28!172;CL:0000566!4.70e-28!172;CL:0002032!4.41e-27!165;CL:0000837!4.41e-27!165;CL:0000988!1.04e-25!182;CL:0002031!2.84e-25!124;CL:0002393!3.05e-12!9;CL:0002397!3.05e-12!9;CL:0000453!3.27e-09!5;CL:0000134!2.60e-08!358;CL:0000767!5.92e-08!3;CL:0002320!6.81e-08!365;CL:0000219!7.04e-08!390;CL:0000990!3.78e-07!8 | |ontology_enrichment_celltype=CL:0002057!5.75e-74!42;CL:0000860!2.92e-68!45;CL:0002009!2.92e-48!65;CL:0002194!4.14e-47!63;CL:0000576!4.14e-47!63;CL:0000040!4.14e-47!63;CL:0000559!4.14e-47!63;CL:0000766!1.01e-46!76;CL:0000557!3.02e-43!71;CL:0000839!2.55e-41!70;CL:0000763!5.04e-39!112;CL:0000049!5.04e-39!112;CL:0000738!1.58e-34!140;CL:0002087!2.95e-28!119;CL:0000037!4.70e-28!172;CL:0000566!4.70e-28!172;CL:0002032!4.41e-27!165;CL:0000837!4.41e-27!165;CL:0000988!1.04e-25!182;CL:0002031!2.84e-25!124;CL:0002393!3.05e-12!9;CL:0002397!3.05e-12!9;CL:0000453!3.27e-09!5;CL:0000134!2.60e-08!358;CL:0000767!5.92e-08!3;CL:0002320!6.81e-08!365;CL:0000219!7.04e-08!390;CL:0000990!3.78e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-80;33!CL:0002057;4.04e-80;33!CL:0000473;2.10e-58;39!CL:0000234;2.10e-58;39!CL:0000576;5.91e-39;48!CL:0000453;4.14e-29;5!CL:0000766;9.01e-23;69!CL:0000990;2.71e-16;8!CL:0000451;2.28e-13;10!CL:0000763;1.64e-11;100!CL:0002087;8.31e-10;104!CL:0000738;2.40e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;4.04e-80;33!CL:0002057;4.04e-80;33!CL:0000473;2.10e-58;39!CL:0000234;2.10e-58;39!CL:0000576;5.91e-39;48!CL:0000453;4.14e-29;5!CL:0000766;9.01e-23;69!CL:0000990;2.71e-16;8!CL:0000451;2.28e-13;10!CL:0000763;1.64e-11;100!CL:0002087;8.31e-10;104!CL:0000738;2.40e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.85e-71,42;CL:0002057,8.85e-71,42;CL:0000473,1.40e-61,48;CL:0000234,1.40e-61,48;CL:0002009,1.66e-52,61;CL:0002194,1.08e-48,59;CL:0000576,1.08e-48,59;CL:0000040,1.08e-48,59;CL:0000559,1.08e-48,59;CL:0000557,1.30e-47,67;CL:0000839,2.65e-43,66;CL:0000766,1.67e-39,72;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0000738,2.76e-30,136;CL:0000453,4.01e-29,5;CL:0002031,2.01e-25,120;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0002087,9.40e-24,115;CL:0000988,1.45e-22,177;CL:0000990,2.66e-16,8;CL:0000451,2.25e-13,10;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-51;42!CL:0000049;1.03e-14;108 | |ontology_enrichment_development_v019=CL:0002057;1.06e-51;42!CL:0000049;1.03e-14;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.96e-37!80;UBERON:0001474!9.26e-34!86;UBERON:0002390!1.59e-33!102;UBERON:0003061!1.59e-33!102;UBERON:0002193!1.90e-29!112;UBERON:0004765!4.29e-27!101;UBERON:0001434!4.29e-27!101;UBERON:0002405!1.27e-26!115;UBERON:0002204!5.21e-13!167;UBERON:0003081!3.76e-11!216;UBERON:0002384!2.44e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!3.96e-37!80;UBERON:0001474!9.26e-34!86;UBERON:0002390!1.59e-33!102;UBERON:0003061!1.59e-33!102;UBERON:0002193!1.90e-29!112;UBERON:0004765!4.29e-27!101;UBERON:0001434!4.29e-27!101;UBERON:0002405!1.27e-26!115;UBERON:0002204!5.21e-13!167;UBERON:0003081!3.76e-11!216;UBERON:0002384!2.44e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-41,76;UBERON:0001474,1.82e-38,82;UBERON:0004765,8.08e-35,90;UBERON:0002405,1.31e-33,93;UBERON:0002390,9.28e-32,98;UBERON:0003061,9.28e-32,98;UBERON:0001434,4.54e-31,100;UBERON:0002193,1.46e-28,108;UBERON:0002204,2.00e-17,167;UBERON:0003081,8.84e-14,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,1.04e-07,315;UBERON:0004120,1.04e-07,315;UBERON:0006603,1.04e-07,315 | |||
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| ||
|short_description=p8@MALT1 | |short_description=p8@MALT1 | ||
}} | }} |
Latest revision as of 00:32, 20 September 2015
Short description: | p8@MALT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MALT1_5end |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | -378bp_to_ENST00000348428, NM_006785, NM_173844, uc002lhm.1, uc002lhn.1_5end |
EntrezGene: | MALT1 |
HGNC: | 6819 |
UniProt: | Q9UDY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.85e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.85e-71 | 42 |
defensive cell | 1.40e-61 | 48 |
phagocyte | 1.40e-61 | 48 |
macrophage dendritic cell progenitor | 1.66e-52 | 61 |
monopoietic cell | 1.08e-48 | 59 |
monocyte | 1.08e-48 | 59 |
monoblast | 1.08e-48 | 59 |
promonocyte | 1.08e-48 | 59 |
granulocyte monocyte progenitor cell | 1.30e-47 | 67 |
myeloid lineage restricted progenitor cell | 2.65e-43 | 66 |
myeloid leukocyte | 1.67e-39 | 72 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
leukocyte | 2.76e-30 | 136 |
Langerhans cell | 4.01e-29 | 5 |
hematopoietic lineage restricted progenitor cell | 2.01e-25 | 120 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
nongranular leukocyte | 9.40e-24 | 115 |
hematopoietic cell | 1.45e-22 | 177 |
conventional dendritic cell | 2.66e-16 | 8 |
dendritic cell | 2.25e-13 | 10 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-41 | 76 |
bone element | 1.82e-38 | 82 |
skeletal element | 8.08e-35 | 90 |
immune system | 1.31e-33 | 93 |
hematopoietic system | 9.28e-32 | 98 |
blood island | 9.28e-32 | 98 |
skeletal system | 4.54e-31 | 100 |
hemolymphoid system | 1.46e-28 | 108 |
musculoskeletal system | 2.00e-17 | 167 |
lateral plate mesoderm | 8.84e-14 | 203 |
connective tissue | 5.20e-09 | 371 |
mesoderm | 1.04e-07 | 315 |
mesoderm-derived structure | 1.04e-07 | 315 |
presumptive mesoderm | 1.04e-07 | 315 |