FFCP PHASE1:Hg19::chr17:38287151..38287186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339287 | |EntrezGene=339287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27905 | |HGNC=27905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_uc002hud.2_5end | |association_with_transcript=-67bp_to_uc002hud.2_5end | ||
|cluster_id=chr17:38287151..38287186,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_16_at_MSL1_5end | |description=CAGE_peak_16_at_MSL1_5end | ||
|id=chr17:38287151..38287186,+ | |id=chr17:38287151..38287186,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.97e-75!42;CL:0000860!1.09e-69!45;CL:0000766!2.33e-58!76;CL:0002009!8.21e-47!65;CL:0002194!7.60e-46!63;CL:0000576!7.60e-46!63;CL:0000040!7.60e-46!63;CL:0000559!7.60e-46!63;CL:0000557!5.15e-42!71;CL:0000839!2.73e-40!70;CL:0000763!1.53e-39!112;CL:0000049!1.53e-39!112;CL:0000738!2.84e-37!140;CL:0000037!3.40e-29!172;CL:0000566!3.40e-29!172;CL:0002087!2.27e-28!119;CL:0002032!3.27e-28!165;CL:0000837!3.27e-28!165;CL:0000988!7.54e-27!182;CL:0002031!2.37e-25!124;CL:0000094!3.15e-22!8;CL:0000081!1.03e-15!11;CL:0000775!6.90e-10!3;CL:0000767!1.15e-08!3;CL:0000134!7.06e-08!358;CL:0002320!1.70e-07!365;CL:0000771!4.24e-07!2 | |ontology_enrichment_celltype=CL:0002057!1.97e-75!42;CL:0000860!1.09e-69!45;CL:0000766!2.33e-58!76;CL:0002009!8.21e-47!65;CL:0002194!7.60e-46!63;CL:0000576!7.60e-46!63;CL:0000040!7.60e-46!63;CL:0000559!7.60e-46!63;CL:0000557!5.15e-42!71;CL:0000839!2.73e-40!70;CL:0000763!1.53e-39!112;CL:0000049!1.53e-39!112;CL:0000738!2.84e-37!140;CL:0000037!3.40e-29!172;CL:0000566!3.40e-29!172;CL:0002087!2.27e-28!119;CL:0002032!3.27e-28!165;CL:0000837!3.27e-28!165;CL:0000988!7.54e-27!182;CL:0002031!2.37e-25!124;CL:0000094!3.15e-22!8;CL:0000081!1.03e-15!11;CL:0000775!6.90e-10!3;CL:0000767!1.15e-08!3;CL:0000134!7.06e-08!358;CL:0002320!1.70e-07!365;CL:0000771!4.24e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.18e-106;33!CL:0002057;9.18e-106;33!CL:0000473;5.77e-75;39!CL:0000234;5.77e-75;39!CL:0000576;2.65e-49;48!CL:0000094;1.11e-34;8!CL:0000766;3.21e-34;69!CL:0000081;7.24e-25;11!CL:0000763;3.19e-21;100!CL:0000775;6.27e-15;3!CL:0000767;7.50e-13;3!CL:0002087;3.69e-12;104!CL:0000738;1.13e-10;136!CL:0000771;1.84e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.15e-91,42;CL:0002057,3.15e-91,42;CL:0000766,2.80e-82,72;CL:0000473,6.29e-79,48;CL:0000234,6.29e-79,48;CL:0002194,1.05e-61,59;CL:0000576,1.05e-61,59;CL:0000040,1.05e-61,59;CL:0000559,1.05e-61,59;CL:0002009,1.76e-59,61;CL:0000839,1.67e-54,66;CL:0000557,1.35e-53,67;CL:0000763,2.25e-52,108;CL:0000049,2.25e-52,108;CL:0000738,5.72e-40,136;CL:0000094,8.36e-35,8;CL:0002032,1.64e-32,161;CL:0000837,1.64e-32,161;CL:0000037,8.12e-31,168;CL:0000988,7.80e-29,177;CL:0002087,1.95e-28,115;CL:0002031,5.80e-27,120;CL:0000081,5.91e-25,11;CL:0000775,6.27e-15,3;CL:0000767,5.71e-13,3;CL:0000771,1.84e-10,2;CL:0000134,2.95e-10,354;CL:0002320,6.78e-10,361;CL:0000219,1.26e-08,386;CL:0000048,4.47e-07,427;CL:0000723,7.30e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-66;42!CL:0000049;4.88e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.65e-51!102;UBERON:0003061!9.65e-51!102;UBERON:0002193!4.61e-45!112;UBERON:0002371!3.70e-36!80;UBERON:0001474!6.21e-33!86;UBERON:0004765!3.43e-28!101;UBERON:0001434!3.43e-28!101;UBERON:0002405!6.18e-25!115;UBERON:0003081!3.68e-18!216;UBERON:0000178!4.27e-16!15;UBERON:0000179!4.27e-16!15;UBERON:0000463!4.27e-16!15;UBERON:0002204!4.36e-13!167;UBERON:0002384!5.63e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!9.65e-51!102;UBERON:0003061!9.65e-51!102;UBERON:0002193!4.61e-45!112;UBERON:0002371!3.70e-36!80;UBERON:0001474!6.21e-33!86;UBERON:0004765!3.43e-28!101;UBERON:0001434!3.43e-28!101;UBERON:0002405!6.18e-25!115;UBERON:0003081!3.68e-18!216;UBERON:0000178!4.27e-16!15;UBERON:0000179!4.27e-16!15;UBERON:0000463!4.27e-16!15;UBERON:0002204!4.36e-13!167;UBERON:0002384!5.63e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.25e-17;15!UBERON:0000179;3.25e-17;15!UBERON:0000463;3.25e-17;15!UBERON:0002390;4.66e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.54e-58,98;UBERON:0003061,6.54e-58,98;UBERON:0002193,7.72e-52,108;UBERON:0002371,1.73e-46,76;UBERON:0001474,1.32e-42,82;UBERON:0004765,3.16e-38,90;UBERON:0002405,8.90e-37,93;UBERON:0001434,9.95e-34,100;UBERON:0003081,8.24e-24,203;UBERON:0002204,2.03e-17,167;UBERON:0000178,3.55e-17,15;UBERON:0000179,3.55e-17,15;UBERON:0000463,3.55e-17,15;UBERON:0000926,2.16e-12,315;UBERON:0004120,2.16e-12,315;UBERON:0006603,2.16e-12,315;UBERON:0002384,2.11e-09,371 | |||
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| ||
|short_description=p16@MSL1 | |short_description=p16@MSL1 | ||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p16@MSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MSL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -67bp_to_uc002hud.2_5end |
EntrezGene: | MSL1 |
HGNC: | 27905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.15e-91 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.15e-91 | 42 |
myeloid leukocyte | 2.80e-82 | 72 |
defensive cell | 6.29e-79 | 48 |
phagocyte | 6.29e-79 | 48 |
monopoietic cell | 1.05e-61 | 59 |
monocyte | 1.05e-61 | 59 |
monoblast | 1.05e-61 | 59 |
promonocyte | 1.05e-61 | 59 |
macrophage dendritic cell progenitor | 1.76e-59 | 61 |
myeloid lineage restricted progenitor cell | 1.67e-54 | 66 |
granulocyte monocyte progenitor cell | 1.35e-53 | 67 |
myeloid cell | 2.25e-52 | 108 |
common myeloid progenitor | 2.25e-52 | 108 |
leukocyte | 5.72e-40 | 136 |
granulocyte | 8.36e-35 | 8 |
hematopoietic oligopotent progenitor cell | 1.64e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-32 | 161 |
hematopoietic stem cell | 8.12e-31 | 168 |
hematopoietic cell | 7.80e-29 | 177 |
nongranular leukocyte | 1.95e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 5.80e-27 | 120 |
blood cell | 5.91e-25 | 11 |
neutrophil | 6.27e-15 | 3 |
basophil | 5.71e-13 | 3 |
eosinophil | 1.84e-10 | 2 |
mesenchymal cell | 2.95e-10 | 354 |
connective tissue cell | 6.78e-10 | 361 |
motile cell | 1.26e-08 | 386 |
multi fate stem cell | 4.47e-07 | 427 |
somatic stem cell | 7.30e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.54e-58 | 98 |
blood island | 6.54e-58 | 98 |
hemolymphoid system | 7.72e-52 | 108 |
bone marrow | 1.73e-46 | 76 |
bone element | 1.32e-42 | 82 |
skeletal element | 3.16e-38 | 90 |
immune system | 8.90e-37 | 93 |
skeletal system | 9.95e-34 | 100 |
lateral plate mesoderm | 8.24e-24 | 203 |
musculoskeletal system | 2.03e-17 | 167 |
blood | 3.55e-17 | 15 |
haemolymphatic fluid | 3.55e-17 | 15 |
organism substance | 3.55e-17 | 15 |
mesoderm | 2.16e-12 | 315 |
mesoderm-derived structure | 2.16e-12 | 315 |
presumptive mesoderm | 2.16e-12 | 315 |
connective tissue | 2.11e-09 | 371 |