FFCP PHASE1:Hg19::chr17:38278209..38278250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339287 | |EntrezGene=339287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27905 | |HGNC=27905 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DK7 | |UniProt=Q68DK7 | ||
|association_with_transcript=0bp_to_CR749360_5end | |association_with_transcript=0bp_to_CR749360_5end | ||
|cluster_id=chr17:38278209..38278250,+ | |||
|coexpression_cluster_id=C2322 | |||
|description=CAGE_peak_2_at_MSL1_5end | |description=CAGE_peak_2_at_MSL1_5end | ||
|id=chr17:38278209..38278250,+ | |id=chr17:38278209..38278250,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.36e-10!18;CL:0000789!6.36e-10!18;CL:0002420!6.36e-10!18;CL:0002419!6.36e-10!18;CL:0000790!6.36e-10!18;CL:0000738!2.86e-09!140;CL:0000838!1.13e-07!52;CL:0000084!1.59e-07!25;CL:0000827!1.59e-07!25;CL:0000542!1.93e-07!53;CL:0000051!1.93e-07!53;CL:0000625!2.92e-07!11 | |ontology_enrichment_celltype=CL:0000791!6.36e-10!18;CL:0000789!6.36e-10!18;CL:0002420!6.36e-10!18;CL:0002419!6.36e-10!18;CL:0000790!6.36e-10!18;CL:0000738!2.86e-09!140;CL:0000838!1.13e-07!52;CL:0000084!1.59e-07!25;CL:0000827!1.59e-07!25;CL:0000542!1.93e-07!53;CL:0000051!1.93e-07!53;CL:0000625!2.92e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.56e-10;18!CL:0000789;6.56e-10;18!CL:0002419;6.56e-10;18!CL:0000084;1.45e-07;25!CL:0000625;2.61e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-10,136;CL:0000791,6.36e-10,18;CL:0000789,6.36e-10,18;CL:0002420,6.36e-10,18;CL:0002419,6.36e-10,18;CL:0000790,6.36e-10,18;CL:0000838,1.13e-07,52;CL:0000084,1.59e-07,25;CL:0000827,1.59e-07,25;CL:0000542,1.93e-07,53;CL:0000051,1.93e-07,53;CL:0000625,2.92e-07,11;CL:0000037,4.17e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;6.56e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-25!115;UBERON:0001049!6.85e-08!57;UBERON:0005068!6.85e-08!57;UBERON:0006241!6.85e-08!57;UBERON:0007135!6.85e-08!57;UBERON:0000178!7.53e-07!15;UBERON:0000179!7.53e-07!15;UBERON:0000463!7.53e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!8.68e-25!115;UBERON:0001049!6.85e-08!57;UBERON:0005068!6.85e-08!57;UBERON:0006241!6.85e-08!57;UBERON:0007135!6.85e-08!57;UBERON:0000178!7.53e-07!15;UBERON:0000179!7.53e-07!15;UBERON:0000463!7.53e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.38e-07;114!UBERON:0000178;5.55e-07;15!UBERON:0000179;5.55e-07;15!UBERON:0000463;5.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.74e-24,114;UBERON:0001049,7.17e-08,56;UBERON:0005068,7.17e-08,56;UBERON:0006241,7.17e-08,56;UBERON:0007135,7.17e-08,56;UBERON:0000073,1.29e-07,53;UBERON:0002616,1.29e-07,53;UBERON:0000178,7.53e-07,15;UBERON:0000179,7.53e-07,15;UBERON:0000463,7.53e-07,15 | |||
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| ||
|short_description=p2@MSL1 | |short_description=p2@MSL1 | ||
}} | }} |
Latest revision as of 00:11, 20 September 2015
Short description: | p2@MSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSL1_5end |
Coexpression cluster: | C2322_Mast_Neutrophils_Eosinophils_granulocyte_cerebellum_Whole_CD4 |
Association with transcript: | 0bp_to_CR749360_5end |
EntrezGene: | MSL1 |
HGNC: | 27905 |
UniProt: | Q68DK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.92e-10 | 136 |
mature alpha-beta T cell | 6.36e-10 | 18 |
alpha-beta T cell | 6.36e-10 | 18 |
immature T cell | 6.36e-10 | 18 |
mature T cell | 6.36e-10 | 18 |
immature alpha-beta T cell | 6.36e-10 | 18 |
lymphoid lineage restricted progenitor cell | 1.13e-07 | 52 |
T cell | 1.59e-07 | 25 |
pro-T cell | 1.59e-07 | 25 |
lymphocyte | 1.93e-07 | 53 |
common lymphoid progenitor | 1.93e-07 | 53 |
CD8-positive, alpha-beta T cell | 2.92e-07 | 11 |
hematopoietic stem cell | 4.17e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.74e-24 | 114 |
neural tube | 7.17e-08 | 56 |
neural rod | 7.17e-08 | 56 |
future spinal cord | 7.17e-08 | 56 |
neural keel | 7.17e-08 | 56 |
regional part of nervous system | 1.29e-07 | 53 |
regional part of brain | 1.29e-07 | 53 |
blood | 7.53e-07 | 15 |
haemolymphatic fluid | 7.53e-07 | 15 |
organism substance | 7.53e-07 | 15 |