FFCP PHASE1:Hg19::chrX:152774119..152774158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=243bp_to_U11686_5end | |association_with_transcript=243bp_to_U11686_5end | ||
|cluster_id=chrX:152774119..152774158,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_12_at_BGN_5end | |description=CAGE_peak_12_at_BGN_5end | ||
|id=chrX:152774119..152774158,+ | |id=chrX:152774119..152774158,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.02e-20!180;CL:0000057!3.19e-13!75;CL:0000359!1.16e-11!32;CL:0000183!2.49e-11!59;CL:0000187!7.26e-11!54;CL:0000680!4.42e-10!57;CL:0000056!4.42e-10!57;CL:0000355!4.42e-10!57;CL:0000393!5.67e-09!60;CL:0000211!5.67e-09!60;CL:0000192!1.33e-08!42;CL:0000514!1.33e-08!42;CL:0000222!5.03e-08!119;CL:0002334!1.38e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.02e-20!180;CL:0000057!3.19e-13!75;CL:0000359!1.16e-11!32;CL:0000183!2.49e-11!59;CL:0000187!7.26e-11!54;CL:0000680!4.42e-10!57;CL:0000056!4.42e-10!57;CL:0000355!4.42e-10!57;CL:0000393!5.67e-09!60;CL:0000211!5.67e-09!60;CL:0000192!1.33e-08!42;CL:0000514!1.33e-08!42;CL:0000222!5.03e-08!119;CL:0002334!1.38e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.03e-12;32!CL:0000192;2.55e-07;43!CL:0002620;2.63e-07;23!CL:0002334;4.93e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.09e-14,76;CL:0000359,4.52e-13,32;CL:0000192,6.19e-09,43;CL:0000514,6.19e-09,43;CL:0000187,1.57e-08,55;CL:0000680,1.08e-07,58;CL:0000056,1.08e-07,58;CL:0000355,1.08e-07,58;CL:0002620,1.65e-07,23;CL:0002334,5.73e-07,12;CL:0000393,6.00e-07,61;CL:0000211,6.00e-07,61;CL:0000327,9.99e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.55e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.17e-24!84;UBERON:0002049!8.76e-18!79;UBERON:0007798!8.76e-18!79;UBERON:0001981!8.82e-18!60;UBERON:0007500!8.82e-18!60;UBERON:0004537!8.82e-18!60;UBERON:0006965!8.82e-18!60;UBERON:0000055!9.87e-17!69;UBERON:0001009!1.96e-16!113;UBERON:0004535!1.06e-15!110;UBERON:0001637!3.59e-15!42;UBERON:0003509!3.59e-15!42;UBERON:0004572!3.59e-15!42;UBERON:0004573!7.60e-13!33;UBERON:0004571!7.60e-13!33;UBERON:0003914!1.39e-12!118;UBERON:0000477!8.23e-11!286;UBERON:0007100!9.71e-11!27;UBERON:0001134!1.02e-10!61;UBERON:0002036!1.02e-10!61;UBERON:0003082!1.02e-10!61;UBERON:0004111!1.65e-10!241;UBERON:0002385!2.01e-10!63;UBERON:0001015!2.01e-10!63;UBERON:0000383!2.01e-10!63;UBERON:0000948!4.47e-10!24;UBERON:0005498!4.47e-10!24;UBERON:0004140!4.47e-10!24;UBERON:0009881!4.47e-10!24;UBERON:0004141!4.47e-10!24;UBERON:0003084!4.47e-10!24;UBERON:0007005!4.47e-10!24;UBERON:0004139!4.47e-10!24;UBERON:0004291!4.47e-10!24;UBERON:0000025!4.72e-10!194;UBERON:0004290!4.60e-09!70;UBERON:0000914!5.97e-09!83;UBERON:0002329!5.97e-09!83;UBERON:0003077!5.97e-09!83;UBERON:0003059!5.97e-09!83;UBERON:0007282!5.97e-09!83;UBERON:0009618!5.97e-09!83;UBERON:0007285!5.97e-09!83;UBERON:0000947!1.71e-07!21;UBERON:0010191!1.71e-07!21;UBERON:0000475!1.80e-07!365;UBERON:0000119!3.00e-07!312;UBERON:0000486!8.88e-07!82;UBERON:0007023!9.61e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.36e-12;42!UBERON:0003509;9.36e-12;42!UBERON:0004572;9.36e-12;42!UBERON:0004573;1.18e-11;33!UBERON:0004571;1.18e-11;33!UBERON:0000948;1.07e-08;22!UBERON:0007100;4.07e-08;25!UBERON:0000947;1.32e-07;21!UBERON:0010191;1.32e-07;21!UBERON:0002049;2.89e-07;75!UBERON:0007798;2.89e-07;75!UBERON:0000055;4.21e-07;65!UBERON:0004457;5.81e-07;9!UBERON:0000042;5.81e-07;9!UBERON:0007500;6.43e-07;56!UBERON:0001981;6.43e-07;56!UBERON:0004537;6.43e-07;56!UBERON:0003688;9.76e-07;6!UBERON:0002358;9.76e-07;6!UBERON:0003684;9.76e-07;6!UBERON:0001178;9.76e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.84e-22,83;UBERON:0002049,9.15e-17,78;UBERON:0007798,9.15e-17,78;UBERON:0001637,1.56e-16,42;UBERON:0003509,1.56e-16,42;UBERON:0004572,1.56e-16,42;UBERON:0000055,3.12e-16,68;UBERON:0007500,5.15e-16,59;UBERON:0001981,5.15e-16,59;UBERON:0004537,5.15e-16,59;UBERON:0006965,5.15e-16,59;UBERON:0004535,1.01e-15,109;UBERON:0001009,1.28e-15,112;UBERON:0004573,1.42e-13,33;UBERON:0004571,1.42e-13,33;UBERON:0003914,1.44e-12,117;UBERON:0000948,5.10e-10,24;UBERON:0005498,5.10e-10,24;UBERON:0004140,5.10e-10,24;UBERON:0009881,5.10e-10,24;UBERON:0004141,5.10e-10,24;UBERON:0003084,5.10e-10,24;UBERON:0007005,5.10e-10,24;UBERON:0004139,5.10e-10,24;UBERON:0004291,5.10e-10,24;UBERON:0007100,1.96e-09,27;UBERON:0001134,2.54e-08,62;UBERON:0002036,2.54e-08,62;UBERON:0003082,2.54e-08,62;UBERON:0002385,8.34e-08,64;UBERON:0001015,8.34e-08,64;UBERON:0000383,8.34e-08,64;UBERON:0000947,1.25e-07,21;UBERON:0010191,1.25e-07,21;UBERON:0004457,2.34e-07,12;UBERON:0000042,2.34e-07,12;UBERON:0007524,2.83e-07,73;UBERON:0002329,6.08e-07,71;UBERON:0003059,6.08e-07,71;UBERON:0007282,6.08e-07,71;UBERON:0004290,6.08e-07,71;UBERON:0009618,6.08e-07,71;UBERON:0004797,6.86e-07,7;UBERON:0007503,8.23e-07,78;UBERON:0003077,9.79e-07,72;UBERON:0007285,9.79e-07,72 | |||
|phase1_expression=0.726713517082227,1.2846031433459,1.12763523276777,3.00219895059391,2.23480547213644,5.23403114460221,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,2.01697543935533,2.41077811209591,0,1.46379839637152,0,0.816002764977012,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,3.97583067623023,5.51471701699479,6.80778639115871,25.4491503056352,31.1446316993687,0,0,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,1.38856200643038,0.56530794192401,1.25849830862972,0.275118041940067,0,0,0,1.33888245105868,0.805658634218294,0,1.46437234528902,0,3.24056779152704,0.267899184852239,0.898117490504679,0.337834441449967,0,0.949265659568129,1.09921046358244,0,0,0,7.45457927542978,8.61087479319142,0.264818361626438,21.7995831769098,4.965357350777,2.80338800071154,16.0123493594557,5.42668606517752,0,1.88594940897563,0.817309515567294,7.41651395460164,14.404398112,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,0,0.245668634623536,0,1.18800285728205,3.21447008062124,0,0,0,0.375355559615893,0,0,0.30648779579902,0.751190294532984,1.47461838108027,3.22901344239952,2.56268866582281,2.54318281391474,3.00091096084402,1.95799805553034,3.60696756063881,1.8611685633159,1.85653965465393,3.89748020644795,2.52433774244115,2.20919756741518,4.20279747728911,6.03516307278244,1.41052937518696,1.18692414617341,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,3.21620469096443,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0.982827216677626,8.86184860022106,0,0,0.171567810298526,0,0,0.100528972411631,0,0.651616610620649,0,0,0,1.29149563659404,1.58803092537181,2.77791307545966,3.42457474022277,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02753927732474,0.43596006883328,2.2001485746285,1.80980402060889,0,1.690605505112,1.32969058292435,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,1.64648067356154,1.30294473717494,0,0,0,0,0,0,0,0,7.42837052023906,6.89171615004683,1.42636905040718,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,2.08575535922538,1.50051156317903,2.17012018959788,9.15071790735551,12.4900292158013,5.04647728108591,8.43418187947535,6.01892199455438,18.1926003244788,6.2083842775503,1.32845119707087,1.29058417979192,0.521301686808497,12.9228763925409,10.9805895619474,0,0,0,0,3.32870879020994,0.30239029332968,3.47350930946288,3.83654933220156,6.17452207752762,2.05022638809122,3.07024349440022,4.66476371316462,7.42090332224955,1.54209693802656,3.19611105563629,0.410635780069046,0.519254429183621,0.813472649219715,0.604297247958111,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,1.29549549661284,15.4227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,2.36994326789761,0,0,1.14853107599234,0,1.6068392984416,2.80345083047154,0.462145851343933,0.614014698904518,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,3.82837753280971,0,0,0,0,1.39453664789186,11.333244485903,0.6970372701606,1.84820148105653,2.12922412126809,0,3.89180860118232,0.143124886741991,3.34942532423701,2.21465597303108,0.38126038784765,0,2.99557291623744,1.27281299170375,1.56989728039846,0.179872457583315,0,0.117812402345686,2.83055474202642,4.75530963519025,0.421258456238981,0,1.94970791705028,4.22600587027022,0.545999645631943,0.424216295861138,2.26016233240486,1.65409603063837,2.65375590096488,3.06915619677634,0,0,1.21746226177622,2.78841148289775,2.81695602532241,0,0.0982490410131212,1.07001315444375,0,2.32218398827431,1.64647446479951,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0.63337622438398,14.9435991188302,0,0,0,0,1.55519793830904,0,0,0,0.789147245095469,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0,1.76985594558733,0.113942055847001,0.23056390438806,0,0,1.5950057986596,1.19076871422421,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,4.01288823649394,0.468528891450678,0,0,0,0.789168805698781,1.20990716048664,0.61214552326098,2.96976924253893,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,1.04836000945218,0,0,0,0,0.678923115418936,0,2.48578814858586,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0.235694034616795,0,0,0,0.866851769704557,0,0.136905378891993,0,0,0,8.93703684071214,7.10397314436219,2.15361907373044,0.399358000997982,1.71690419254628,0.446342914883745,0.403100834920358,4.68389848605125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.788057072991982,0.314727528809989,0,0,0,3.57347663186684,2.64836788146173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| ||
|short_description=p12@BGN | |short_description=p12@BGN | ||
}} | }} |
Latest revision as of 00:10, 20 September 2015
Short description: | p12@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 243bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.09e-14 | 76 |
vascular associated smooth muscle cell | 4.52e-13 | 32 |
smooth muscle cell | 6.19e-09 | 43 |
smooth muscle myoblast | 6.19e-09 | 43 |
muscle cell | 1.57e-08 | 55 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
skin fibroblast | 1.65e-07 | 23 |
preadipocyte | 5.73e-07 | 12 |
electrically responsive cell | 6.00e-07 | 61 |
electrically active cell | 6.00e-07 | 61 |
extracellular matrix secreting cell | 9.99e-07 | 15 |