FFCP PHASE1:Hg19::chr5:122424918..122424944,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:122424918..122424944,+
|short_description=p1@PRDM6
|description=CAGE_peak_1_at_PRDM6_5end
|association_with_transcript=77bp_to_NM_001136239,uc003kti.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93166 | |EntrezGene=93166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9350 | |HGNC=9350 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQX0 | |UniProt=Q9NQX0 | ||
|association_with_transcript=77bp_to_NM_001136239,uc003kti.2_5end | |||
|cluster_id=chr5:122424918..122424944,+ | |||
|description=CAGE_peak_1_at_PRDM6_5end | |||
|id=chr5:122424918..122424944,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002598;3.66e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,3.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.14e-08;4!DOID:1612;3.14e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.51e-08,4;DOID:1612,4.51e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-14!115;UBERON:0003076!1.73e-10!15;UBERON:0003057!1.73e-10!15;UBERON:0004732!1.12e-08!13;UBERON:0004921!4.34e-08!129;UBERON:0004185!4.34e-08!129;UBERON:0000062!5.32e-08!511;UBERON:0000064!8.69e-08!219;UBERON:0000063!1.05e-07!97;UBERON:0004733!1.08e-07!12;UBERON:0002028!1.08e-07!12;UBERON:0007277!1.08e-07!12;UBERON:0001007!2.68e-07!155;UBERON:0001555!2.68e-07!155;UBERON:0007026!2.68e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;1.05e-08;2!UBERON:0000094;1.05e-08;2!UBERON:0010743;1.05e-08;2!UBERON:0000922;5.74e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,1.20e-08,2;UBERON:0000094,1.20e-08,2;UBERON:0010743,1.20e-08,2;UBERON:0007023,4.98e-08,114 | |||
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| ||
|short_description=p1@PRDM6 | |||
}} | }} |
Latest revision as of 00:04, 20 September 2015
Short description: | p1@PRDM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_NM_001136239, uc003kti.2_5end |
EntrezGene: | PRDM6 |
HGNC: | 9350 |
UniProt: | Q9NQX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 3.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
meninx | 1.20e-08 | 2 |
membrane organ | 1.20e-08 | 2 |
meningeal cluster | 1.20e-08 | 2 |
adult organism | 4.98e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.51e-08 | 4 |
breast cancer | 4.51e-08 | 4 |