FFCP PHASE1:Hg19::chr18:56203944..56203982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=368bp_to_AK092194,AX747403_5end | |association_with_transcript=368bp_to_AK092194,AX747403_5end | ||
|cluster_id=chr18:56203944..56203982,- | |||
|coexpression_cluster_id=C821 | |coexpression_cluster_id=C821 | ||
|description=CAGE_peak_17_at_ALPK2_5end | |description=CAGE_peak_17_at_ALPK2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.57e-73!42;CL:0000860!2.06e-67!45;CL:0002009!8.43e-47!65;CL:0000557!4.36e-44!71;CL:0002194!1.58e-43!63;CL:0000576!1.58e-43!63;CL:0000040!1.58e-43!63;CL:0000559!1.58e-43!63;CL:0000738!1.85e-42!140;CL:0000766!2.82e-40!76;CL:0000839!5.64e-38!70;CL:0002087!9.12e-36!119;CL:0000037!6.17e-34!172;CL:0000566!6.17e-34!172;CL:0000763!1.22e-32!112;CL:0000049!1.22e-32!112;CL:0002031!2.08e-32!124;CL:0000988!4.43e-31!182;CL:0002032!2.13e-29!165;CL:0000837!2.13e-29!165;CL:0000134!4.91e-17!358;CL:0002393!5.84e-17!9;CL:0002397!5.84e-17!9;CL:0002320!2.55e-16!365;CL:0000219!4.09e-15!390;CL:0000034!1.48e-13!444;CL:0000048!2.98e-13!430;CL:0000723!8.76e-13!436;CL:0000453!2.08e-11!5;CL:0000767!6.48e-07!3;CL:0000451!9.08e-07!10 | |ontology_enrichment_celltype=CL:0002057!3.57e-73!42;CL:0000860!2.06e-67!45;CL:0002009!8.43e-47!65;CL:0000557!4.36e-44!71;CL:0002194!1.58e-43!63;CL:0000576!1.58e-43!63;CL:0000040!1.58e-43!63;CL:0000559!1.58e-43!63;CL:0000738!1.85e-42!140;CL:0000766!2.82e-40!76;CL:0000839!5.64e-38!70;CL:0002087!9.12e-36!119;CL:0000037!6.17e-34!172;CL:0000566!6.17e-34!172;CL:0000763!1.22e-32!112;CL:0000049!1.22e-32!112;CL:0002031!2.08e-32!124;CL:0000988!4.43e-31!182;CL:0002032!2.13e-29!165;CL:0000837!2.13e-29!165;CL:0000134!4.91e-17!358;CL:0002393!5.84e-17!9;CL:0002397!5.84e-17!9;CL:0002320!2.55e-16!365;CL:0000219!4.09e-15!390;CL:0000034!1.48e-13!444;CL:0000048!2.98e-13!430;CL:0000723!8.76e-13!436;CL:0000453!2.08e-11!5;CL:0000767!6.48e-07!3;CL:0000451!9.08e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-67;33!CL:0002057;2.17e-67;33!CL:0000473;1.41e-45;39!CL:0000234;1.41e-45;39!CL:0000576;1.04e-41;48!CL:0000766;1.00e-28;69!CL:0002087;2.59e-15;104!CL:0000453;3.01e-14;5!CL:0000738;5.31e-12;136!CL:0000763;7.47e-12;100!CL:0002393;1.46e-10;6!CL:0002397;1.46e-10;6!CL:0000451;1.64e-09;10!CL:0000990;6.27e-08;8!CL:0000945;1.49e-07;24 | |ontology_enrichment_celltype_v019=CL:0000860;2.17e-67;33!CL:0002057;2.17e-67;33!CL:0000473;1.41e-45;39!CL:0000234;1.41e-45;39!CL:0000576;1.04e-41;48!CL:0000766;1.00e-28;69!CL:0002087;2.59e-15;104!CL:0000453;3.01e-14;5!CL:0000738;5.31e-12;136!CL:0000763;7.47e-12;100!CL:0002393;1.46e-10;6!CL:0002397;1.46e-10;6!CL:0000451;1.64e-09;10!CL:0000990;6.27e-08;8!CL:0000945;1.49e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-82,42;CL:0002057,1.43e-82,42;CL:0000473,2.40e-71,48;CL:0000234,2.40e-71,48;CL:0002009,1.40e-57,61;CL:0002194,1.25e-55,59;CL:0000576,1.25e-55,59;CL:0000040,1.25e-55,59;CL:0000559,1.25e-55,59;CL:0000557,2.31e-55,67;CL:0000766,5.88e-51,72;CL:0000738,4.45e-50,136;CL:0000839,4.63e-49,66;CL:0000763,3.33e-44,108;CL:0000049,3.33e-44,108;CL:0002031,1.86e-41,120;CL:0002087,5.37e-41,115;CL:0000037,6.36e-41,168;CL:0002032,6.54e-41,161;CL:0000837,6.54e-41,161;CL:0000988,2.16e-38,177;CL:0000134,1.28e-14,354;CL:0000453,3.68e-14,5;CL:0002320,3.74e-14,361;CL:0000219,1.62e-12,386;CL:0000034,2.12e-12,441;CL:0000048,2.41e-11,427;CL:0000723,4.69e-11,433;CL:0002393,1.59e-10,9;CL:0002397,1.59e-10,9;CL:0000451,1.73e-09,10;CL:0000990,6.99e-08,8;CL:0000945,1.66e-07,24;CL:0000826,1.66e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-57;42!CL:0000049;2.32e-13;108 | |ontology_enrichment_development_v019=CL:0002057;2.13e-57;42!CL:0000049;2.32e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002371!1.27e-39!80;UBERON:0002193!5.07e-38!112;UBERON:0001474!6.12e-36!86;UBERON:0002405!6.99e-32!115;UBERON:0004765!1.17e-28!101;UBERON:0001434!1.17e-28!101;UBERON:0003081!1.52e-16!216;UBERON:0002384!2.41e-15!375;UBERON:0002204!6.38e-15!167 | |ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002371!1.27e-39!80;UBERON:0002193!5.07e-38!112;UBERON:0001474!6.12e-36!86;UBERON:0002405!6.99e-32!115;UBERON:0004765!1.17e-28!101;UBERON:0001434!1.17e-28!101;UBERON:0003081!1.52e-16!216;UBERON:0002384!2.41e-15!375;UBERON:0002204!6.38e-15!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.27e-48,76;UBERON:0001474,5.50e-44,82;UBERON:0002405,8.83e-41,93;UBERON:0004765,1.88e-39,90;UBERON:0002390,2.50e-38,98;UBERON:0003061,2.50e-38,98;UBERON:0001434,8.56e-35,100;UBERON:0002193,4.24e-34,108;UBERON:0002204,2.43e-19,167;UBERON:0003081,7.93e-16,203;UBERON:0002384,1.61e-13,371;UBERON:0000926,1.62e-07,315;UBERON:0004120,1.62e-07,315;UBERON:0006603,1.62e-07,315 | |||
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|short_description=p17@ALPK2 | |short_description=p17@ALPK2 | ||
}} | }} |
Latest revision as of 23:55, 19 September 2015
Short description: | p17@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ALPK2_5end |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | 368bp_to_AK092194, AX747403_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.27e-48 | 76 |
bone element | 5.50e-44 | 82 |
immune system | 8.83e-41 | 93 |
skeletal element | 1.88e-39 | 90 |
hematopoietic system | 2.50e-38 | 98 |
blood island | 2.50e-38 | 98 |
skeletal system | 8.56e-35 | 100 |
hemolymphoid system | 4.24e-34 | 108 |
musculoskeletal system | 2.43e-19 | 167 |
lateral plate mesoderm | 7.93e-16 | 203 |
connective tissue | 1.61e-13 | 371 |
mesoderm | 1.62e-07 | 315 |
mesoderm-derived structure | 1.62e-07 | 315 |
presumptive mesoderm | 1.62e-07 | 315 |