FFCP PHASE1:Hg19::chr3:122283100..122283153,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24118 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9U8,Q8IXQ6 | |||
|association_with_transcript=0bp_to_ENST00000492382,NM_001146102,NM_001146105,uc003eff.3,uc010hri.2_5end | |||
|cluster_id=chr3:122283100..122283153,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_PARP9_5end | |||
|id=chr3:122283100..122283153,- | |||
|ontology_enrichment_celltype=CL:0002087!8.82e-23!119;CL:0000738!2.12e-22!140;CL:0002031!2.35e-21!124;CL:0000766!8.83e-20!76;CL:0002057!2.11e-19!42;CL:0000839!4.68e-18!70;CL:0002194!1.07e-17!63;CL:0000576!1.07e-17!63;CL:0000040!1.07e-17!63;CL:0000559!1.07e-17!63;CL:0000860!1.57e-16!45;CL:0002009!2.28e-16!65;CL:0002032!1.31e-15!165;CL:0000837!1.31e-15!165;CL:0000557!1.62e-15!71;CL:0000037!3.88e-15!172;CL:0000566!3.88e-15!172;CL:0000988!1.96e-13!182;CL:0002320!1.99e-10!365;CL:0000134!2.18e-10!358;CL:0000763!6.28e-10!112;CL:0000049!6.28e-10!112;CL:0000219!5.02e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-14;33!CL:0002057;1.04e-14;33!CL:0000473;1.69e-14;39!CL:0000234;1.69e-14;39!CL:0000576;3.39e-13;48!CL:0000766;1.20e-10;69!CL:0002087;8.11e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.37e-25,115;CL:0000738,1.08e-24,136;CL:0002031,9.35e-24,120;CL:0000766,6.76e-23,72;CL:0000473,6.04e-22,48;CL:0000234,6.04e-22,48;CL:0000839,3.72e-21,66;CL:0002194,5.47e-21,59;CL:0000576,5.47e-21,59;CL:0000040,5.47e-21,59;CL:0000559,5.47e-21,59;CL:0002009,2.03e-19,61;CL:0000860,2.09e-19,42;CL:0002057,2.09e-19,42;CL:0000557,2.79e-18,67;CL:0002032,2.81e-17,161;CL:0000837,2.81e-17,161;CL:0000037,9.79e-17,168;CL:0000988,6.26e-15,177;CL:0000763,1.81e-11,108;CL:0000049,1.81e-11,108;CL:0002320,4.58e-11,361;CL:0000134,4.99e-11,354;CL:0000219,1.56e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.04e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.06e-22!102;UBERON:0003061!7.06e-22!102;UBERON:0002193!1.38e-21!112;UBERON:0002371!1.58e-14!80;UBERON:0002405!1.81e-13!115;UBERON:0004765!1.47e-12!101;UBERON:0001434!1.47e-12!101;UBERON:0001474!1.81e-12!86;UBERON:0002384!2.13e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-24,98;UBERON:0003061,1.31e-24,98;UBERON:0002193,3.91e-24,108;UBERON:0002405,4.36e-19,93;UBERON:0002371,5.78e-17,76;UBERON:0004765,2.24e-15,90;UBERON:0001474,1.45e-14,82;UBERON:0001434,1.89e-14,100;UBERON:0002384,5.27e-10,371 | |||
|phase1_expression=2.72517568905835,4.49611100171065,3.24195129420734,4.00293193412522,7.59833860526389,9.59572376510406,12.6649939084155,10.7392378482561,5.22371256399677,3.68600904752263,1.39560233594486,2.18441372130172,3.4289707169699,12.8717007078448,11.5989081504771,2.6893005858071,3.01347264011988,2.19093027116212,3.90346239032406,9.97280570421982,2.04000691244253,1.56727360739044,26.0474748289262,8.21246550437305,10.4200390863686,34.538859398074,28.6531057180311,31.0907586189033,7.86728553697808,9.97956435052753,8.20525453575203,3.67768489791571,2.409647350226,1.84877005083394,0.387336002901508,8.81449241422014,8.80801318004542,14.9578760303607,11.2304890583279,15.4077718208255,32.467743764789,20.4053009591957,26.272707898687,10.03247847579,16.6265415223076,13.0995393041421,9.0647324393217,14.3908760807639,16.7241440283356,81.4169470271686,79.1536583174921,118.950561633958,23.0979606093534,16.7826017731795,31.1480919166986,10.7298133539285,15.2827444032394,16.1800908800461,54.7890167343916,36.5859090866747,40.9175760511386,74.8762451423846,84.7720544891935,93.7694451171927,77.7760759524605,35.1778839308507,49.825779919646,90.9520168229411,96.4743399077373,100.558435098469,72.6479403160043,52.6637019462217,87.3436189336841,40.5610149718928,30.1898105950362,27.6749412071056,27.6328432620378,25.8304255687391,20.7336006839233,19.3808665744049,34.2136684782435,29.9569212174,12.3197371122926,16.9302969491261,11.5636203002262,3.41384178053206,11.2110876370083,8.04653415936277,14.542987201267,8.58648379081828,6.26134266020393,14.6809297342735,11.8504700718821,3.96513985737078,23.5413596452245,12.6424360692037,17.3104597700173,9.82526906872912,9.45766895397742,27.7529582348526,7.82213439920617,11.8361951433683,3.89653456815823,25.5129946267047,17.0871426335406,19.4949827233587,23.8307400113214,28.3081816593742,27.5725816826942,26.3100647365882,19.8972012805811,30.7191270879156,15.4218025688543,18.4603171381902,12.5442628565972,26.6276955339281,12.6462762888634,14.0887252647878,31.3744418104184,13.6983128159362,14.9749194386976,14.2567806667256,24.8448946478325,21.8857105074055,18.7396089828519,16.8111848951252,10.6746639599736,15.7253259715291,15.5115313554434,10.2825326756787,4.87613732627923,10.7312137552582,5.24236503558474,11.9274920286907,12.0321098552613,12.7464936685525,12.7245751528176,14.1124112387764,12.9512699514773,6.87361132133948,7.90513071238134,12.5739912477804,0.364295288292542,1.48313777113772,18.8237488319716,18.6318818910216,23.7994749328769,2.38490624305342,4.0039643754609,3.34311751196608,3.57772333260069,3.4409383804245,4.51282652089873,1.13061588384802,2.93649605346934,2.47606237746061,2.71693456497854,6.71883573840255,15.6537155582153,9.0374565446461,8.05658634218294,6.0821768457481,7.56592378399325,10.2945662496843,5.67099363517232,13.2163597860438,4.71511682514957,6.86930030948266,3.06633274931766,3.79706263827252,1.09921046358244,19.7670626154095,50.4114343392823,2.18047026071267,6.95760732373446,7.34456967654563,8.07696002960635,20.6522366939146,6.02936249737207,8.41016400213461,1.06748995729705,5.42668606517752,8.71390899119346,7.13966561969347,7.5192475432191,7.56787138224657,8.64263886719998,2.57753575017176,4.99456122928513,2.2818872861778,4.93180645820944,4.69737994575059,3.88495066483516,6.17983549489893,14.9032545016072,6.5102188175237,14.2589578022556,46.3321114340001,14.5887488274349,6.37112953356618,2.87447256726495,5.72342787443825,4.37914819551875,9.6972440419464,7.90159717585508,4.90380473278431,12.4697588892475,3.74326204428069,9.68704032719855,13.2405581067512,11.2323907614568,9.00273288253207,17.9311400874884,20.0959621235591,9.86419338557426,6.41350062516812,10.4257595522483,23.4763410047026,11.1380377357182,34.5922561592257,13.4903645156313,5.64211750074785,9.83451435400828,10.6293469239813,14.4555443913142,9.17774705244812,1.21973706129595,0.795178609928912,1.2781333715647,1.86589899027667,1.26160425437814,0.36497735907583,28.1609158193669,18.0107462694008,4.14404764057442,12.0735661288315,13.7157101517221,5.08719240171329,6.06904884281166,3.37415441836875,4.30146493656336,2.83243277320128,5.21995362044413,5.25842101824641,4.12065076763227,5.77120735419586,5.90524363699719,1.40241773803446,4.9388881359768,2.94017422771084,48.1669132322957,31.450470933684,24.813176080619,2.6487785964879,15.7425201335185,6.51957679134397,4.06076056011915,1.1240175325762,12.0634766893957,10.2773174125968,13.6839488230336,3.11980435583874,4.3299402607582,10.0859452328317,4.69634776943287,11.4049493731248,6.01881166349594,10.2737242206683,7.11183958163348,2.57545848628462,35.4552488765852,21.2943881276706,23.4837236416191,4.68669169933885,39.1398358703343,41.5401034920192,1.70161193135412,2.61570544662566,0,25.6184883705891,22.7164959754123,5.59785911960085,6.62951785718023,5.30218220390796,9.39768835524102,12.9876064689814,14.0660936652056,1.71072446022705,2.87916979569306,8.40960561962969,24.0094203409686,6.50360289203092,9.15516144549888,4.5469737208989,2.71470603091333,7.1531289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| |||
|short_description=p1@PARP9 | |||
}} |
Latest revision as of 23:52, 19 September 2015
Short description: | p1@PARP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARP9_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000492382, NM_001146102, NM_001146105, uc003eff.3, uc010hri.2_5end |
EntrezGene: | PARP9 |
HGNC: | 24118 |
UniProt: | G5E9U8Q8IXQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.37e-25 | 115 |
leukocyte | 1.08e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 9.35e-24 | 120 |
myeloid leukocyte | 6.76e-23 | 72 |
defensive cell | 6.04e-22 | 48 |
phagocyte | 6.04e-22 | 48 |
myeloid lineage restricted progenitor cell | 3.72e-21 | 66 |
monopoietic cell | 5.47e-21 | 59 |
monocyte | 5.47e-21 | 59 |
monoblast | 5.47e-21 | 59 |
promonocyte | 5.47e-21 | 59 |
macrophage dendritic cell progenitor | 2.03e-19 | 61 |
classical monocyte | 2.09e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.09e-19 | 42 |
granulocyte monocyte progenitor cell | 2.79e-18 | 67 |
hematopoietic oligopotent progenitor cell | 2.81e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-17 | 161 |
hematopoietic stem cell | 9.79e-17 | 168 |
hematopoietic cell | 6.26e-15 | 177 |
myeloid cell | 1.81e-11 | 108 |
common myeloid progenitor | 1.81e-11 | 108 |
connective tissue cell | 4.58e-11 | 361 |
mesenchymal cell | 4.99e-11 | 354 |
motile cell | 1.56e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-24 | 98 |
blood island | 1.31e-24 | 98 |
hemolymphoid system | 3.91e-24 | 108 |
immune system | 4.36e-19 | 93 |
bone marrow | 5.78e-17 | 76 |
skeletal element | 2.24e-15 | 90 |
bone element | 1.45e-14 | 82 |
skeletal system | 1.89e-14 | 100 |
connective tissue | 5.27e-10 | 371 |