FFCP PHASE1:Hg19::chr1:95583232..95583264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148534,100527978,25950 | |EntrezGene=148534,100527978,25950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26477,21393 | |HGNC=26477,21393 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6J2 | |UniProt=C9J6J2 | ||
|association_with_transcript=-214bp_to_ENST00000455656,NM_001199691,uc001drd.3_5end | |association_with_transcript=-214bp_to_ENST00000455656,NM_001199691,uc001drd.3_5end | ||
|cluster_id=chr1:95583232..95583264,+ | |||
|coexpression_cluster_id=C2605 | |||
|description=CAGE_peak_3_at_RWDD3_5end,CAGE_peak_3_at_TMEM56_5end | |description=CAGE_peak_3_at_RWDD3_5end,CAGE_peak_3_at_TMEM56_5end | ||
|id=chr1:95583232..95583264,+ | |id=chr1:95583232..95583264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.25e-08;2!CL:0000558;3.25e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.39e-08,2;CL:0000765,3.39e-08,2;CL:0000050,3.39e-08,2;CL:0000038,3.39e-08,2;CL:0000558,3.39e-08,2;CL:0000547,3.39e-08,2;CL:0000549,3.39e-08,2;CL:0000550,3.39e-08,2;CL:0000552,3.39e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.79e-07;2!UBERON:0006601;3.53e-07;82 | |||
|ontology_enrichment_disease=DOID:305!7.99e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:114;4.71e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.08e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.71e-55!115;UBERON:0001049!1.26e-26!57;UBERON:0005068!1.26e-26!57;UBERON:0006241!1.26e-26!57;UBERON:0007135!1.26e-26!57;UBERON:0003075!3.77e-26!86;UBERON:0007284!3.77e-26!86;UBERON:0002780!8.87e-25!41;UBERON:0001890!8.87e-25!41;UBERON:0006240!8.87e-25!41;UBERON:0002346!9.51e-25!90;UBERON:0000955!4.96e-24!69;UBERON:0006238!4.96e-24!69;UBERON:0003080!7.71e-24!42;UBERON:0005743!2.70e-23!86;UBERON:0001893!4.94e-23!34;UBERON:0002020!6.88e-23!34;UBERON:0003528!6.88e-23!34;UBERON:0002791!1.29e-22!33;UBERON:0002616!2.37e-22!59;UBERON:0001017!3.33e-22!82;UBERON:0001869!5.96e-22!32;UBERON:0003056!2.82e-21!61;UBERON:0000073!1.28e-20!94;UBERON:0001016!1.28e-20!94;UBERON:0000153!2.73e-17!129;UBERON:0007811!2.73e-17!129;UBERON:0000033!5.25e-17!123;UBERON:0002619!9.20e-17!22;UBERON:0000956!3.21e-16!25;UBERON:0000203!3.21e-16!25;UBERON:0001950!3.11e-15!20;UBERON:0000481!2.15e-14!347;UBERON:0004121!1.75e-13!169;UBERON:0000477!4.44e-13!286;UBERON:0000924!4.87e-13!173;UBERON:0006601!4.87e-13!173;UBERON:0000064!1.17e-12!219;UBERON:0004111!5.77e-11!241;UBERON:0000062!2.54e-10!511;UBERON:0004921!3.64e-10!129;UBERON:0004185!3.64e-10!129;UBERON:0000025!4.82e-10!194;UBERON:0002420!2.26e-09!9;UBERON:0007245!2.26e-09!9;UBERON:0010009!2.26e-09!9;UBERON:0010011!2.26e-09!9;UBERON:0000454!2.26e-09!9;UBERON:0001007!7.12e-09!155;UBERON:0001555!7.12e-09!155;UBERON:0007026!7.12e-09!155;UBERON:0000483!2.49e-08!309;UBERON:0002308!3.41e-08!9;UBERON:0000125!3.41e-08!9;UBERON:0000077!3.51e-08!130;UBERON:0000119!5.56e-08!312;UBERON:0001737!7.88e-08!9;UBERON:0009663!1.18e-07!7;UBERON:0004119!4.58e-07!169;UBERON:0000925!4.58e-07!169;UBERON:0006595!4.58e-07!169;UBERON:0000475!5.99e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;7.62e-22;32!UBERON:0001869;2.79e-21;32!UBERON:0003528;4.05e-20;34!UBERON:0002020;4.05e-20;34!UBERON:0001893;3.04e-19;34!UBERON:0002780;4.69e-17;41!UBERON:0001890;4.69e-17;41!UBERON:0002619;7.60e-17;22!UBERON:0001950;1.13e-15;20!UBERON:0000956;1.37e-14;25!UBERON:0000203;1.37e-14;25!UBERON:0000369;3.37e-13;4!UBERON:0002435;3.37e-13;4!UBERON:0000204;3.37e-13;4!UBERON:0000073;1.41e-12;53!UBERON:0002616;1.41e-12;53!UBERON:0007023;1.84e-12;114!UBERON:0002420;2.33e-12;9!UBERON:0007245;2.33e-12;9!UBERON:0010009;2.33e-12;9!UBERON:0010011;2.33e-12;9!UBERON:0000454;2.33e-12;9!UBERON:0009663;1.75e-11;7!UBERON:0000955;5.10e-11;68!UBERON:0004151;1.62e-10;3!UBERON:0005383;1.62e-10;3!UBERON:0005382;1.62e-10;3!UBERON:0001870;2.97e-10;3!UBERON:0001017;4.51e-09;75!UBERON:0000125;7.54e-09;9!UBERON:0002308;7.54e-09;9!UBERON:0002702;1.48e-07;2!UBERON:0001873;1.79e-07;2!UBERON:0002081;1.79e-07;2!UBERON:0001016;3.44e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.89e-37,114;UBERON:0002791,8.65e-24,32;UBERON:0001869,8.65e-24,32;UBERON:0002780,1.39e-22,41;UBERON:0001890,1.39e-22,41;UBERON:0003080,1.39e-22,41;UBERON:0006240,1.39e-22,41;UBERON:0003528,3.54e-22,34;UBERON:0002020,3.54e-22,34;UBERON:0001893,3.54e-22,34;UBERON:0001049,5.14e-21,56;UBERON:0005068,5.14e-21,56;UBERON:0006241,5.14e-21,56;UBERON:0007135,5.14e-21,56;UBERON:0000073,2.25e-20,53;UBERON:0002616,2.25e-20,53;UBERON:0000955,7.09e-18,68;UBERON:0006238,7.09e-18,68;UBERON:0003056,3.02e-17,61;UBERON:0002619,3.23e-17,22;UBERON:0001017,3.47e-17,81;UBERON:0003075,3.56e-17,82;UBERON:0007284,3.56e-17,82;UBERON:0002346,4.33e-16,86;UBERON:0001950,4.47e-16,20;UBERON:0000956,6.50e-15,25;UBERON:0000203,6.50e-15,25;UBERON:0001016,7.02e-15,89;UBERON:0010314,1.51e-13,132;UBERON:0000369,2.16e-13,4;UBERON:0002435,2.16e-13,4;UBERON:0000204,2.16e-13,4;UBERON:0010082,2.16e-13,4;UBERON:0002420,1.12e-12,9;UBERON:0007245,1.12e-12,9;UBERON:0010009,1.12e-12,9;UBERON:0010011,1.12e-12,9;UBERON:0000454,1.12e-12,9;UBERON:0010371,2.96e-12,104;UBERON:0011216,3.00e-12,223;UBERON:0009663,1.27e-11,7;UBERON:0004151,1.22e-10,3;UBERON:0005383,1.39e-10,3;UBERON:0005382,1.39e-10,3;UBERON:0001870,2.25e-10,3;UBERON:0000025,1.28e-09,192;UBERON:0000125,5.91e-09,9;UBERON:0002308,5.91e-09,9;UBERON:0004121,7.44e-08,171;UBERON:0000924,7.44e-08,171;UBERON:0006601,7.44e-08,171;UBERON:0002081,1.46e-07,2;UBERON:0010227,1.46e-07,2;UBERON:0001873,1.51e-07,2;UBERON:0010122,1.51e-07,2;UBERON:0002702,1.67e-07,2;UBERON:0004111,2.05e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.709840800239063,1.01150814046861,0.723033089650446,0.661763836394364,0.653638332277218,0.71181185733329,1.07865046528132,0.784885860501384,1.53898862778556,0,0,0,0,8.87285243752816,1.96565443335525,7.68026878685825,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,9.64743457242112,11.5031598450956,0.256450125116389,0,0.325378394664303,5.87333766392017,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43736026136555,0,0,0,0,3.55213326462519,1.52927441428475,2.27858874869665,0.238231775457789,0.411362273086194,1.94541993357815,0.540031437238115,0.79312517629427,0,0,0,0,0,0.355709216742071,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,1.12284324244932,0,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,0.398495976502139,1.10513566212459,0,0.102268682502155,0.615424027305347,0,0.808815160325942,0.358042349351218,0,0.493217028184668,0,0,1.93866549219044,1.39152147242777,0,0,0.174919999992391,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0.583209226766509,0.173624994933292,3.54296554325536,1.4471572635049,0,0.995213339381022,1.18219047581419,1.75508317723178,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0.451191321234361,0.784250137270958,0.839107934879214,0.569261198172555,0.158936578980379,0.632994193584081,0.652931232636591,0.424059214301822,0.216388639742091,0,0.619202951523374,2.4441205797345,0,0.123563938946503,0,0.337005664903385,0.802577647298789,1.1713222286267,0,0.19566461893209,0,0.789168805698781,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.19351266257817,0,0.328461828212837,0.290967049465258,0,0.90392296312213,0,0,1.70939149080872,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0.114536596165916,1.71594997861965,0.14405479798815,0,0.235694034616795,0.407712618220842,0.209205692624666,0.101998217636322,0,2.40168115483916,0.821432273351958,0,0,0,0.837847203816763,0.687481272035051,1.43574604915363,1.19807400299395,1.28767814440971,1.78537165953498,1.34366944973453,0,0,0.157566364614447,0,0.202210631562555,0.196854963029498,0,0.795229689809303,1.22583065500418,0,0.137539436597234,0,0,0,1.94398581305679,0,0.709251365692784,0.314727528809989,0,0,1.15149118391667,3.57347663186684,2.64836788146173,0.25426853765475,0.542999601753713,0,0,1.19730191562487,0,0,0,9.96555189010961,11.9256200020999,0.258565912723101,0.26446520348538,0.684347351537318,0,0.747511887973863,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0.612691153526923,0,0,7.08854543973589,0.610131324509816,1.251909307065,1.14681839138014,0.554645257684261,0.310482014706917,0.415045904808692,0,0,0,0,0.468334905806882,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0.906823702049089,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0.512483037175893,0.345430341731199,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0,0.344429959321631,0,0.920529751259204,0,0,0,0,0.157265941855896,0.327628914576042,0,0,0.123935764259002,0,0,0,0,0,0,1.54150140231503,1.41696576325585,0.638535436228605,0.82046545696302,0.252071696221718,1.38314504928436,1.77623210195036,0,0.687034029507179,0,0,0.115525666150338,0,0,0,0.225630985047772,0,2.34454203369928,0,0,0.591424344868181,0.337687923091973,1.56215619722769,0.413373593002368,1.64881106504158,1.09394961803644,0,0,0,0.766574565837572,0,0,3.03482802118316,0.91064876540519,0,0,1.37190407549935,0.271878931907327,0.657727735628491,0.236387681767936,1.11231401892069,0.627944742804112,2.35673384874003,0.840816489941367,0.913158720509496,0.43185518243724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| ||
|short_description=p3@RWDD3,p3@TMEM56 | |short_description=p3@RWDD3,p3@TMEM56 | ||
}} | }} |
Latest revision as of 23:51, 19 September 2015
Short description: | p3@RWDD3, p3@TMEM56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RWDD3_5end, CAGE_peak_3_at_TMEM56_5end |
Coexpression cluster: | C2605_Reticulocytes_liver_Hepatocyte_retina_left_heart_gastrointestinal |
Association with transcript: | -214bp_to_ENST00000455656, NM_001199691, uc001drd.3_5end |
EntrezGene: | 148534,100527978,25950 |
HGNC: | 21393&submit=Submit 26477, 21393 |
UniProt: | C9J6J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.39e-08 | 2 |
erythroblast | 3.39e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 3.39e-08 | 2 |
erythroid progenitor cell | 3.39e-08 | 2 |
reticulocyte | 3.39e-08 | 2 |
proerythroblast | 3.39e-08 | 2 |
basophilic erythroblast | 3.39e-08 | 2 |
polychromatophilic erythroblast | 3.39e-08 | 2 |
orthochromatic erythroblast | 3.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.08e-07 | 2 |