FFCP PHASE1:Hg19::chr10:92980399..92980458,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:92980399..92980458,+ to FFCP PHASE1:Hg19::chr10:92980399..92980458,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84333 | |EntrezGene=84333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28264 | |HGNC=28264 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SE9 | |UniProt=Q86SE9 | ||
|association_with_transcript=30bp_to_NM_032373,uc001khi.2_5end | |||
|cluster_id=chr10:92980399..92980458,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_PCGF5_5end | |||
|id=chr10:92980399..92980458,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.75e-15!140;CL:0000037!1.65e-11!172;CL:0000566!1.65e-11!172;CL:0002031!2.82e-11!124;CL:0000988!1.08e-10!182;CL:0000766!1.33e-10!76;CL:0002032!1.48e-10!165;CL:0000837!1.48e-10!165;CL:0002087!2.26e-10!119;CL:0000839!7.56e-09!70;CL:0002009!1.71e-08!65;CL:0000763!4.30e-08!112;CL:0000049!4.30e-08!112;CL:0000115!4.42e-08!35;CL:0002194!4.78e-08!63;CL:0000576!4.78e-08!63;CL:0000040!4.78e-08!63;CL:0000559!4.78e-08!63;CL:0000557!4.79e-08!71;CL:0000213!2.07e-07!57;CL:0000215!2.07e-07!57;CL:0002139!2.20e-07!24;CL:0002078!6.85e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.84e-07;24!CL:0000115;3.40e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.27e-14,136;CL:0000037,5.16e-11,168;CL:0002031,8.70e-11,120;CL:0000766,3.94e-10,72;CL:0002032,4.47e-10,161;CL:0000837,4.47e-10,161;CL:0000988,5.02e-10,177;CL:0002087,6.82e-10,115;CL:0000839,2.20e-08,66;CL:0000115,2.64e-08,36;CL:0002009,4.94e-08,61;CL:0000763,1.22e-07,108;CL:0000049,1.22e-07,108;CL:0000213,1.28e-07,58;CL:0000215,1.28e-07,58;CL:0002194,1.37e-07,59;CL:0000576,1.37e-07,59;CL:0000040,1.37e-07,59;CL:0000559,1.37e-07,59;CL:0000557,1.38e-07,67;CL:0002139,2.20e-07,24;CL:0002078,4.20e-07,45;CL:0000473,8.21e-07,48;CL:0000234,8.21e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.46e-15!112;UBERON:0003081!3.35e-13!216;UBERON:0002390!2.57e-12!102;UBERON:0003061!2.57e-12!102;UBERON:0002405!4.89e-11!115;UBERON:0001009!2.18e-09!113;UBERON:0004535!1.26e-08!110;UBERON:0002371!3.33e-08!80;UBERON:0001474!5.98e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.75e-14,108;UBERON:0002390,8.04e-12,98;UBERON:0003061,8.04e-12,98;UBERON:0003081,8.35e-12,203;UBERON:0002405,6.38e-11,93;UBERON:0001009,4.18e-09,112;UBERON:0004535,2.38e-08,109;UBERON:0002371,9.58e-08,76 | |||
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| ||
|short_description=p2@PCGF5 | |||
}} | }} |
Latest revision as of 23:46, 19 September 2015
Short description: | p2@PCGF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCGF5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 30bp_to_NM_032373, uc001khi.2_5end |
EntrezGene: | PCGF5 |
HGNC: | 28264 |
UniProt: | Q86SE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.27e-14 | 136 |
hematopoietic stem cell | 5.16e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 8.70e-11 | 120 |
myeloid leukocyte | 3.94e-10 | 72 |
hematopoietic oligopotent progenitor cell | 4.47e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-10 | 161 |
hematopoietic cell | 5.02e-10 | 177 |
nongranular leukocyte | 6.82e-10 | 115 |
myeloid lineage restricted progenitor cell | 2.20e-08 | 66 |
endothelial cell | 2.64e-08 | 36 |
macrophage dendritic cell progenitor | 4.94e-08 | 61 |
myeloid cell | 1.22e-07 | 108 |
common myeloid progenitor | 1.22e-07 | 108 |
lining cell | 1.28e-07 | 58 |
barrier cell | 1.28e-07 | 58 |
monopoietic cell | 1.37e-07 | 59 |
monocyte | 1.37e-07 | 59 |
monoblast | 1.37e-07 | 59 |
promonocyte | 1.37e-07 | 59 |
granulocyte monocyte progenitor cell | 1.38e-07 | 67 |
endothelial cell of vascular tree | 2.20e-07 | 24 |
meso-epithelial cell | 4.20e-07 | 45 |
defensive cell | 8.21e-07 | 48 |
phagocyte | 8.21e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.75e-14 | 108 |
hematopoietic system | 8.04e-12 | 98 |
blood island | 8.04e-12 | 98 |
lateral plate mesoderm | 8.35e-12 | 203 |
immune system | 6.38e-11 | 93 |
circulatory system | 4.18e-09 | 112 |
cardiovascular system | 2.38e-08 | 109 |
bone marrow | 9.58e-08 | 76 |