FFCP PHASE1:Hg19::chr7:92076686..92076700,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:92076686..92076700,+
|short_description=p3@GATAD1
|description=CAGE_peak_3_at_GATAD1_5end
|association_with_transcript=-64bp_to_NM_021167,uc003ulx.1,uc011k...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57798 | |EntrezGene=57798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29941 | |HGNC=29941 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUU5 | |UniProt=Q8WUU5 | ||
|association_with_transcript=-64bp_to_NM_021167,uc003ulx.1,uc011khq.1_5end | |||
|cluster_id=chr7:92076686..92076700,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_GATAD1_5end | |||
|id=chr7:92076686..92076700,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.84e-36!53;CL:0000051!8.84e-36!53;CL:0000838!2.36e-35!52;CL:0000037!7.77e-28!172;CL:0000566!7.77e-28!172;CL:0000988!8.06e-26!182;CL:0002032!5.68e-24!165;CL:0000837!5.68e-24!165;CL:0000738!1.10e-22!140;CL:0002087!5.23e-22!119;CL:0002031!1.60e-19!124;CL:0000084!5.93e-19!25;CL:0000827!5.93e-19!25;CL:0000791!8.52e-16!18;CL:0000789!8.52e-16!18;CL:0002420!8.52e-16!18;CL:0002419!8.52e-16!18;CL:0000790!8.52e-16!18;CL:0000945!3.55e-15!24;CL:0000826!3.55e-15!24;CL:0000236!2.51e-12!14;CL:0000625!2.13e-10!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.63e-33;18!CL:0000789;2.63e-33;18!CL:0002419;2.63e-33;18!CL:0000542;8.62e-33;53!CL:0000236;2.80e-29;13!CL:0000084;9.14e-29;25!CL:0000945;5.19e-22;24!CL:0000625;2.06e-21;11!CL:0000624;6.97e-16;6!CL:0000898;1.03e-08;3!CL:0000226;6.58e-08;3!CL:0000842;6.58e-08;3!CL:0002087;1.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.63e-53,52;CL:0000542,7.39e-52,53;CL:0000051,7.39e-52,53;CL:0000791,2.12e-33,18;CL:0000789,2.12e-33,18;CL:0002420,2.12e-33,18;CL:0002419,2.12e-33,18;CL:0000790,2.12e-33,18;CL:0000084,8.01e-29,25;CL:0000827,8.01e-29,25;CL:0000236,2.44e-27,14;CL:0002087,5.49e-25,115;CL:0000738,2.50e-23,136;CL:0000037,2.90e-22,168;CL:0000945,3.91e-22,24;CL:0000826,3.91e-22,24;CL:0002031,5.31e-22,120;CL:0000625,9.97e-22,11;CL:0000988,1.75e-20,177;CL:0002032,7.57e-18,161;CL:0000837,7.57e-18,161;CL:0000624,1.25e-15,6;CL:0000898,1.62e-08,3;CL:0000226,1.00e-07,3;CL:0000842,1.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.63e-33;18!CL:0000051;8.62e-33;53 | |||
|ontology_enrichment_disease=DOID:2531!1.50e-09!51;DOID:0060083!1.50e-09!51;DOID:1240!4.72e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.88e-09;15!UBERON:0000179;3.88e-09;15!UBERON:0000463;3.88e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.50e-09,15;UBERON:0000179,5.50e-09,15;UBERON:0000463,5.50e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.229240217243854,0.492603536699674,0.393553906568396,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0,1.00707360754392,1.13735385989937,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0.419317291016752,0.673971786878971,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,3.51992488922645,2.73069305631066,2.66852776159066,1.70692089026603,3.2031678962881,1.14950487990897,2.64417949113945,1.90810750907073,1.70763890732835,1.76171156811282,1.91136614062614,0,0,0,2.360517241366,3.93010762749165,2.05601498999509,1.83905144929746,4.23698946623668,3.78758244587787,11.6896037044747,1.6711568532776,1.17842362989935,2.43687284041983,3.79125409271022,1.28091319725675,1.56071217071854,1.64437904603676,0.276350017785848,2.31842468588042,4.89345658434799,3.74557159325598,2.09071047609954,1.81294948316106,3.44898444241729,3.4362744548263,1.77113784413652,2.54852331459277,2.60433381542567,3.8018081777935,1.95747654801105,3.07167866770604,1.24930726552346,0.947109008176067,2.46338399076314,2.21767417547206,1.60464117470104,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0.741568885568859,0,0,0,2.14641561874808,0.571994910780128,2.22874500797739,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.413303124703062,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0.788123040807709,2.37190332345469,1.79680250791648,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,1.03384013061444,1.72571360654893,2.24127871387233,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,2.02979043692868,0,0.569647187174163,1.90585420366231,2.05681136543097,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,1.15415370381156,0.995985806877798,1.91311527274587,0.399158742865633,0.5745161103971,0.211673582723883,0.649243880549111,0.842391534340376,2.05411211129873,0.626719583092093,0,0.50787533340481,0.321176150207399,0,1.27753871307098,0.343505344755765,0.307240764308458,0,0.834245708559542,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.445773537109913,0,0.47748896947538,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,1.99613798001194,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0,1.77148277162768,0.844175070377856,0,0.221158519862449,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0,0.37950746544837,0,0.210998064528027,0.163232808159148,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,1.45963831372533,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.387956065953678,0.176512253383001,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,2.55493176133945,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0.169346664131569,0.795229689809303,0.272406812223151,0,0.275078873194468,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,1.94868157409433,0,0,0.5013797880454,0,0,0.314108192500469,0.886068179966986,0.122026264901963,0,0,0.221858103073705,0.248385611765534,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0.151230923763239,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| ||
|short_description=p3@GATAD1 | |||
}} | }} |
Latest revision as of 23:44, 19 September 2015
Short description: | p3@GATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GATAD1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -64bp_to_NM_021167, uc003ulx.1, uc011khq.1_5end |
EntrezGene: | GATAD1 |
HGNC: | 29941 |
UniProt: | Q8WUU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.63e-53 | 52 |
lymphocyte | 7.39e-52 | 53 |
common lymphoid progenitor | 7.39e-52 | 53 |
mature alpha-beta T cell | 2.12e-33 | 18 |
alpha-beta T cell | 2.12e-33 | 18 |
immature T cell | 2.12e-33 | 18 |
mature T cell | 2.12e-33 | 18 |
immature alpha-beta T cell | 2.12e-33 | 18 |
T cell | 8.01e-29 | 25 |
pro-T cell | 8.01e-29 | 25 |
B cell | 2.44e-27 | 14 |
nongranular leukocyte | 5.49e-25 | 115 |
leukocyte | 2.50e-23 | 136 |
hematopoietic stem cell | 2.90e-22 | 168 |
lymphocyte of B lineage | 3.91e-22 | 24 |
pro-B cell | 3.91e-22 | 24 |
hematopoietic lineage restricted progenitor cell | 5.31e-22 | 120 |
CD8-positive, alpha-beta T cell | 9.97e-22 | 11 |
hematopoietic cell | 1.75e-20 | 177 |
hematopoietic oligopotent progenitor cell | 7.57e-18 | 161 |
hematopoietic multipotent progenitor cell | 7.57e-18 | 161 |
CD4-positive, alpha-beta T cell | 1.25e-15 | 6 |
naive T cell | 1.62e-08 | 3 |
single nucleate cell | 1.00e-07 | 3 |
mononuclear cell | 1.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.50e-09 | 15 |
haemolymphatic fluid | 5.50e-09 | 15 |
organism substance | 5.50e-09 | 15 |