FFCP PHASE1:Hg19::chr11:7110306..7110333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27288 | |EntrezGene=27288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17886 | |HGNC=17886 | ||
|TSSclassifier=strong | |||
|UniProt=O75526 | |UniProt=O75526 | ||
|association_with_transcript=141bp_to_ENST00000306904,NM_014469,uc001mfc.2_5end | |association_with_transcript=141bp_to_ENST00000306904,NM_014469,uc001mfc.2_5end | ||
|cluster_id=chr11:7110306..7110333,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_RBMXL2_5end | |description=CAGE_peak_2_at_RBMXL2_5end | ||
|id=chr11:7110306..7110333,+ | |id=chr11:7110306..7110333,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.30e-19!7;CL:0000586!6.30e-19!7 | |ontology_enrichment_celltype=CL:0000039!6.30e-19!7;CL:0000586!6.30e-19!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.53e-63;10!UBERON:0005564;2.53e-63;10!UBERON:0006603;2.20e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.68e-46!11;UBERON:0000473!1.05e-44!8;UBERON:0003101!3.29e-23!22;UBERON:0000079!3.29e-23!22;UBERON:0000991!4.06e-17!21;UBERON:0009196!4.06e-17!21;UBERON:0009117!4.06e-17!21;UBERON:0005564!4.06e-17!21;UBERON:0004176!2.42e-16!22;UBERON:0001301!1.16e-15!1;UBERON:0007190!3.17e-15!1;UBERON:0003886!1.16e-10!63;UBERON:0003133!1.63e-10!48;UBERON:0002553!1.52e-09!70;UBERON:0005156!1.70e-08!59;UBERON:0000990!1.70e-08!59;UBERON:0002323!8.37e-08!46;UBERON:0004458!2.55e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.08e-79;8!UBERON:0003135;1.15e-57;11!UBERON:0000991;1.13e-30;21!UBERON:0003101;2.54e-29;22!UBERON:0000079;2.54e-29;22!UBERON:0002323;3.51e-12;45!UBERON:0003133;6.98e-10;44!UBERON:0002553;4.48e-08;52!UBERON:0004458;8.61e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.08e-79,8;UBERON:0003135,1.15e-57,11;UBERON:0000991,1.13e-30,21;UBERON:0009196,1.13e-30,21;UBERON:0009117,1.13e-30,21;UBERON:0005564,1.13e-30,21;UBERON:0004176,2.54e-29,22;UBERON:0003101,2.54e-29,22;UBERON:0000079,2.54e-29,22;UBERON:0002323,1.89e-14,46;UBERON:0003133,7.05e-14,48;UBERON:0004458,1.31e-13,49;UBERON:0003886,2.04e-12,54;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0002553,4.53e-11,61 | |||
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|short_description=p2@RBMXL2 | |short_description=p2@RBMXL2 | ||
}} | }} |
Latest revision as of 23:41, 19 September 2015
Short description: | p2@RBMXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBMXL2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 141bp_to_ENST00000306904, NM_014469, uc001mfc.2_5end |
EntrezGene: | RBMXL2 |
HGNC: | 17886 |
UniProt: | O75526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.08e-79 | 8 |
male reproductive organ | 1.15e-57 | 11 |
gonad | 1.13e-30 | 21 |
indifferent external genitalia | 1.13e-30 | 21 |
indifferent gonad | 1.13e-30 | 21 |
gonad primordium | 1.13e-30 | 21 |
external genitalia | 2.54e-29 | 22 |
male organism | 2.54e-29 | 22 |
male reproductive system | 2.54e-29 | 22 |
body cavity | 1.89e-14 | 46 |
reproductive organ | 7.05e-14 | 48 |
body cavity or lining | 1.31e-13 | 49 |
body cavity precursor | 2.04e-12 | 54 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
anatomical cavity | 4.53e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.51e-08 | 22 |
germ cell cancer | 3.51e-08 | 22 |