FFCP PHASE1:Hg19::chr10:92922581..92922624,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28264 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-150bp_to_uc001khg.2,uc001khh.2_5end | |||
|cluster_id=chr10:92922581..92922624,+ | |||
|coexpression_cluster_id=C1600 | |||
|description=CAGE_peak_5_at_PCGF5_5end | |||
|id=chr10:92922581..92922624,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.91e-09!124;CL:0000738!4.53e-09!140;CL:0002087!4.54e-08!119;CL:0000860!1.74e-07!45;CL:0002057!6.50e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.99e-10,120;CL:0000738,6.31e-10,136;CL:0002087,4.49e-09,115;CL:0000860,2.31e-07,42;CL:0002057,2.31e-07,42;CL:0000838,8.62e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.19e-44!115;UBERON:0001049!5.57e-15!57;UBERON:0005068!5.57e-15!57;UBERON:0006241!5.57e-15!57;UBERON:0007135!5.57e-15!57;UBERON:0002616!6.80e-13!59;UBERON:0003080!4.78e-12!42;UBERON:0002780!9.52e-12!41;UBERON:0001890!9.52e-12!41;UBERON:0006240!9.52e-12!41;UBERON:0000955!8.15e-11!69;UBERON:0006238!8.15e-11!69;UBERON:0002020!7.56e-10!34;UBERON:0003528!7.56e-10!34;UBERON:0001893!2.03e-09!34;UBERON:0002791!2.95e-09!33;UBERON:0001017!7.06e-09!82;UBERON:0005743!1.45e-08!86;UBERON:0001869!1.51e-08!32;UBERON:0003075!7.48e-08!86;UBERON:0007284!7.48e-08!86;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102;UBERON:0002619!4.65e-07!22;UBERON:0000153!5.21e-07!129;UBERON:0007811!5.21e-07!129;UBERON:0000073!5.54e-07!94;UBERON:0001016!5.54e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.06e-12;114!UBERON:0002780;5.07e-09;41!UBERON:0001890;5.07e-09;41!UBERON:0003528;1.22e-08;34!UBERON:0002020;1.22e-08;34!UBERON:0000073;2.04e-08;53!UBERON:0002616;2.04e-08;53!UBERON:0001893;2.95e-08;34!UBERON:0002791;4.08e-08;32!UBERON:0001869;7.33e-08;32!UBERON:0002619;1.23e-07;22!UBERON:0001950;8.83e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.58e-46,114;UBERON:0001049,4.47e-15,56;UBERON:0005068,4.47e-15,56;UBERON:0006241,4.47e-15,56;UBERON:0007135,4.47e-15,56;UBERON:0000073,4.32e-14,53;UBERON:0002616,4.32e-14,53;UBERON:0002780,6.65e-12,41;UBERON:0001890,6.65e-12,41;UBERON:0003080,6.65e-12,41;UBERON:0006240,6.65e-12,41;UBERON:0000955,1.91e-10,68;UBERON:0006238,1.91e-10,68;UBERON:0003528,7.36e-10,34;UBERON:0002020,7.36e-10,34;UBERON:0001893,2.06e-09,34;UBERON:0002791,9.08e-09,32;UBERON:0001017,1.07e-08,81;UBERON:0001869,1.73e-08,32;UBERON:0003075,3.57e-08,82;UBERON:0007284,3.57e-08,82;UBERON:0002390,5.16e-08,98;UBERON:0003061,5.16e-08,98;UBERON:0001016,1.84e-07,89;UBERON:0002619,2.39e-07,22;UBERON:0010314,5.59e-07,132;UBERON:0002346,7.49e-07,86 | |||
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| |||
|short_description=p5@PCGF5 | |||
}} |
Latest revision as of 23:40, 19 September 2015
Short description: | p5@PCGF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCGF5_5end |
Coexpression cluster: | C1600_blood_Whole_optic_spinal_locus_globus_thalamus |
Association with transcript: | -150bp_to_uc001khg.2, uc001khh.2_5end |
EntrezGene: | PCGF5 |
HGNC: | 28264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.99e-10 | 120 |
leukocyte | 6.31e-10 | 136 |
nongranular leukocyte | 4.49e-09 | 115 |
classical monocyte | 2.31e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-07 | 42 |
lymphoid lineage restricted progenitor cell | 8.62e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.58e-46 | 114 |
neural tube | 4.47e-15 | 56 |
neural rod | 4.47e-15 | 56 |
future spinal cord | 4.47e-15 | 56 |
neural keel | 4.47e-15 | 56 |
regional part of nervous system | 4.32e-14 | 53 |
regional part of brain | 4.32e-14 | 53 |
regional part of forebrain | 6.65e-12 | 41 |
forebrain | 6.65e-12 | 41 |
anterior neural tube | 6.65e-12 | 41 |
future forebrain | 6.65e-12 | 41 |
brain | 1.91e-10 | 68 |
future brain | 1.91e-10 | 68 |
brain grey matter | 7.36e-10 | 34 |
gray matter | 7.36e-10 | 34 |
telencephalon | 2.06e-09 | 34 |
regional part of telencephalon | 9.08e-09 | 32 |
central nervous system | 1.07e-08 | 81 |
cerebral hemisphere | 1.73e-08 | 32 |
neural plate | 3.57e-08 | 82 |
presumptive neural plate | 3.57e-08 | 82 |
hematopoietic system | 5.16e-08 | 98 |
blood island | 5.16e-08 | 98 |
nervous system | 1.84e-07 | 89 |
regional part of cerebral cortex | 2.39e-07 | 22 |
structure with developmental contribution from neural crest | 5.59e-07 | 132 |
neurectoderm | 7.49e-07 | 86 |