FFCP PHASE1:Hg19::chr22:35719490..35719507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10043 | |EntrezGene=10043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11982 | |HGNC=11982 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000497448_5end | |association_with_transcript=157bp_to_ENST00000497448_5end | ||
|cluster_id=chr22:35719490..35719507,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_TOM1_5end | |description=CAGE_peak_5_at_TOM1_5end | ||
|id=chr22:35719490..35719507,+ | |id=chr22:35719490..35719507,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.60e-23!42;CL:0000860!8.30e-21!45;CL:0000766!4.71e-17!76;CL:0002194!7.23e-16!63;CL:0000576!7.23e-16!63;CL:0000040!7.23e-16!63;CL:0000559!7.23e-16!63;CL:0002009!1.05e-15!65;CL:0000839!6.12e-15!70;CL:0000557!8.50e-15!71;CL:0000738!2.02e-09!140;CL:0000763!2.45e-09!112;CL:0000049!2.45e-09!112;CL:0000134!4.82e-08!358;CL:0002320!6.53e-08!365;CL:0002087!1.03e-07!119;CL:0002031!2.22e-07!124;CL:0000048!7.81e-07!430;CL:0000034!9.20e-07!444 | |ontology_enrichment_celltype=CL:0002057!6.60e-23!42;CL:0000860!8.30e-21!45;CL:0000766!4.71e-17!76;CL:0002194!7.23e-16!63;CL:0000576!7.23e-16!63;CL:0000040!7.23e-16!63;CL:0000559!7.23e-16!63;CL:0002009!1.05e-15!65;CL:0000839!6.12e-15!70;CL:0000557!8.50e-15!71;CL:0000738!2.02e-09!140;CL:0000763!2.45e-09!112;CL:0000049!2.45e-09!112;CL:0000134!4.82e-08!358;CL:0002320!6.53e-08!365;CL:0002087!1.03e-07!119;CL:0002031!2.22e-07!124;CL:0000048!7.81e-07!430;CL:0000034!9.20e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.69e-74;33!CL:0002057;6.69e-74;33!CL:0000473;1.82e-60;39!CL:0000234;1.82e-60;39!CL:0000576;1.47e-38;48!CL:0000766;3.31e-31;69!CL:0000763;1.01e-14;100!CL:0000775;9.48e-10;3!CL:0002087;3.00e-09;104!CL:0000738;4.70e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.87e-74,48;CL:0000234,2.87e-74,48;CL:0000860,8.91e-72,42;CL:0002057,8.91e-72,42;CL:0000766,1.71e-57,72;CL:0002194,1.85e-57,59;CL:0000576,1.85e-57,59;CL:0000040,1.85e-57,59;CL:0000559,1.85e-57,59;CL:0002009,2.73e-55,61;CL:0000839,1.95e-50,66;CL:0000557,1.50e-49,67;CL:0000763,5.00e-35,108;CL:0000049,5.00e-35,108;CL:0000738,9.53e-26,136;CL:0002087,4.44e-25,115;CL:0002031,1.18e-23,120;CL:0002032,3.38e-20,161;CL:0000837,3.38e-20,161;CL:0000037,6.09e-19,168;CL:0000988,1.78e-17,177;CL:0000134,7.41e-15,354;CL:0002320,2.56e-14,361;CL:0000219,2.02e-12,386;CL:0000048,4.12e-10,427;CL:0000775,7.69e-10,3;CL:0000723,8.57e-10,433;CL:0000034,2.20e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-53;42!CL:0000049;1.35e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-12!80;UBERON:0004765!2.82e-11!101;UBERON:0001434!2.82e-11!101;UBERON:0001474!4.09e-11!86;UBERON:0002204!1.01e-08!167;UBERON:0002390!2.97e-08!102;UBERON:0003061!2.97e-08!102;UBERON:0002193!4.16e-07!112;UBERON:0002384!5.28e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-45,76;UBERON:0001474,2.49e-41,82;UBERON:0002405,1.24e-37,93;UBERON:0004765,7.89e-37,90;UBERON:0001434,3.51e-34,100;UBERON:0002390,4.64e-33,98;UBERON:0003061,4.64e-33,98;UBERON:0002193,4.48e-31,108;UBERON:0002204,9.31e-18,167;UBERON:0002384,2.15e-14,371;UBERON:0003081,3.28e-11,203;UBERON:0000926,3.89e-09,315;UBERON:0004120,3.89e-09,315;UBERON:0006603,3.89e-09,315 | |||
|phase1_expression=0.54503513781167,2.14100523890983,0.704772020479856,0,1.34088328328186,0,0,0,1.30592814099919,0,0.697801167972428,0,0.263766978228454,0.37129905888014,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0,0.305653622991805,0.0821005894499457,0.0787107813136792,1.57345710739562,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,0.553995408531877,2.80762226458198,1.51907609501096,0,0,0.257575567634187,3.48955773070955,3.77875943688809,2.91100873425379,4.88100977501938,2.87817521615278,4.33588919253145,6.04154023876516,3.84241059793651,5.91205574721463,2.41321976515633,3.22742341791913,6.77132432971709,6.77672422353377,5.45812300115692,3.37085226667627,3.97909060082173,2.24650318953266,3.83602275479425,2.96866170168044,4.3882004676759,0.852449501065388,8.12585868160035,2.8369261234557,4.9825779919646,6.53246529667532,5.21482918420201,6.08128765174327,3.63239701580021,2.94622108790052,2.53169909952708,0.633765858935825,0.212604299965044,0.209658645508376,0.673971786878971,1.20141514273205,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.822405995998037,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.520237390239513,0.164437904603676,0,0.579606171470105,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0,0,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.732186172644509,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,2.87447256726495,0,0.625592599359821,0.277064115484183,0,1.22595118319608,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0.412210116953756,0.515281080091258,0.558350568994769,0.337552664482532,0.389748020644795,0.252433774244115,0.368199594569197,0.646584227275248,1.77504796258307,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0.414644220061482,0.504641701751257,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0.71181185733329,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,2.43247561282381,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0,1.49801404789436,2.99161459204025,2.48649308061621,0,0,0,0.207970861530807,0.713715955188647,0.788512075169673,0.35142424497814,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,0,0.413536052245775,0.215714200818617,0.74709290462411,0.303127571446259,0,0.30239029332968,1.73675465473144,0.460385919864187,0.841980283299221,0.512556597022804,1.02341449813341,0.160853921143607,1.48418066444991,0.616838775210622,0.532685175939381,0.0821271560138091,0,0.929683027679674,0.362578348774867,0.200506470303285,0.184161977871793,0.34444334449382,0.182091168006717,0.917870904715969,0.451199612907412,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0.307007349452259,0.275673144969061,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0.949138274156178,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.633322905892992,0.658589785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| ||
|short_description=p5@TOM1 | |short_description=p5@TOM1 | ||
}} | }} |
Latest revision as of 23:35, 19 September 2015
Short description: | p5@TOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TOM1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 157bp_to_ENST00000497448_5end |
EntrezGene: | TOM1 |
HGNC: | 11982 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.87e-74 | 48 |
phagocyte | 2.87e-74 | 48 |
classical monocyte | 8.91e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.91e-72 | 42 |
myeloid leukocyte | 1.71e-57 | 72 |
monopoietic cell | 1.85e-57 | 59 |
monocyte | 1.85e-57 | 59 |
monoblast | 1.85e-57 | 59 |
promonocyte | 1.85e-57 | 59 |
macrophage dendritic cell progenitor | 2.73e-55 | 61 |
myeloid lineage restricted progenitor cell | 1.95e-50 | 66 |
granulocyte monocyte progenitor cell | 1.50e-49 | 67 |
myeloid cell | 5.00e-35 | 108 |
common myeloid progenitor | 5.00e-35 | 108 |
leukocyte | 9.53e-26 | 136 |
nongranular leukocyte | 4.44e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.18e-23 | 120 |
hematopoietic oligopotent progenitor cell | 3.38e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.38e-20 | 161 |
hematopoietic stem cell | 6.09e-19 | 168 |
hematopoietic cell | 1.78e-17 | 177 |
mesenchymal cell | 7.41e-15 | 354 |
connective tissue cell | 2.56e-14 | 361 |
motile cell | 2.02e-12 | 386 |
multi fate stem cell | 4.12e-10 | 427 |
neutrophil | 7.69e-10 | 3 |
somatic stem cell | 8.57e-10 | 433 |
stem cell | 2.20e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.53e-45 | 76 |
bone element | 2.49e-41 | 82 |
immune system | 1.24e-37 | 93 |
skeletal element | 7.89e-37 | 90 |
skeletal system | 3.51e-34 | 100 |
hematopoietic system | 4.64e-33 | 98 |
blood island | 4.64e-33 | 98 |
hemolymphoid system | 4.48e-31 | 108 |
musculoskeletal system | 9.31e-18 | 167 |
connective tissue | 2.15e-14 | 371 |
lateral plate mesoderm | 3.28e-11 | 203 |
mesoderm | 3.89e-09 | 315 |
mesoderm-derived structure | 3.89e-09 | 315 |
presumptive mesoderm | 3.89e-09 | 315 |