FFCP PHASE1:Hg19::chr1:203596080..203596091,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |||
|TSSclassifier=strong | |||
|UniProt=P23634 | |||
|association_with_transcript=152bp_to_ENST00000367218,ENST00000367219,ENST00000391954,uc001gzv.2,uc001gzw.2_5end | |||
|cluster_id=chr1:203596080..203596091,+ | |||
|description=CAGE_peak_7_at_ATP2B4_5end | |||
|id=chr1:203596080..203596091,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-09!180;CL:0000057!1.80e-07!75;CL:0000680!4.99e-07!57;CL:0000056!4.99e-07!57;CL:0000355!4.99e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.52e-19!115;UBERON:0001049!1.39e-12!57;UBERON:0005068!1.39e-12!57;UBERON:0006241!1.39e-12!57;UBERON:0007135!1.39e-12!57;UBERON:0000955!2.02e-11!69;UBERON:0006238!2.02e-11!69;UBERON:0001017!2.74e-11!82;UBERON:0002020!5.70e-11!34;UBERON:0003528!5.70e-11!34;UBERON:0002616!7.51e-11!59;UBERON:0005743!9.04e-11!86;UBERON:0002780!9.16e-11!41;UBERON:0001890!9.16e-11!41;UBERON:0006240!9.16e-11!41;UBERON:0001893!9.88e-11!34;UBERON:0002791!1.64e-10!33;UBERON:0000475!1.80e-10!365;UBERON:0003080!4.72e-10!42;UBERON:0000073!5.82e-10!94;UBERON:0001016!5.82e-10!94;UBERON:0001869!8.31e-10!32;UBERON:0003075!2.48e-09!86;UBERON:0007284!2.48e-09!86;UBERON:0004121!2.72e-09!169;UBERON:0000153!4.43e-09!129;UBERON:0007811!4.43e-09!129;UBERON:0000914!7.10e-09!83;UBERON:0002329!7.10e-09!83;UBERON:0003077!7.10e-09!83;UBERON:0003059!7.10e-09!83;UBERON:0007282!7.10e-09!83;UBERON:0009618!7.10e-09!83;UBERON:0007285!7.10e-09!83;UBERON:0000033!1.99e-08!123;UBERON:0000924!2.61e-08!173;UBERON:0006601!2.61e-08!173;UBERON:0002346!6.23e-08!90;UBERON:0000481!6.44e-08!347;UBERON:0004290!8.48e-08!70;UBERON:0002385!1.18e-07!63;UBERON:0001015!1.18e-07!63;UBERON:0000383!1.18e-07!63;UBERON:0000956!3.99e-07!25;UBERON:0000203!3.99e-07!25;UBERON:0000486!4.73e-07!82;UBERON:0001134!6.20e-07!61;UBERON:0002036!6.20e-07!61;UBERON:0003082!6.20e-07!61;UBERON:0002619!8.39e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.85e-09;34!UBERON:0002020;2.85e-09;34!UBERON:0001893;3.69e-09;34!UBERON:0002791;9.62e-09;32!UBERON:0001869;1.83e-08;32!UBERON:0002780;2.91e-07;41!UBERON:0001890;2.91e-07;41!UBERON:0002420;3.28e-07;9!UBERON:0007245;3.28e-07;9!UBERON:0010009;3.28e-07;9!UBERON:0010011;3.28e-07;9!UBERON:0000454;3.28e-07;9!UBERON:0000125;5.23e-07;9!UBERON:0002308;5.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.34e-18,114;UBERON:0001049,6.91e-13,56;UBERON:0005068,6.91e-13,56;UBERON:0006241,6.91e-13,56;UBERON:0007135,6.91e-13,56;UBERON:0003528,2.16e-11,34;UBERON:0002020,2.16e-11,34;UBERON:0000073,3.10e-11,53;UBERON:0002616,3.10e-11,53;UBERON:0001017,3.19e-11,81;UBERON:0001893,4.14e-11,34;UBERON:0000955,8.23e-11,68;UBERON:0006238,8.23e-11,68;UBERON:0002780,1.98e-10,41;UBERON:0001890,1.98e-10,41;UBERON:0003080,1.98e-10,41;UBERON:0006240,1.98e-10,41;UBERON:0002791,3.33e-10,32;UBERON:0001016,4.27e-10,89;UBERON:0001869,5.86e-10,32;UBERON:0003075,7.65e-08,82;UBERON:0007284,7.65e-08,82;UBERON:0002385,2.83e-07,64;UBERON:0001015,2.83e-07,64;UBERON:0000383,2.83e-07,64;UBERON:0002420,3.35e-07,9;UBERON:0007245,3.35e-07,9;UBERON:0010009,3.35e-07,9;UBERON:0010011,3.35e-07,9;UBERON:0000454,3.35e-07,9;UBERON:0000125,5.61e-07,9;UBERON:0002308,5.61e-07,9;UBERON:0002346,7.21e-07,86 | |||
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| |||
|short_description=p7@ATP2B4 | |||
}} |
Latest revision as of 23:33, 19 September 2015
Short description: | p7@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ATP2B4_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000367218, ENST00000367219, ENST00000391954, uc001gzv.2, uc001gzw.2_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.34e-18 | 114 |
neural tube | 6.91e-13 | 56 |
neural rod | 6.91e-13 | 56 |
future spinal cord | 6.91e-13 | 56 |
neural keel | 6.91e-13 | 56 |
brain grey matter | 2.16e-11 | 34 |
gray matter | 2.16e-11 | 34 |
regional part of nervous system | 3.10e-11 | 53 |
regional part of brain | 3.10e-11 | 53 |
central nervous system | 3.19e-11 | 81 |
telencephalon | 4.14e-11 | 34 |
brain | 8.23e-11 | 68 |
future brain | 8.23e-11 | 68 |
regional part of forebrain | 1.98e-10 | 41 |
forebrain | 1.98e-10 | 41 |
anterior neural tube | 1.98e-10 | 41 |
future forebrain | 1.98e-10 | 41 |
regional part of telencephalon | 3.33e-10 | 32 |
nervous system | 4.27e-10 | 89 |
cerebral hemisphere | 5.86e-10 | 32 |
neural plate | 7.65e-08 | 82 |
presumptive neural plate | 7.65e-08 | 82 |
muscle tissue | 2.83e-07 | 64 |
musculature | 2.83e-07 | 64 |
musculature of body | 2.83e-07 | 64 |
basal ganglion | 3.35e-07 | 9 |
nuclear complex of neuraxis | 3.35e-07 | 9 |
aggregate regional part of brain | 3.35e-07 | 9 |
collection of basal ganglia | 3.35e-07 | 9 |
cerebral subcortex | 3.35e-07 | 9 |
neural nucleus | 5.61e-07 | 9 |
nucleus of brain | 5.61e-07 | 9 |
neurectoderm | 7.21e-07 | 86 |