FFCP PHASE1:Hg19::chr10:92617740..92617801,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3363 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5302 | |||
|TSSclassifier=strong | |||
|UniProt=P34969,Q5VX03 | |||
|association_with_transcript=-69bp_to_NM_000872,NM_019859,NM_019860,uc001kgz.2,uc001kha.2,uc001khb.2_5end | |||
|cluster_id=chr10:92617740..92617801,- | |||
|description=CAGE_peak_1_at_HTR7_5end | |||
|id=chr10:92617740..92617801,- | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-09!42;CL:0002194!5.18e-09!63;CL:0000576!5.18e-09!63;CL:0000040!5.18e-09!63;CL:0000559!5.18e-09!63;CL:0002009!1.72e-08!65;CL:0000860!3.04e-08!45;CL:0000557!4.25e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.54e-07,48;CL:0000234,1.54e-07,48;CL:0002194,2.60e-07,59;CL:0000576,2.60e-07,59;CL:0000040,2.60e-07,59;CL:0000559,2.60e-07,59;CL:0002159,3.15e-07,14;CL:0002009,8.48e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002050!1.03e-14!605;UBERON:0005423!1.03e-14!605;UBERON:0000922!1.07e-14!612;UBERON:0000923!1.30e-14!604;UBERON:0005291!1.30e-14!604;UBERON:0006598!1.30e-14!604;UBERON:0002532!1.30e-14!604;UBERON:0002204!1.71e-14!167;UBERON:0000468!1.18e-11!659;UBERON:0000033!1.31e-11!123;UBERON:0000467!1.56e-11!625;UBERON:0000480!2.47e-11!626;UBERON:0000153!1.48e-10!129;UBERON:0007811!1.48e-10!129;UBERON:0000914!8.87e-10!83;UBERON:0002329!8.87e-10!83;UBERON:0003077!8.87e-10!83;UBERON:0003059!8.87e-10!83;UBERON:0007282!8.87e-10!83;UBERON:0009618!8.87e-10!83;UBERON:0007285!8.87e-10!83;UBERON:0004121!1.61e-09!169;UBERON:0000062!1.82e-09!511;UBERON:0004765!2.58e-09!101;UBERON:0001434!2.58e-09!101;UBERON:0000924!1.66e-08!173;UBERON:0006601!1.66e-08!173;UBERON:0000486!2.41e-08!82;UBERON:0002371!3.91e-08!80;UBERON:0000481!1.72e-07!347;UBERON:0001474!4.16e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.39e-12,564;UBERON:0002204,3.55e-12,167;UBERON:0000923,2.24e-11,560;UBERON:0010316,2.24e-11,560;UBERON:0005291,2.24e-11,560;UBERON:0006598,2.24e-11,560;UBERON:0010317,2.24e-11,560;UBERON:0002532,2.24e-11,560;UBERON:0000922,8.34e-11,592;UBERON:0005423,9.97e-11,581;UBERON:0001434,6.53e-09,100;UBERON:0004765,7.80e-08,90;UBERON:0000486,2.58e-07,83;UBERON:0004121,9.04e-07,171;UBERON:0000924,9.04e-07,171;UBERON:0006601,9.04e-07,171 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0,0,0,1.48519623552056,2.31978163009541,1.34465029290355,0,1.46062018077475,0,0.738726348460727,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0.383829398097213,0.464448369948228,5.51652734687356,0.90361775633475,4.06729411183466,0,0,0.293600439334847,1.66198622559563,1.20326668482085,0.651032612147555,3.35873211359887,4.21061765824673,6.43938919085466,1.45398238779565,1.13362783106643,1.94067248950253,0.929716147622738,0,0.619412741790207,6.61692502340946,7.42866048934392,6.85798466676897,2.75796544589295,0.645484683583826,0,0.752969358170419,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,15.8328624089624,9.77371922345996,10.2293940127847,0.870627715885752,1.13477044938228,1.24564449799115,3.51748131359441,4.69334626578181,2.38907729175628,1.21079900526674,1.84138817993782,1.58231193720442,2.11255286311942,1.91343869968539,0.209658645508376,0.44931452458598,1.05123824989054,0.16072558669708,2.56511469367124,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,1.99556457716308,0.966182642624386,0.523916301990851,1.45718115317017,2.22470665670658,0,0,0,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,1.45650098894541,1.72101972449288,1.06400514659507,3.92474320099615,0,5.67335361359468,3.42332138939743,1.21239604862719,0.163461903113459,0.151357427644931,1.72852777344,1.64025002283658,0.312160076830321,1.1409436430889,0.747243402759005,3.05329696473789,1.13311061057692,1.12360645361799,1.02077085627447,2.57952066354713,0.723280468230358,0,0.989067717114227,0.910161361938026,0.718618141816238,2.18836948140286,1.25118519871964,1.6623846929051,0.438977620880838,1.5324389789951,3.45547535485173,0.340296549480063,0.358779271377724,0.640672166455702,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0.169560592310488,8.11695583285847,3.00020732649918,4.30206893083506,0.243947412259191,0,0.116193942869518,0.10366105501537,0.504641701751257,2.18986415445498,1.56449532329816,0.643240938192885,5.52539685409922,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,6.80451769533479,5.62008766288098,4.82539067575828,4.44424536760942,1.95484983186195,2.07986957055916,0,0.115930404975077,2.23076519048061,0,0,0,1.58040879591855,0,2.70838706696137,0.702012795417713,0.594524649154913,5.62403003920662,5.37542810236351,3.68615252830205,11.194815337856,10.7534557250166,5.75074018747817,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0.411309970813294,0,0.571652865261156,0.336393253036082,0,0.5867062865676,1.29271715757778,0,0,0,0,1.54324424557285,1.41849132023278,1.0656887160644,2.57360388584666,0,0.823240336780769,0.325736184293735,4.6200953336531,1.58390374586686,3.31583314765545,5.22920075160176,2.39935178836937,1.2162378064119,4.52031382288914,2.10833939483032,1.67737398844108,1.14861935834114,0,3.76431397335706,4.72595541865882,4.1184021545176,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0.500170521059677,2.71265023699736,0,0,0,0,0.601892199455438,2.27407504055985,0,1.32845119707087,3.31864503375066,0.0868836144680828,0.979005787313703,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0.9033987161519,1.55776328755086,0.348631135379878,0,2.80709058424599,6.35358823657685,0.34444334449382,1.27463817604702,0.786746489756545,0,0,0,0,0,0,0.170093705276516,1.94324324491925,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.103041011647722,0,0,4.01985876597321,1.95018073810956,0,1.83674364755032,0.308097234229289,0,0.964856007391714,0.644521469209642,1.16013355131383,0.511359764496605,0.0890320356467374,3.8015530533025,1.15314040419064,4.46644493731044,2.93357564481095,0.464845549297286,2.51849877464512,2.0911118104818,0.924100740528266,0,0,1.11194531462352,1.5743737541619,0,0.316379424718726,0.762520775695299,0.255897791311334,1.28381696410176,1.27281299170375,1.56989728039846,1.97859703341646,0.823611089208164,2.35624804691373,1.01091240786658,4.75530963519025,1.26377536871694,3.90106991271672,0.243713489631284,0,0.136499911407986,1.27264888758341,2.26016233240486,0.551365343546124,1.99031692572366,0.876901770507525,0.578775534266688,1.31178950409327,1.82619339266434,1.8589409885985,3.09865162785466,1.29070216983646,0.491245205065606,0.7133421029625,0,0,0,2.27683904259429,0.699869440489966,4.23377295992253,2.68120910214315,1.08890984861323,0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| |||
|short_description=p1@HTR7 | |||
}} |
Latest revision as of 23:20, 19 September 2015
Short description: | p1@HTR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTR7_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_NM_000872, NM_019859, NM_019860, uc001kgz.2, uc001kha.2, uc001khb.2_5end |
EntrezGene: | HTR7 |
HGNC: | 5302 |
UniProt: | P34969Q5VX03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.54e-07 | 48 |
phagocyte | 1.54e-07 | 48 |
monopoietic cell | 2.60e-07 | 59 |
monocyte | 2.60e-07 | 59 |
monoblast | 2.60e-07 | 59 |
promonocyte | 2.60e-07 | 59 |
general ecto-epithelial cell | 3.15e-07 | 14 |
macrophage dendritic cell progenitor | 8.48e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.39e-12 | 564 |
musculoskeletal system | 3.55e-12 | 167 |
germ layer | 2.24e-11 | 560 |
germ layer / neural crest | 2.24e-11 | 560 |
embryonic tissue | 2.24e-11 | 560 |
presumptive structure | 2.24e-11 | 560 |
germ layer / neural crest derived structure | 2.24e-11 | 560 |
epiblast (generic) | 2.24e-11 | 560 |
embryo | 8.34e-11 | 592 |
developing anatomical structure | 9.97e-11 | 581 |
skeletal system | 6.53e-09 | 100 |
skeletal element | 7.80e-08 | 90 |
multilaminar epithelium | 2.58e-07 | 83 |
ectoderm-derived structure | 9.04e-07 | 171 |
ectoderm | 9.04e-07 | 171 |
presumptive ectoderm | 9.04e-07 | 171 |