FFCP PHASE1:Hg19::chr7:91687055..91687071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10142 | |EntrezGene=10142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=379 | |HGNC=379 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=115bp_to_ENST00000491695_5end | |||
|cluster_id=chr7:91687055..91687071,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_19_at_AKAP9_5end | |||
|id=chr7:91687055..91687071,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.36e-15;1!UBERON:0005425;1.97e-14;1!UBERON:0008947;1.41e-11;29!UBERON:0010122;5.01e-08;2!UBERON:0007297;7.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;1.97e-14;1!DOID:326;1.97e-14;1!DOID:3978;1.97e-14;1!DOID:3394;1.97e-14;1!DOID:5844;1.97e-14;1!DOID:114;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.75e-14,1;DOID:326,2.75e-14,1;DOID:3978,2.75e-14,1;DOID:3394,2.75e-14,1;DOID:5844,2.75e-14,1;DOID:114,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-13!115;UBERON:0002298!5.74e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.40e-27;2!UBERON:0000341;4.67e-27;2!UBERON:0002171;9.36e-15;1!UBERON:0006518;9.36e-15;1!UBERON:0008949;9.36e-15;1!UBERON:0000101;9.36e-15;1!UBERON:0002167;9.36e-15;1!UBERON:0000941;1.97e-14;1!UBERON:0001301;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0000974;1.10e-09;6!UBERON:0003126;1.42e-08;7!UBERON:0001005;1.42e-08;7!UBERON:0001873;5.01e-08;2!UBERON:0005178;5.55e-08;34!UBERON:0002224;5.55e-08;34!UBERON:0001897;7.27e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0010225;7.27e-08;2!UBERON:0005181;6.29e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.60e-27,2;UBERON:0000341,2.74e-27,2;UBERON:0002171,1.07e-14,1;UBERON:0006518,1.07e-14,1;UBERON:0008949,1.07e-14,1;UBERON:0000101,1.07e-14,1;UBERON:0002167,1.07e-14,1;UBERON:0001301,1.61e-14,1;UBERON:0000941,2.11e-14,1;UBERON:0001785,2.11e-14,1;UBERON:0002464,2.11e-14,1;UBERON:0004904,2.11e-14,1;UBERON:0001021,2.11e-14,1;UBERON:0003902,2.11e-14,1;UBERON:0005425,2.11e-14,1;UBERON:0007023,1.58e-10,114;UBERON:0005178,7.50e-10,34;UBERON:0002224,7.50e-10,34;UBERON:0005181,1.44e-09,35;UBERON:0008947,8.30e-09,38;UBERON:0003258,8.30e-09,38;UBERON:0003126,1.47e-08,7;UBERON:0001005,1.47e-08,7;UBERON:0001873,4.69e-08,2;UBERON:0010122,4.69e-08,2;UBERON:0001897,6.15e-08,2;UBERON:0010225,6.15e-08,2;UBERON:0003714,7.52e-08,2;UBERON:0005162,7.52e-08,2;UBERON:0000122,7.52e-08,2;UBERON:0005103,1.88e-07,8;UBERON:0000083,1.88e-07,8;UBERON:0009201,1.88e-07,8;UBERON:0006553,1.88e-07,8;UBERON:0003074,1.88e-07,8;UBERON:0003060,1.88e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0,0.383010740264733,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0.173624994933292,2.65722415744152,0.361789315876224,0,0,0,0.438770794307945,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,3.52398461473392,7.8602152549833,2.07119527673598,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,4.0138643698305,0.998361463831671,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0.690359926060101,0,0.752103283492572,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0.428859265059938,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.237840181555137,0.11294608203896,0.109940516745429,0,0.308696632431779,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,1.65833887891756,0,1.49263787330687,1.66645102024618,0,0,0,0,0.404234377916439,0,0,0.134704106029175,4.01644350198988,1.33064142618405,0,0,0,0.0898252021065869,2.34640942403454,0,0.406896178315738,0,0,0 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| ||
|short_description=p19@AKAP9 | |||
}} | }} |
Latest revision as of 23:18, 19 September 2015
Short description: | p19@AKAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_AKAP9_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 115bp_to_ENST00000491695_5end |
EntrezGene: | AKAP9 |
HGNC: | 379 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.60e-27 | 2 |
throat | 2.74e-27 | 2 |
lower lobe of right lung | 1.07e-14 | 1 |
right lung lobe | 1.07e-14 | 1 |
lower lobe of lung | 1.07e-14 | 1 |
lobe of lung | 1.07e-14 | 1 |
right lung | 1.07e-14 | 1 |
epididymis | 1.61e-14 | 1 |
cranial nerve II | 2.11e-14 | 1 |
cranial nerve | 2.11e-14 | 1 |
nerve trunk | 2.11e-14 | 1 |
nerve connecting eye with brain | 2.11e-14 | 1 |
nerve | 2.11e-14 | 1 |
retinal neural layer | 2.11e-14 | 1 |
presumptive neural retina | 2.11e-14 | 1 |
adult organism | 1.58e-10 | 114 |
thoracic cavity element | 7.50e-10 | 34 |
thoracic cavity | 7.50e-10 | 34 |
thoracic segment organ | 1.44e-09 | 35 |
respiratory primordium | 8.30e-09 | 38 |
endoderm of foregut | 8.30e-09 | 38 |
trachea | 1.47e-08 | 7 |
respiratory airway | 1.47e-08 | 7 |
caudate nucleus | 4.69e-08 | 2 |
future caudate nucleus | 4.69e-08 | 2 |
dorsal plus ventral thalamus | 6.15e-08 | 2 |
thalamic complex | 6.15e-08 | 2 |
neural tissue | 7.52e-08 | 2 |
multi cell component structure | 7.52e-08 | 2 |
neuron projection bundle | 7.52e-08 | 2 |
mesonephric epithelium | 1.88e-07 | 8 |
mesonephric tubule | 1.88e-07 | 8 |
nephric duct | 1.88e-07 | 8 |
renal duct | 1.88e-07 | 8 |
mesonephric duct | 1.88e-07 | 8 |
pronephric duct | 1.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.75e-14 | 1 |
ischemia | 2.75e-14 | 1 |
extrinsic cardiomyopathy | 2.75e-14 | 1 |
myocardial ischemia | 2.75e-14 | 1 |
myocardial infarction | 2.75e-14 | 1 |
heart disease | 8.60e-08 | 2 |