FFCP PHASE1:Hg19::chr18:55862630..55862711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23327 | |EntrezGene=23327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |HGNC=7728 | ||
|TSSclassifier=strong | |||
|UniProt=Q3LSM7 | |UniProt=Q3LSM7 | ||
|association_with_transcript=0bp_to_ENST00000456173,uc002lhf.2_5end | |association_with_transcript=0bp_to_ENST00000456173,uc002lhf.2_5end | ||
|cluster_id=chr18:55862630..55862711,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NEDD4L_5end | |description=CAGE_peak_2_at_NEDD4L_5end | ||
|id=chr18:55862630..55862711,+ | |id=chr18:55862630..55862711,+ | ||
|ontology_enrichment_celltype=CL:0002077!2.57e-07!33 | |ontology_enrichment_celltype=CL:0002077!2.57e-07!33 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,7.09e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-19!57;UBERON:0005068!1.20e-19!57;UBERON:0006241!1.20e-19!57;UBERON:0007135!1.20e-19!57;UBERON:0003080!1.13e-18!42;UBERON:0002780!1.25e-18!41;UBERON:0001890!1.25e-18!41;UBERON:0006240!1.25e-18!41;UBERON:0001869!3.57e-17!32;UBERON:0002616!5.49e-17!59;UBERON:0001893!1.75e-16!34;UBERON:0007023!2.36e-16!115;UBERON:0002020!7.33e-16!34;UBERON:0003528!7.33e-16!34;UBERON:0002791!7.97e-16!33;UBERON:0002619!1.03e-14!22;UBERON:0001017!3.04e-14!82;UBERON:0003056!1.10e-13!61;UBERON:0001950!1.35e-13!20;UBERON:0005743!1.83e-13!86;UBERON:0003075!1.87e-13!86;UBERON:0007284!1.87e-13!86;UBERON:0000955!3.71e-13!69;UBERON:0006238!3.71e-13!69;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0000033!1.40e-12!123;UBERON:0004111!1.77e-12!241;UBERON:0000153!3.03e-12!129;UBERON:0007811!3.03e-12!129;UBERON:0002346!6.83e-12!90;UBERON:0004121!1.27e-11!169;UBERON:0000073!1.05e-10!94;UBERON:0001016!1.05e-10!94;UBERON:0000924!1.15e-10!173;UBERON:0006601!1.15e-10!173;UBERON:0000025!6.79e-10!194;UBERON:0000477!1.69e-09!286;UBERON:0000064!2.77e-08!219;UBERON:0000483!2.31e-07!309;UBERON:0000119!5.77e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.06e-17;32!UBERON:0002619;1.15e-16;22!UBERON:0001893;3.20e-16;34!UBERON:0002791;5.77e-16;32!UBERON:0003528;2.10e-15;34!UBERON:0002020;2.10e-15;34!UBERON:0001950;2.27e-15;20!UBERON:0002780;4.40e-15;41!UBERON:0001890;4.40e-15;41!UBERON:0000956;3.91e-14;25!UBERON:0000203;3.91e-14;25!UBERON:0000073;1.59e-12;53!UBERON:0002616;1.59e-12;53!UBERON:0000955;5.09e-08;68!UBERON:0001017;2.59e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.60e-22,53;UBERON:0002616,3.60e-22,53;UBERON:0001049,1.64e-21,56;UBERON:0005068,1.64e-21,56;UBERON:0006241,1.64e-21,56;UBERON:0007135,1.64e-21,56;UBERON:0002780,1.34e-20,41;UBERON:0001890,1.34e-20,41;UBERON:0003080,1.34e-20,41;UBERON:0006240,1.34e-20,41;UBERON:0001869,3.53e-19,32;UBERON:0001893,4.00e-18,34;UBERON:0003528,2.02e-17,34;UBERON:0002020,2.02e-17,34;UBERON:0002791,2.33e-17,32;UBERON:0002619,1.21e-16,22;UBERON:0001017,6.47e-16,81;UBERON:0010371,1.06e-15,104;UBERON:0001950,2.31e-15,20;UBERON:0000955,3.92e-15,68;UBERON:0006238,3.92e-15,68;UBERON:0007023,2.18e-14,114;UBERON:0000956,5.47e-14,25;UBERON:0000203,5.47e-14,25;UBERON:0003056,6.74e-14,61;UBERON:0003075,8.41e-14,82;UBERON:0007284,8.41e-14,82;UBERON:0001016,1.59e-13,89;UBERON:0004111,3.84e-13,240;UBERON:0002346,1.65e-12,86;UBERON:0000025,2.81e-11,192;UBERON:0004121,8.95e-11,171;UBERON:0000924,8.95e-11,171;UBERON:0006601,8.95e-11,171;UBERON:0010314,1.38e-08,132 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,7.37201809504527,4.88460817580699,4.15038607047327,3.4289707169699,0.37129905888014,0.331397375727916,1.34465029290355,1.80808358407193,0,0.487932798790507,1.10808952269109,1.42800483870977,0,0,1.09499540058307,0.627713197974014,9.0931952840062,6.15754420874593,6.53299484903538,1.57345710739562,0.383829398097213,1.39334510984468,2.75826367343678,6.6265302131215,1.84877005083394,0,1.27952309238679,0,0.553995408531877,1.80490002723128,1.51907609501096,0.223915474239924,0.647787332037959,0.257575567634187,0,1.51150377475524,0.970336244751265,0.929716147622738,3.28934310417461,1.54853185447552,0.575384784644301,0.256160706529101,0.945928919554341,1.03423704220986,4.51839278508678,2.70852973188684,0.752969358170419,2.45615535052061,1.57306439111559,0.306083892370903,4.8139354061414,3.19668562899521,0,0.199463657621632,0.426224750532694,1.7412554317715,3.40431134814684,4.9825779919646,0.502497330513487,0.521482918420201,1.08594422352558,3.02699751316684,4.41933163185078,4.1140110367315,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,3.52342313622563,6.11637165000366,0,1.12101712596307,0,3.14735632182133,6.28817220398664,6.99045096598331,1.83905144929746,3.91106719960308,2.8406868344084,0,1.11410456885174,15.3195071886915,20.6026521962768,5.41607727530031,3.5865569523189,1.30059347559878,0,0,0,5.19002971067211,5.88589821797369,1.04535523804977,1.24640276967323,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0,0,2.25862678616659,1.91979916731628,0,0.947109008176067,2.46338399076314,1.00803371612366,1.06976078313403,2.02754165435919,0,1.34140171940727,0.511450247374121,3.2529523714611,2.50668955317945,1.44846518960824,0.795285947051099,0.486634870302636,1.89069634328136,2.4390233720882,0.790513071238134,9.23402482258874,5.10013403609559,4.44941331341315,9.41187441598582,6.09454080547435,6.1160661838678,0,0,0,3.57772333260069,1.72046919021225,3.81854551768354,2.26123176769604,0,1.37559020970034,4.17989933073621,8.78616981175718,11.7402866686614,10.7110596084694,24.1697590265488,10.6438094800592,26.8468263302986,6.61793544622564,2.43042584364528,4.73288559905623,3.81699933464489,4.61707069981621,0,0.949265659568129,0.366403487860815,0,7.75560528296651,3.05265836499774,0,0.506522046658319,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0.605429710579726,0,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0,0.842704840213491,0.61246251376468,1.10550885580591,0.309977343527296,3.56400857184616,0,0,0,0.168336113954066,0.875829639103749,0.831192346452549,0.438977620880838,0.919463387397059,0.45071417671979,0.680593098960126,5.56107870635472,0.213557388818567,0.211931901159562,1.50045548042201,0.824420233907511,1.28820270022815,0.558350568994769,1.18143432568886,0.389748020644795,1.26216887122057,0.644349290496095,0.323292113637624,4.26011511019937,2.61955455391865,1.18692414617341,8.50347753918506,6.81865301477087,17.4950803187292,6.95250124938694,3.31324420803713,3.137236457477,3.00617059544574,3.02785021050754,3.28479623168247,4.69348596989448,1.28648187638577,4.14404764057442,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0.4115740113314,0,0,0,1.18157981336281,0,0,1.20097467208968,6.91426798074341,3.37205259772859,6.53438320675601,6.20342582562148,0,0,4.3299402607582,1.04337364477569,0.587043471179108,20.6444020298336,21.7603190911007,16.7423653966446,0.790204397959275,0,0,6.78612368903789,1.33768046059855,7.49870671894216,4.70349958956807,12.1926583628452,1.97028749946266,4.06887513919547,11.1180976957911,0.492663237895943,0.264145302039678,0,0,0.37872730027914,1.0159663086747,6.875791660049,8.20522130470329,1.71072446022705,6.78661451841935,1.50171528921959,5.14487578735041,0.112131084345361,0,0.07333828582095,1.42198887333556,3.57656445851882,0,2.92531928243358,1.04007436911366,1.28603687131071,0,1.0656887160644,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.904318131178758,2.61460037580088,0.899756920638513,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0,0.358121926479791,1.34502172792233,1.37921532141349,1.50939302401662,0.385029108839245,0.508189248444927,0,1.54657762555539,1.00509759200609,1.27587750330633,0,0,0,0,0,0,8.94274704582471,4.10386674233472,2.83864347061082,6.79420206957737,1.20378439891088,0,0,0.664225598535437,1.65932251687533,2.78027566297865,0,0,1.6541442089831,2.15714200818617,1.17400313583789,0.909382714338778,3.32870879020994,1.20956117331872,0.248107807818777,0.306923946576125,0.561320188866147,0,0,0,0,0,0,0.328508624055237,0,0.348631135379878,0,5.41367469818869,0.368323955743585,0.459257792658427,1.45672934405374,0.524497659837696,5.41439535488894,4.1588282036384,3.13739907670742,1.46139224653261,4.43316841350078,18.1973414513435,5.61309227412502,3.45465465763423,3.08454505380579,2.16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|short_description=p2@NEDD4L | |short_description=p2@NEDD4L | ||
}} | }} |
Latest revision as of 23:16, 19 September 2015
Short description: | p2@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEDD4L_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000456173, uc002lhf.2_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | Q3LSM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 7.09e-07 | 34 |