FFCP PHASE1:Hg19::chr6:82462935..82462946,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IP4 | |||
|association_with_transcript=-444bp_to_ENST00000369756_5end | |||
|cluster_id=chr6:82462935..82462946,- | |||
|description=CAGE_peak_18_at_FAM46A_5end | |||
|id=chr6:82462935..82462946,- | |||
|ontology_enrichment_celltype=CL:0002057!6.87e-31!42;CL:0000860!1.12e-30!45;CL:0000766!7.21e-29!76;CL:0000839!8.53e-28!70;CL:0000557!2.80e-27!71;CL:0002194!4.80e-25!63;CL:0000576!4.80e-25!63;CL:0000040!4.80e-25!63;CL:0000559!4.80e-25!63;CL:0002009!4.98e-24!65;CL:0000763!2.60e-20!112;CL:0000049!2.60e-20!112;CL:0002393!1.03e-16!9;CL:0002397!1.03e-16!9;CL:0000738!2.33e-16!140;CL:0002031!4.41e-16!124;CL:0002032!3.89e-14!165;CL:0000837!3.89e-14!165;CL:0002087!1.84e-13!119;CL:0000037!3.94e-13!172;CL:0000566!3.94e-13!172;CL:0000988!7.75e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.17e-21;5!CL:0000771;7.77e-14;2!CL:0000163;3.85e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-21,5;CL:0002028,4.92e-21,5;CL:0000771,8.28e-14,2;CL:0000766,2.38e-12,72;CL:0000163,3.74e-12,9;CL:0000839,1.69e-09,66;CL:0000557,2.31e-09,67;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.60e-09;3!UBERON:0003057;1.60e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.65e-25!80;UBERON:0001474!1.58e-22!86;UBERON:0002390!3.42e-20!102;UBERON:0003061!3.42e-20!102;UBERON:0002405!3.33e-19!115;UBERON:0002193!1.03e-18!112;UBERON:0004765!7.74e-18!101;UBERON:0001434!7.74e-18!101;UBERON:0003081!4.72e-09!216;UBERON:0002204!7.69e-09!167;UBERON:0007023!1.34e-08!115;UBERON:0003978!2.62e-08!3;UBERON:0009751!2.62e-08!3;UBERON:0000946!2.62e-08!3;UBERON:0002523!2.62e-08!3;UBERON:0005983!2.62e-08!3;UBERON:0002165!2.62e-08!3;UBERON:0002062!2.62e-08!3;UBERON:0007280!2.62e-08!3;UBERON:0000062!4.92e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;4.61e-26;1!UBERON:0002240;1.60e-09;3!UBERON:0005174;1.60e-09;3!UBERON:0001137;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,4.61e-26,1;UBERON:0002240,1.67e-09,3;UBERON:0005174,1.67e-09,3;UBERON:0001137,1.67e-09,3;UBERON:0002371,2.73e-08,76;UBERON:0001474,1.06e-07,82;UBERON:0004765,4.89e-07,90;UBERON:0002405,8.13e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0.619412741790207,0,0.768482119587302,0,0.689491361473237,0,0,0.188242339542605,0,0,1.53041946185451,0.641858054152187,0,0.329851300186716,0.398927315243264,0,0.290209238628584,1.13477044938228,0,0.502497330513487,0,0.868755378820466,0,0,0.949387162322653,0.422510572623884,0.850417199860174,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,0.576479813667846,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,2.66302709674205,0,0 | |||
|short_description=p18@FAM46A | |||
}} |
Latest revision as of 23:15, 19 September 2015
Short description: | p18@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FAM46A_5end |
Coexpression cluster: | NA |
Association with transcript: | -444bp_to_ENST00000369756_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | Q96IP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-21 | 5 |
basophil mast progenitor cell | 4.92e-21 | 5 |
eosinophil | 8.28e-14 | 2 |
myeloid leukocyte | 2.38e-12 | 72 |
endocrine cell | 3.74e-12 | 9 |
myeloid lineage restricted progenitor cell | 1.69e-09 | 66 |
granulocyte monocyte progenitor cell | 2.31e-09 | 67 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
vagina | 4.61e-26 | 1 |
spinal cord | 1.67e-09 | 3 |
dorsal region element | 1.67e-09 | 3 |
dorsum | 1.67e-09 | 3 |
bone marrow | 2.73e-08 | 76 |
bone element | 1.06e-07 | 82 |
skeletal element | 4.89e-07 | 90 |
immune system | 8.13e-07 | 93 |