FFCP PHASE1:Hg19::chr12:6619381..6619395,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32567 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000459255,NR_004387,uc009zeo.1_5end | |||
|cluster_id=chr12:6619381..6619395,+ | |||
|coexpression_cluster_id=C673 | |||
|description=CAGE_peak_1_at_SCARNA10_5end | |||
|id=chr12:6619381..6619395,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.45e-14!140;CL:0002087!3.30e-13!119;CL:0002057!1.63e-12!42;CL:0000860!8.20e-12!45;CL:0002031!1.18e-11!124;CL:0000037!8.63e-10!172;CL:0000566!8.63e-10!172;CL:0002032!5.85e-09!165;CL:0000837!5.85e-09!165;CL:0000988!6.84e-09!182;CL:0002009!2.09e-08!65;CL:0002194!8.55e-08!63;CL:0000576!8.55e-08!63;CL:0000040!8.55e-08!63;CL:0000559!8.55e-08!63;CL:0000766!1.44e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-09;33!CL:0002057;1.52e-09;33!CL:0000473;3.67e-07;39!CL:0000234;3.67e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.81e-14,136;CL:0002087,7.63e-13,115;CL:0000860,2.41e-12,42;CL:0002057,2.41e-12,42;CL:0002031,2.44e-11,120;CL:0000473,4.69e-11,48;CL:0000234,4.69e-11,48;CL:0000037,1.75e-09,168;CL:0002032,1.19e-08,161;CL:0000837,1.19e-08,161;CL:0000988,1.31e-08,177;CL:0002009,1.94e-08,61;CL:0002194,8.32e-08,59;CL:0000576,8.32e-08,59;CL:0000040,8.32e-08,59;CL:0000559,8.32e-08,59;CL:0000766,1.34e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-07!102;UBERON:0003061!3.82e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.68e-07,98;UBERON:0003061,4.68e-07,98 | |||
|phase1_expression=0.908391896352783,2.14100523890983,0.986680828671798,11.0080628188443,2.68176656656373,11.3404008133048,20.2639902534648,0,3.13422753839806,0,9.07141518364156,2.18441372130172,1.84636884759917,0.37129905888014,6.2965501388304,4.03395087871065,1.80808358407193,1.46062018077475,1.46379839637152,0.861847406537515,3.4680117511523,6.26909442956176,0.572471974262113,3.69560947696787,3.64073654824928,1.06978768047132,0.985207073399349,0.629686250509434,5.50709987588466,1.91914699048606,2.63187409637329,5.51652734687356,1.8072355126695,4.43704812200145,1.00707360754392,1.9903692548239,2.05520307534393,4.43196326825502,8.82395568868623,14.5397283379621,2.46307021663917,0.971680998056939,0.77272670290256,6.25212426752128,5.66813915533214,7.03493777444667,8.36744532860465,7.81218987241469,7.12324653058738,11.7953880852082,9.73410684810582,13.2430048737608,12.0660988257816,6.45484683583826,6.77132432971709,10.3533286748433,5.73102915121476,6.96642801779762,8.57034898638527,0.962787081228281,15.983428144976,10.5552416059749,5.58498241340569,5.11469700639233,16.5419266018293,8.5107783703671,9.34233373493363,19.8486445552827,22.9452484104889,8.25317609879443,13.9241885605675,7.73383035573886,15.1901945971625,3.80259515361495,5.95292039902122,11.1119082119439,0.898629049171961,3.75442232103766,3.53596290733576,1.99508920618874,4.17725022118089,9.49853599576097,15.839662001519,10.3766336139805,10.6741110463627,14.0820973446947,9.20910770182829,9.19603903927173,3.30522436392431,17.1729675816366,33.5835651774575,28.774622279176,20.6427543187624,25.1125524300149,6.72610275577843,2.10707267820062,7.86839080455332,194.540327560837,21.382555895949,1.17030546773475,1.62961133316795,17.5175688121851,58.4480185223734,0.891283655081389,3.53527088969805,12.1843642020992,15.7066240983709,7.30120522436348,8.84403563407172,12.8261565590867,15.1992509782217,2.02862160014537,2.22429844743091,8.56130649887082,37.6327885697916,0.906474741580529,0.766440987203842,7.55980380061786,14.6751421371312,9.2383970153988,9.11516835398986,18.0585888445191,3.01150238155546,4.47953139040464,4.99722906209383,4.97232229292435,13.1380479507367,4.03213486449465,42.5229911295777,26.9373391222006,24.3806866313962,7.37770945674,0.383587685530591,2.53007406669196,3.50936537445123,5.35932120155048,0,7.29952305453954,1.32348744029695,2.88248216701333,1.75669571386252,0.458426764241994,0.364295288292542,1.11235332835329,2.27183175558278,0.870648686496336,3.72282289452822,7.63169997777094,4.0039643754609,2.60020250930695,0.79504962946682,3.4409383804245,0.347140501607594,1.69592382577203,1.67799774483962,2.75118041940067,1.46296476575767,0.775250277507987,0,0,0,0.760272105718513,3.1728067481262,0,1.62028389576352,0.446498641420399,1.57170560838319,1.23872628531654,9.19899824795299,2.84779697870439,0.732806975721629,5.27121669744253,7.75560528296651,0,1.98788780678127,0.25326102332916,1.32409180813219,4.87622255272983,1.06400514659507,3.36406560085384,2.1349799145941,3.45334567784024,0,0.942974704487816,0.653847612453835,0.908144565869588,5.76175924479999,0.70296429550139,0.936480230490962,0,2.39117888882882,0.587172493218824,1.45685649931318,0.561803226808994,0.408308342509787,1.10550885580591,0.206651562351531,0,3.21447008062124,0,2.15585442544872,0,0.750711119231785,0,1.31693286264251,4.59731693698529,1.80285670687916,0.680593098960126,3.7671823494661,1.49490172172997,0.635795703478686,8.10245959427886,0.309157587715317,4.12224864073007,0.558350568994769,1.35021065793013,0.194874010322397,3.02920529092937,0.368199594569197,1.13152239773168,4.61512470271599,0.906768884048762,0.847802961552438,0.773043412653187,0.545492241181669,0,0.853815942907168,0.265059536642971,1.39432731443422,0.725627385107593,1.7662459561294,2.18986415445498,1.56449532329816,11.5783368874719,4.14404764057442,3.71494342425583,2.88751792667834,1.77460200059766,1.34867752062481,0.964044119533928,1.43382164552112,1.08939722046203,0.71181185733329,2.29213223872279,1.37355025587742,0.38474715694639,2.95262181849859,1.40241773803446,0,11.7606969108434,17.7457048750563,5.89696330006576,10.6342183202653,27.3707121637083,1.47586126251736,0.514703430895577,0.219500570817251,3.37205259772859,0.402115889646523,0.185176890317059,0.325808305310325,4.15973914111831,2.88662684050547,0,0.117408694235822,0.721832238805369,2.31492756288305,4.37584550139576,23.7061319387783,30.0470156733205,0.492434012174795,0.234004265139238,0.891786973732369,0,0.16798212819886,0.141775097242386,0.447792613514241,2.03443756959773,5.36735750831296,0.492663237895943,1.76096868026452,0.207328115540772,1.15295962733569,0.37872730027914,0.952468414382536,1.14596527667483,0,8.55362230113526,2.05654985406647,3.60411669412701,0.571652865261156,0.224262168690721,1.30788020649984,0.1466765716419,0.387815147273333,0,8.45302752556,0,4.16029747645464,1.02882949704857,5.67396528093113,2.66422179016099,1.00084595560703,5.42621605391443,3.29296134712308,0.977208552881205,0.355391948742546,1.58390374586686,0.602878754119172,0,2.29937879718731,12.162378064119,4.01805673145701,31.6250909224547,0.479249710983165,2.29723871668228,1.42636905040718,0.144781306667579,1.64381058040307,0.179060963239896,5.49217205568284,5.71389204585589,37.950453175275,34.5242767592523,0,0,20.1055091322201,2.51274398001523,12.1208362814101,63.6655970355105,209.413021442817,10.7748033493369,1.10422342547226,1.50051156317903,4.6115054028955,1.24782516918484,3.21172179834891,2.20783381047509,1.87426263988341,1.80567659836631,15.9185252839189,33.1113828136016,0,3.31864503375066,0.521301686808497,1.37060810223918,8.92172901908225,2.89475236572042,7.33428282783297,8.75165973988244,5.15316871458641,9.98612637062982,8.76931850656073,0.744323423456331,0.767309866440312,1.96462066103151,0.128139149255701,1.53512174720011,2.41280881715411,5.93672265779964,1.07946785661859,1.42049380250502,0.492762936082855,0.519254429183621,0.697262270759755,1.20859449591622,0.802025881213139,1.28913384510255,0.803701137152247,2.36718518408732,2.09799063935079,0.451199612907412,0.231046011313244,2.35304930753057,11.6911379722609,0.73886140225013,0,2.2112181685947,1.72732732881711,3.08454505380579,0,7.5253466078228,0.254876273045038,0,1.79099803777743,2.41185864310528,4.44440266742331,0.769350375349168,0.984043937099117,1.30151357865721,2.98818933778395,2.1060976908219,1.32015199872941,0,2.60024098414608,0,1.54673149267395,1.69453478826109,2.30255512089194,1.24052915236078,1.28904293841928,2.17525040871343,0.93749290157711,0.801288320820636,0,0.960950336825531,1.40373983744043,2.52894452138875,0,3.46293581513704,2.7881490806424,2.15623506123262,1.59691809095107,0.869932992075073,0.9266210955196,0.858749320451947,1.116475108079,0,1.71567174531442,1.02359116524534,4.2793898803392,1.27281299170375,25.9033051265746,0.899362287916574,0.54907405947211,0.942499218765491,0.404364963146632,7.92551605865041,4.21258456238981,1.95053495635836,0.243713489631284,12.6780176108107,0.682499557039929,1.27264888758341,6.78048699721457,1.65409603063837,1.99031692572366,3.5076070820301,0.578775534266688,2.62357900818653,0.608731130888112,4.3375289733965,6.76069446077379,0.573645408816206,1.08073945114433,0,2.12856638442359,5.06658324714394,5.92730807327823,0.379473173765715,1.74967360122491,0.769776901804097,9.38423185750102,13.0669181833587,3.10674542563371,1.29151611801369,6.73885902670502,3.10401107475673,0,9.13405696617905,10.7049208999933,22.2162402997923,7.86164859010704,10.6954191002411,5.18778648954174,10.8006287447623,20.621254583651,1.38871292465715,0,1.47024129588619,1.67222857613147,1.44269212976445,0.711418433484141,1.91311527274587,2.79411120005943,0.957526850661834,2.32840940996271,0.324621940274555,1.12318871245384,3.65175486453108,2.19351854082233,5.01268954180134,2.70866844482565,2.56940920165919,5.85219150854038,2.55507742614196,1.71752672377882,1.22896305723383,0.223676107892416,0.500547425135725,1.17232857241224,2.22724939116194,1.23087398947712,1.35227839237992,1.6653598399891,1.4098700508785,3.18138918693974,2.78365540616599,1.33496573924465,0.445773537109913,7.10340367016033,4.7748896947538,3.8605408508243,12.5935887860685,0,2.39138007897872,0.556543525114529,2.30725423917463,4.01138275443188,1.19548792950642,2.76283915531148,4.03092396566842,1.53403023753232,0.246169610922139,0.622079175323615,0.629078458031288,1.9692329214317,4.60415133204185,5.22810049875748,98.1880678622453,0,0.969332746095218,3.33965153382665,0,2.60427761085233,1.39935999993913,2.89999830173917,2.38966241399549,4.06805840468426,4.25497827182285,7.92909758455369,2.62444152044929,9.72299971626437,1.77148277162768,4.5826646677655,4.5774520895125,2.21158519862449,1.18219047581419,6.14279112031123,0.762569244632931,1.81250867562184,2.77020930613669,2.27884111694002,3.4584585658209,2.2439411102443,4.78048436456836,8.61303131276183,0.366390373607449,32.5151213371367,42.9211852422093,1.56980256395025,2.16075186470203,0.451191321234361,1.17637520590644,0.335643173951685,0.569261198172555,0.476809736941136,10.1279070973453,3.10142335502381,0.848118428603645,0.432777279484182,0.995261931078505,2.38835424159016,7.33236173920351,2.07564790076435,0.988511511572023,1.35748534357092,0.337005664903385,28.0902176554576,5.3880822516828,8.0280107254893,1.36965233252463,1.21390189767046,11.0483632797829,8.46935012340647,4.28501866282686,0,1.35291077473043,0.311064574191741,1.32930774541437,10.591742588016,3.13932918407225,3.58417289318877,1.13843818411917,4.02156551738102,3.12407529003236,0.685946781900644,0.34823682632161,4.01871336956669,1.54787429224455,3.77349692027432,1.16942907337897,2.6276946257027,2.71569246167574,0.176512253383001,11.9769792613682,0.959293472527256,3.17943378724783,0.0633107959558787,3.12882212375685,0.721429382263803,4.0556069000477,6.79352672579243,8.78951544640046,0.229073192331831,15.9583348011627,2.44893156579854,0.869767748958028,8.95637331543823,0.271808412147228,0.313808538937,0.713987523454252,0,6.00420288709789,3.69644523008381,0,4.29765441419957,4.46908502274835,4.18923601908381,5.49985017628041,4.30723814746088,2.59582700648688,0.429226048136571,4.24025769139558,0.53746777989381,1.80149941771202,2.32991899054908,1.18174773460835,1.2362378757175,1.01105315781277,0.688992370603241,0.931406652723629,0.795229689809303,4.494712401682,2.73280352390533,1.92555211236127,3.32352270423348,4.94942561413301,53.3923348644985,0.121499113316049,4.36065093879046,2.83700546277113,0.629455057619977,2.21760706690754,7.70935559131233,4.60596473566669,7.86164859010704,3.97255182219259,0.5085370753095,2.71499800876856,2.5926644736038,2.28611152076586,2.39460383124975,1.23138781124008,3.9189245010647,2.37955392192264,2.63794020620548,1.32506888912221,4.65418642901582,9.12404952024561,0.171086837884329,0,4.37828391527548,4.71612915298998,6.62782488555513,21.3351389379139,11.6590862819787,0.60896299190448,1.27668251554036,1.08803560673895,0.7520696820681,0,0,1.25643277000187,1.77213635993397,4.6369980662746,4.13130071331449,3.44045517414043,3.54972964917927,0.0620964029413835,4.01211041315069,1.74972571146949,0.303298235083296,2.56918800190471,4.47005057426526,12.1767075509789,8.98510377387116,2.68658645196373,2.80455971816669,0,1.13641803165053,3.77351852628863,4.44905610798268,2.74608082076308,2.87338755150154,1.24349760466224,1.62640664988597,2.07085797312813,0.899606224327209,2.63947026689641,2.48823724704513,5.0509925766019,2.60872530905867,4.65798587891377,3.42724690951916,5.2893195316606,2.36403256963327,2.14821114084977,1.85613503951397,1.59238355479446,6.0004164699473,1.71697852591396,1.01024846629776,0,0.385239660814607,0.428883182749851,6.26386300716508,3.62729480819636,2.08370226891451,6.85262772618109,3.58177682162975,2.77921302444875,2.63140859494449,2.65033718918822,1.92914038270915,3.88567613502067,4.61234733458304,2.76344273384959,3.03859956177382,4.14775308455192,3.70234586794838,3.45448584814744,1.96278473107013,39.9684015592623,4.66968526632067,1.26787274015176,3.59977312538874,0.533458648470704,1.54993481694734,2.27006381426734,4.23443685579234,0.559518030877778,3.73246356019784,1.40683808434017,0.539124056983409,4.2461804301092,6.66178792971285,2.54598794931038,10.2035961648808,6.07285244869111,3.35186950783946,0.954013051960256,0.94634094001504,1.60114149657094,5.99549104274163,2.1437183414724,0.256916900385838,0,7.98169295285756,1.02558182120378,4.78936222821264,0.138314504928436,7.2664040534333,1.42769420259154,1.07962490351128,0.707818340086442,3.85200056895526,4.96760364446454,3.81382095467167,0,0.795664888465099,2.1058891937792,4.63921658018096,11.7227101684964,3.92860041722134,4.9131575253029,1.92212912082159,0,2.34323429584154,4.75379631952723,0.19024743058172,10.9394961803644,9.86863980342928,21.3370806707397,4.92439484206938,3.70511040154826,3.74991285114801,2.69026977775059,1.82089681270989,2.73194629621557,4.7899279887825,3.22655165156182,2.05785611324902,0,0.131545547125698,1.65471377237555,0.778619813244484,2.27629969266491,3.61365856806804,2.80272163313789,6.39211104356647,3.0229862770607,5.25526856675755,1.21510125100316,3.63431306985271,1.51113852978563,1.73858272302579,1.60342272946051,1.45051314914126,9.2187977630733,11.7514142508396,4.30227358820278,0,0.340853619036631,27.5201582624104,13.2881983755549,2.17144469965024,2.8666168169323,10.7381214525881,0.883352102537187,1.70685094975177,5.17943069750316,3.07988420568741,26.6757319207786,3.39997695141398,3.74303141539369,9.15173565742294,5.58924426654572,0.67767649223376,4.39762066981717,3.92503393273351,2.70109553377806,16.3919670377968,31.511258856222,1.22574160876953,4.71353094203252,7.06710481613803,2.67341760294377,11.8343603723352,0.849635573439084,4.32326022707326,0.257831551894309,0.999411559249289,1.2498775702396,3.52894871715692,1.5245859670942,5.11235471772562,13.3031492187317,10.0337708206016,0.315543124386369,0.135982980381829,7.85431242612679,22.2191273016468,2.60396512716726,2.77305377178851,3.02838593486652,1.13549782351571,2.07604586731021,6.96841755562903,0.61193297845189,4.00826107898341,5.42179907255585,9.27617895381788,2.80381183407486,1.60778478093707,3.31667775783512,5.68881477240424,1.27940389140589,6.66580408098473,7.16936899179668,1.05527014302958,1.56984607612859,3.69153518013356,15.7651407387411,3.9189014621453,7.87136592496146,0.740872583160463,2.438554983351,8.98182962674236,0.244209805832924,1.70763753404345,1.9307228228694,4.131959296903,4.69281884806909,0.977931553462932,10.9861968145249,1.99727032255654,5.23311863336668,3.20568492303233 | |||
|short_description=p1@SCARNA10 | |||
}} |
Latest revision as of 23:12, 19 September 2015
Short description: | p1@SCARNA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARNA10_5end |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | 0bp_to_ENST00000459255, NR_004387, uc009zeo.1_5end |
EntrezGene: | SCARNA10 |
HGNC: | 32567 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.81e-14 | 136 |
nongranular leukocyte | 7.63e-13 | 115 |
classical monocyte | 2.41e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.41e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 2.44e-11 | 120 |
defensive cell | 4.69e-11 | 48 |
phagocyte | 4.69e-11 | 48 |
hematopoietic stem cell | 1.75e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.19e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-08 | 161 |
hematopoietic cell | 1.31e-08 | 177 |
macrophage dendritic cell progenitor | 1.94e-08 | 61 |
monopoietic cell | 8.32e-08 | 59 |
monocyte | 8.32e-08 | 59 |
monoblast | 8.32e-08 | 59 |
promonocyte | 8.32e-08 | 59 |
myeloid leukocyte | 1.34e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.68e-07 | 98 |
blood island | 4.68e-07 | 98 |