FFCP PHASE1:Hg19::chr12:6619381..6619395,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6619381..6619395,+
|short_description=p1@SCARNA10
|description=CAGE_peak_1_at_SCARNA10_5end
|association_with_transcript=0bp_to_ENST00000459255,NR_004387,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=692148 | |EntrezGene=692148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32567 | |HGNC=32567 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000459255,NR_004387,uc009zeo.1_5end | |||
|cluster_id=chr12:6619381..6619395,+ | |||
|coexpression_cluster_id=C673 | |||
|description=CAGE_peak_1_at_SCARNA10_5end | |||
|id=chr12:6619381..6619395,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.45e-14!140;CL:0002087!3.30e-13!119;CL:0002057!1.63e-12!42;CL:0000860!8.20e-12!45;CL:0002031!1.18e-11!124;CL:0000037!8.63e-10!172;CL:0000566!8.63e-10!172;CL:0002032!5.85e-09!165;CL:0000837!5.85e-09!165;CL:0000988!6.84e-09!182;CL:0002009!2.09e-08!65;CL:0002194!8.55e-08!63;CL:0000576!8.55e-08!63;CL:0000040!8.55e-08!63;CL:0000559!8.55e-08!63;CL:0000766!1.44e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-09;33!CL:0002057;1.52e-09;33!CL:0000473;3.67e-07;39!CL:0000234;3.67e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.81e-14,136;CL:0002087,7.63e-13,115;CL:0000860,2.41e-12,42;CL:0002057,2.41e-12,42;CL:0002031,2.44e-11,120;CL:0000473,4.69e-11,48;CL:0000234,4.69e-11,48;CL:0000037,1.75e-09,168;CL:0002032,1.19e-08,161;CL:0000837,1.19e-08,161;CL:0000988,1.31e-08,177;CL:0002009,1.94e-08,61;CL:0002194,8.32e-08,59;CL:0000576,8.32e-08,59;CL:0000040,8.32e-08,59;CL:0000559,8.32e-08,59;CL:0000766,1.34e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-07!102;UBERON:0003061!3.82e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.68e-07,98;UBERON:0003061,4.68e-07,98 | |||
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| ||
|short_description=p1@SCARNA10 | |||
}} | }} |
Latest revision as of 23:12, 19 September 2015
Short description: | p1@SCARNA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARNA10_5end |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | 0bp_to_ENST00000459255, NR_004387, uc009zeo.1_5end |
EntrezGene: | SCARNA10 |
HGNC: | 32567 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.81e-14 | 136 |
nongranular leukocyte | 7.63e-13 | 115 |
classical monocyte | 2.41e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.41e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 2.44e-11 | 120 |
defensive cell | 4.69e-11 | 48 |
phagocyte | 4.69e-11 | 48 |
hematopoietic stem cell | 1.75e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.19e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-08 | 161 |
hematopoietic cell | 1.31e-08 | 177 |
macrophage dendritic cell progenitor | 1.94e-08 | 61 |
monopoietic cell | 8.32e-08 | 59 |
monocyte | 8.32e-08 | 59 |
monoblast | 8.32e-08 | 59 |
promonocyte | 8.32e-08 | 59 |
myeloid leukocyte | 1.34e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.68e-07 | 98 |
blood island | 4.68e-07 | 98 |