FFCP PHASE1:Hg19::chr17:38020607..38020621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKT9 | |UniProt=Q9UKT9 | ||
|association_with_transcript=-166bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2, | |association_with_transcript=-166bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc0 | ||
|cluster_id=chr17:38020607..38020621,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_9_at_IKZF3_5end | |description=CAGE_peak_9_at_IKZF3_5end | ||
|id=chr17:38020607..38020621,- | |id=chr17:38020607..38020621,- | ||
|ontology_enrichment_celltype=CL:0000542!3.07e-63!53;CL:0000051!3.07e-63!53;CL:0000838!9.36e-62!52;CL:0000945!2.73e-34!24;CL:0000826!2.73e-34!24;CL:0000738!5.46e-32!140;CL:0002087!8.40e-32!119;CL:0002031!5.27e-28!124;CL:0000988!5.79e-27!182;CL:0000037!1.14e-26!172;CL:0000566!1.14e-26!172;CL:0000791!1.84e-24!18;CL:0000789!1.84e-24!18;CL:0002420!1.84e-24!18;CL:0002419!1.84e-24!18;CL:0000790!1.84e-24!18;CL:0002032!2.53e-24!165;CL:0000837!2.53e-24!165;CL:0000084!4.16e-24!25;CL:0000827!4.16e-24!25;CL:0000236!3.95e-22!14;CL:0000625!4.38e-17!11;CL:0000080!1.25e-08!6;CL:0000624!4.41e-08!6 | |ontology_enrichment_celltype=CL:0000542!3.07e-63!53;CL:0000051!3.07e-63!53;CL:0000838!9.36e-62!52;CL:0000945!2.73e-34!24;CL:0000826!2.73e-34!24;CL:0000738!5.46e-32!140;CL:0002087!8.40e-32!119;CL:0002031!5.27e-28!124;CL:0000988!5.79e-27!182;CL:0000037!1.14e-26!172;CL:0000566!1.14e-26!172;CL:0000791!1.84e-24!18;CL:0000789!1.84e-24!18;CL:0002420!1.84e-24!18;CL:0002419!1.84e-24!18;CL:0000790!1.84e-24!18;CL:0002032!2.53e-24!165;CL:0000837!2.53e-24!165;CL:0000084!4.16e-24!25;CL:0000827!4.16e-24!25;CL:0000236!3.95e-22!14;CL:0000625!4.38e-17!11;CL:0000080!1.25e-08!6;CL:0000624!4.41e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.31e-45;24!CL:0000542;6.98e-40;53!CL:0000236;6.31e-33;13!CL:0000625;2.39e-30;11!CL:0000791;3.16e-24;18!CL:0000789;3.16e-24;18!CL:0002419;3.16e-24;18!CL:0000084;3.64e-19;25!CL:0002087;1.17e-12;104!CL:0000623;1.99e-09;3!CL:0000226;1.29e-08;3!CL:0000842;1.29e-08;3!CL:0000738;5.68e-07;136!CL:0000988;6.21e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.73e-71,53;CL:0000051,2.73e-71,53;CL:0000838,9.05e-69,52;CL:0000945,9.52e-46,24;CL:0000826,9.52e-46,24;CL:0002087,1.74e-35,115;CL:0000236,2.99e-35,14;CL:0000738,2.46e-33,136;CL:0000625,1.44e-30,11;CL:0002031,1.91e-28,120;CL:0000037,4.83e-26,168;CL:0000988,2.07e-25,177;CL:0000791,2.41e-24,18;CL:0000789,2.41e-24,18;CL:0002420,2.41e-24,18;CL:0002419,2.41e-24,18;CL:0000790,2.41e-24,18;CL:0002032,3.06e-22,161;CL:0000837,3.06e-22,161;CL:0000084,3.20e-19,25;CL:0000827,3.20e-19,25;CL:0000623,1.96e-09,3;CL:0000825,1.96e-09,3;CL:0000226,1.14e-08,3;CL:0000842,1.14e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.98e-40;53!CL:0000790;3.16e-24;18 | |||
|ontology_enrichment_disease=DOID:0060058!3.75e-09!10 | |ontology_enrichment_disease=DOID:0060058!3.75e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.73e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.03e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.62e-17!15;UBERON:0000179!8.62e-17!15;UBERON:0000463!8.62e-17!15;UBERON:0004177!1.17e-09!7;UBERON:0007023!1.88e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!8.62e-17!15;UBERON:0000179!8.62e-17!15;UBERON:0000463!8.62e-17!15;UBERON:0004177!1.17e-09!7;UBERON:0007023!1.88e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.58e-16;15!UBERON:0000179;4.58e-16;15!UBERON:0000463;4.58e-16;15!UBERON:0002390;9.29e-14;32!UBERON:0002193;3.02e-10;42!UBERON:0004177;5.69e-09;5!UBERON:0005057;5.69e-09;5!UBERON:0002106;5.72e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.74e-16,15;UBERON:0000179,3.74e-16,15;UBERON:0000463,3.74e-16,15;UBERON:0002106,7.15e-09,3;UBERON:0004854,7.15e-09,3;UBERON:0009034,7.15e-09,3;UBERON:0002095,7.15e-09,3;UBERON:0004782,7.15e-09,3;UBERON:0003281,7.15e-09,3;UBERON:0009664,7.15e-09,3;UBERON:0002296,7.15e-09,3;UBERON:0005602,7.15e-09,3;UBERON:0001179,7.15e-09,3;UBERON:0006293,7.15e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,2.13461532569859,2.44003422072406,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,4.7254992353984,2.84338464974843,0,0.553995408531877,1.20326668482085,0.434021741431704,0,1.29557466407592,0,0.145398238779565,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,15.8380197266018,14.2321480618169,7.68114400619713,9.20910770182829,9.19603903927173,8.59358334620321,12.4026988089597,8.53819453664173,11.1575065980478,10.7036503875064,1.32171328579026,1.12101712596307,0,1.7703879310245,0.786021525498329,1.02800749499755,0.167186495390678,0.651844533267181,0.473447805734733,1.94826728407911,1.55974639639243,0.883817722424512,0.221533894583621,0.270803863765016,3.33037431286755,0.910415432919148,0.164437904603676,0,1.44901542867526,0.444859689486181,1.07016331235885,0,1.81294948316106,0.383220493601921,0.34362744548263,1.51811815211702,4.14135038621326,3.90650072313851,3.8018081777935,1.80690142893327,2.55973222308837,6.24653632761729,3.55165878066025,6.56902397536837,4.23374160771938,6.41856469880418,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0084369390282,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,2.56139988262505,4.52817907204986,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.2942852049117,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,1.70894156152249,2.1440859791201,1.23408681925858,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,3.71606350251437,0.577076851905779,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3545300572164,0,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.707660516026713,0,1.48260564340311,0.741383633679017,0.626531697032732,0.067401132980677,0,0,4.01400536274465,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,3.96932817449561,1.18566979138767,7.30755590285376,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,2.41100971525142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.463044948647668,0,0,0,0,0,0,0,0,3.10146929333517,1.4180735354187,2.19870543034844,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.23806443146374,1.42095601639213,0.931120714437869,0,0,0,0,0,5.9269806652837,0.286888821570705,0,0,0,0,0,0,0,0,0,3.22038069745642,0.320568492303233 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| ||
|short_description=p9@IKZF3 | |short_description=p9@IKZF3 | ||
}} | }} |
Latest revision as of 23:10, 19 September 2015
Short description: | p9@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IKZF3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -166bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc0 |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | Q9UKT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.73e-71 | 53 |
common lymphoid progenitor | 2.73e-71 | 53 |
lymphoid lineage restricted progenitor cell | 9.05e-69 | 52 |
lymphocyte of B lineage | 9.52e-46 | 24 |
pro-B cell | 9.52e-46 | 24 |
nongranular leukocyte | 1.74e-35 | 115 |
B cell | 2.99e-35 | 14 |
leukocyte | 2.46e-33 | 136 |
CD8-positive, alpha-beta T cell | 1.44e-30 | 11 |
hematopoietic lineage restricted progenitor cell | 1.91e-28 | 120 |
hematopoietic stem cell | 4.83e-26 | 168 |
hematopoietic cell | 2.07e-25 | 177 |
mature alpha-beta T cell | 2.41e-24 | 18 |
alpha-beta T cell | 2.41e-24 | 18 |
immature T cell | 2.41e-24 | 18 |
mature T cell | 2.41e-24 | 18 |
immature alpha-beta T cell | 2.41e-24 | 18 |
hematopoietic oligopotent progenitor cell | 3.06e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.06e-22 | 161 |
T cell | 3.20e-19 | 25 |
pro-T cell | 3.20e-19 | 25 |
natural killer cell | 1.96e-09 | 3 |
pro-NK cell | 1.96e-09 | 3 |
single nucleate cell | 1.14e-08 | 3 |
mononuclear cell | 1.14e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.74e-16 | 15 |
haemolymphatic fluid | 3.74e-16 | 15 |
organism substance | 3.74e-16 | 15 |
spleen | 7.15e-09 | 3 |
gastrointestinal system mesentery | 7.15e-09 | 3 |
stomach region | 7.15e-09 | 3 |
mesentery | 7.15e-09 | 3 |
gastrointestinal system serosa | 7.15e-09 | 3 |
mesentery of stomach | 7.15e-09 | 3 |
gut mesentery | 7.15e-09 | 3 |
dorsal mesentery | 7.15e-09 | 3 |
dorsal mesogastrium | 7.15e-09 | 3 |
peritoneal cavity | 7.15e-09 | 3 |
spleen primordium | 7.15e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.03e-10 | 10 |